RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 TMCO5AQ8N6Q1 288 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 GOLPH3LQ9H4A5 285 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 KLC4Q9NSK0 619 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 ZNF667Q5HYK9 610 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 PATL1Q86TB9 770 aaKnown RBP17.05■□□□□ 0.32
COL18A1-203ENST00000359759 NDUFAF2Q8N183 169 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 GPR101Q96P66 508 aaPredicted RBP17.05■□□□□ 0.32
COL18A1-203ENST00000359759 SEL1LQ9UBV2 794 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 TRAPPC8Q9Y2L5 1435 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 HIF1AQ16665 826 aa17.04■□□□□ 0.32
COL18A1-203ENST00000359759 RARS2Q5T160 578 aaKnown RBP17.04■□□□□ 0.32
COL18A1-203ENST00000359759 BTN2A2Q8WVV5 523 aa17.04■□□□□ 0.32
COL18A1-203ENST00000359759 ZNF668Q96K58 619 aaPredicted RBP17.04■□□□□ 0.32
COL18A1-203ENST00000359759 FAM213AQ9BRX8 229 aa17.04■□□□□ 0.32
COL18A1-203ENST00000359759 UNC45AQ9H3U1 944 aa17.04■□□□□ 0.32
COL18A1-203ENST00000359759 XDHP47989 1333 aa17.04■□□□□ 0.32
COL18A1-203ENST00000359759 NEMP1O14524 444 aa17.04■□□□□ 0.32
COL18A1-203ENST00000359759 NBPF9Q3BBW0 867 aa17.04■□□□□ 0.32
COL18A1-203ENST00000359759 NUP93Q8N1F7 819 aa17.04■□□□□ 0.32
COL18A1-203ENST00000359759 AFG1LQ8WV93 481 aa17.04■□□□□ 0.32
COL18A1-203ENST00000359759 OSBP2Q969R2 916 aa17.04■□□□□ 0.32
COL18A1-203ENST00000359759 M0QYV0 167 aa17.04■□□□□ 0.32
COL18A1-203ENST00000359759 PIK3R2O00459 728 aa17.04■□□□□ 0.32
COL18A1-203ENST00000359759 KCNA2P16389 499 aa17.04■□□□□ 0.32
COL18A1-203ENST00000359759 ZNF699Q32M78 642 aa17.04■□□□□ 0.32
COL18A1-203ENST00000359759 EHD2Q9NZN4 543 aa17.04■□□□□ 0.32
COL18A1-203ENST00000359759 ZMYM3Q14202 1370 aa17.04■□□□□ 0.32
COL18A1-203ENST00000359759 LOC102724159A0A0B4J2E5 919 aa17.04■□□□□ 0.32
COL18A1-203ENST00000359759 USP14P54578 494 aa17.04■□□□□ 0.32
COL18A1-203ENST00000359759 PWP2Q15269 919 aaKnown RBP17.04■□□□□ 0.32
COL18A1-203ENST00000359759 ZC3H15Q8WU90 426 aaKnown RBP17.04■□□□□ 0.32
COL18A1-203ENST00000359759 CCDC17Q96LX7 622 aa17.04■□□□□ 0.32
COL18A1-203ENST00000359759 HPCAL4Q9UM19 191 aa17.04■□□□□ 0.32
COL18A1-203ENST00000359759 POTEMA6NI47 508 aa17.04■□□□□ 0.32
COL18A1-203ENST00000359759 APOA1P02647 267 aa17.04■□□□□ 0.32
COL18A1-203ENST00000359759 CCNA1P78396 465 aa17.04■□□□□ 0.32
COL18A1-203ENST00000359759 SFR1Q86XK3 245 aa17.04■□□□□ 0.32
COL18A1-203ENST00000359759 ROR1Q01973 937 aa17.03■□□□□ 0.32
COL18A1-203ENST00000359759 SURF1Q15526 300 aa17.03■□□□□ 0.32
COL18A1-203ENST00000359759 GJC2Q5T442 439 aaPredicted RBP17.03■□□□□ 0.32
COL18A1-203ENST00000359759 ZNF467Q7Z7K2 595 aaPredicted RBP17.03■□□□□ 0.32
COL18A1-203ENST00000359759 KLHL11Q9NVR0 708 aa17.03■□□□□ 0.32
COL18A1-203ENST00000359759 PRCPP42785 496 aa17.03■□□□□ 0.32
COL18A1-203ENST00000359759 CYGBQ8WWM9 190 aa17.03■□□□□ 0.32
COL18A1-203ENST00000359759 BRIP1Q9BX63 1249 aa17.03■□□□□ 0.32
COL18A1-203ENST00000359759 PRAMEF22A3QJZ6 481 aa17.03■□□□□ 0.32
COL18A1-203ENST00000359759 DFFAO00273 331 aa17.03■□□□□ 0.32
COL18A1-203ENST00000359759 STK25O00506 426 aa17.03■□□□□ 0.32
COL18A1-203ENST00000359759 ARHGEF25Q86VW2 580 aa17.03■□□□□ 0.32
COL18A1-203ENST00000359759 TCP11X1B4DZS4 312 aa17.03■□□□□ 0.32
COL18A1-203ENST00000359759 PGM1P36871 562 aa17.03■□□□□ 0.32
COL18A1-203ENST00000359759 SNF8Q96H20 258 aa17.03■□□□□ 0.32
COL18A1-203ENST00000359759 ZNF212Q9UDV6 495 aa17.03■□□□□ 0.32
COL18A1-203ENST00000359759 KDM5AP29375 1690 aaKnown RBP17.03■□□□□ 0.32
COL18A1-203ENST00000359759 ATP10DQ9P241 1426 aa17.02■□□□□ 0.32
COL18A1-203ENST00000359759 PRAMEP78395 509 aa17.02■□□□□ 0.32
COL18A1-203ENST00000359759 DEPDC1Q5TB30 811 aa17.02■□□□□ 0.32
COL18A1-203ENST00000359759 LONP2Q86WA8 852 aa17.02■□□□□ 0.32
COL18A1-203ENST00000359759 SH3KBP1Q96B97 665 aa17.02■□□□□ 0.32
COL18A1-203ENST00000359759 GFAPP14136 432 aa17.02■□□□□ 0.32
COL18A1-203ENST00000359759 CRKLP46109 303 aaKnown RBP17.02■□□□□ 0.32
COL18A1-203ENST00000359759 NFX1Q12986 1120 aaKnown RBP17.02■□□□□ 0.32
COL18A1-203ENST00000359759 SLFNL1Q499Z3 407 aa17.02■□□□□ 0.32
COL18A1-203ENST00000359759 TMA16Q96EY4 203 aaKnown RBP17.02■□□□□ 0.32
COL18A1-203ENST00000359759 PNMA6FA0A0J9YX94 578 aa17.02■□□□□ 0.32
COL18A1-203ENST00000359759 SLC16A4O15374 487 aa17.02■□□□□ 0.32
COL18A1-203ENST00000359759 MEFVO15553 781 aaPredicted RBP17.02■□□□□ 0.32
COL18A1-203ENST00000359759 CIAO1O76071 339 aa17.02■□□□□ 0.32
COL18A1-203ENST00000359759 KRT8P05787 483 aa17.02■□□□□ 0.32
COL18A1-203ENST00000359759 MAP4P27816 1152 aaKnown RBP17.02■□□□□ 0.32
COL18A1-203ENST00000359759 CNGA3Q16281 694 aa17.02■□□□□ 0.32
COL18A1-203ENST00000359759 ACCSLQ4AC99 568 aa17.02■□□□□ 0.32
COL18A1-203ENST00000359759 PPP4R3CPQ6ZMV5 832 aa17.02■□□□□ 0.32
COL18A1-203ENST00000359759 IL17RAQ96F46 866 aa17.02■□□□□ 0.32
COL18A1-203ENST00000359759 ATP9BO43861 1147 aa17.02■□□□□ 0.31
COL18A1-203ENST00000359759 IL10P22301 178 aa17.02■□□□□ 0.31
COL18A1-203ENST00000359759 PLD3Q8IV08 490 aa17.02■□□□□ 0.31
COL18A1-203ENST00000359759 ENAHQ8N8S7 591 aaPredicted RBP17.02■□□□□ 0.31
COL18A1-203ENST00000359759 ATP6V1G3Q96LB4 118 aa17.02■□□□□ 0.31
COL18A1-203ENST00000359759 KANSL2Q9H9L4 492 aa17.02■□□□□ 0.31
COL18A1-203ENST00000359759 CYP26B1Q9NR63 512 aa17.02■□□□□ 0.31
COL18A1-203ENST00000359759 STAP2Q9UGK3 403 aa17.02■□□□□ 0.31
COL18A1-203ENST00000359759 E2F8A0AVK6 867 aa17.02■□□□□ 0.31
COL18A1-203ENST00000359759 MOCS2O96007 188 aaPredicted RBP17.02■□□□□ 0.31
COL18A1-203ENST00000359759 NR3C1P04150 777 aa17.02■□□□□ 0.31
COL18A1-203ENST00000359759 THEM5Q8N1Q8 247 aa17.02■□□□□ 0.31
COL18A1-203ENST00000359759 ADORA2BP29275 332 aa17.01■□□□□ 0.31
COL18A1-203ENST00000359759 GPC3P51654 580 aa17.01■□□□□ 0.31
COL18A1-203ENST00000359759 KRT72Q14CN4 511 aa17.01■□□□□ 0.31
COL18A1-203ENST00000359759 FBXW10Q5XX13 1052 aa17.01■□□□□ 0.31
COL18A1-203ENST00000359759 HEATR6Q6AI08 1181 aaKnown RBP17.01■□□□□ 0.31
COL18A1-203ENST00000359759 RRM2BQ7LG56 351 aa17.01■□□□□ 0.31
COL18A1-203ENST00000359759 ZNF280CQ8ND82 737 aa17.01■□□□□ 0.31
COL18A1-203ENST00000359759 HIC1Q14526 733 aa17.01■□□□□ 0.31
COL18A1-203ENST00000359759 AARS2Q5JTZ9 985 aaKnown RBP17.01■□□□□ 0.31
COL18A1-203ENST00000359759 CCDC137Q6PK04 289 aaKnown RBP17.01■□□□□ 0.31
COL18A1-203ENST00000359759 PBXIP1Q96AQ6 731 aa17.01■□□□□ 0.31
COL18A1-203ENST00000359759 THAP11Q96EK4 314 aa17.01■□□□□ 0.31
COL18A1-203ENST00000359759 ATP1A1P05023 1023 aaKnown RBP17.01■□□□□ 0.31
COL18A1-203ENST00000359759 ABCD1P33897 745 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms