RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 CACNB3P54284 484 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 YWHAGP61981 247 aaKnown RBP eCLIP17.17■□□□□ 0.34
NPHP3-201ENST00000337331 BLMHQ13867 455 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 Q4G0T1 1027 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 TTBK2Q6IQ55 1244 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 SRRM1Q8IYB3 904 aaKnown RBP17.17■□□□□ 0.34
NPHP3-201ENST00000337331 AS3MTQ9HBK9 375 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 GALNT8Q9NY28 637 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 HESX1Q9UBX0 185 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 A0A1W2PQC6 194 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 FAM205CA6NFA0 338 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 CYP19A1P11511 503 aaPredicted RBP17.17■□□□□ 0.34
NPHP3-201ENST00000337331 HSPA6P17066 643 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 SERPINB6P35237 376 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 CCDC125Q86Z20 511 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 SLC7A3Q8WY07 619 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 CCT6BQ92526 530 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 EPAS1Q99814 870 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 TMEM206Q9H813 350 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 MAD1L1Q9Y6D9 718 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 E9PMD0 336 aa17.16■□□□□ 0.34
NPHP3-201ENST00000337331 CRCPO75575 148 aa17.16■□□□□ 0.34
NPHP3-201ENST00000337331 LRRC36Q1X8D7 754 aa17.16■□□□□ 0.34
NPHP3-201ENST00000337331 TMCO4Q5TGY1 634 aa17.16■□□□□ 0.34
NPHP3-201ENST00000337331 RNF220Q5VTB9 566 aa17.16■□□□□ 0.34
NPHP3-201ENST00000337331 METTL5Q9NRN9 209 aaKnown RBP17.16■□□□□ 0.34
NPHP3-201ENST00000337331 H7C0C1 242 aa17.16■□□□□ 0.34
NPHP3-201ENST00000337331 ESRRAP11474 423 aaPredicted RBP17.16■□□□□ 0.34
NPHP3-201ENST00000337331 ATP5OP48047 213 aa17.16■□□□□ 0.34
NPHP3-201ENST00000337331 ITIH4Q14624 930 aa17.16■□□□□ 0.34
NPHP3-201ENST00000337331 PTPAQ15257 358 aa17.16■□□□□ 0.34
NPHP3-201ENST00000337331 DCAF15Q66K64 600 aa17.16■□□□□ 0.34
NPHP3-201ENST00000337331 PPP4R3CPQ6ZMV5 832 aa17.16■□□□□ 0.34
NPHP3-201ENST00000337331 CLMNQ96JQ2 1002 aa17.16■□□□□ 0.34
NPHP3-201ENST00000337331 OLFM3Q96PB7 478 aa17.16■□□□□ 0.34
NPHP3-201ENST00000337331 FAM129AQ9BZQ8 928 aa17.16■□□□□ 0.34
NPHP3-201ENST00000337331 ANGPTL2Q9UKU9 493 aa17.16■□□□□ 0.34
NPHP3-201ENST00000337331 PVALEFA0A1B0GWK0 134 aa17.16■□□□□ 0.34
NPHP3-201ENST00000337331 MGRN1O60291 552 aa17.16■□□□□ 0.34
NPHP3-201ENST00000337331 GMNNO75496 209 aa17.16■□□□□ 0.34
NPHP3-201ENST00000337331 FESP07332 822 aa17.16■□□□□ 0.34
NPHP3-201ENST00000337331 KCTD19Q17RG1 926 aaPredicted RBP17.16■□□□□ 0.34
NPHP3-201ENST00000337331 CEP95Q96GE4 821 aa17.16■□□□□ 0.34
NPHP3-201ENST00000337331 ISCUQ9H1K1 167 aa17.16■□□□□ 0.34
NPHP3-201ENST00000337331 TSPYL2Q9H2G4 693 aaPredicted RBP17.16■□□□□ 0.34
NPHP3-201ENST00000337331 NRKQ7Z2Y5 1582 aa17.16■□□□□ 0.34
NPHP3-201ENST00000337331 GOLGA8SH3BPF8 625 aa17.15■□□□□ 0.34
NPHP3-201ENST00000337331 SGK1O00141 431 aa17.15■□□□□ 0.34
NPHP3-201ENST00000337331 GIPC1O14908 333 aa17.15■□□□□ 0.34
NPHP3-201ENST00000337331 TARSP26639 723 aaKnown RBP17.15■□□□□ 0.34
NPHP3-201ENST00000337331 NT5C2P49902 561 aa17.15■□□□□ 0.34
NPHP3-201ENST00000337331 TRIP13Q15645 432 aaPredicted RBP17.15■□□□□ 0.34
NPHP3-201ENST00000337331 FAM83BQ5T0W9 1011 aa17.15■□□□□ 0.34
NPHP3-201ENST00000337331 FLAD1Q8NFF5 587 aa17.15■□□□□ 0.34
NPHP3-201ENST00000337331 MOV10L1Q9BXT6 1211 aaKnown RBP17.15■□□□□ 0.34
NPHP3-201ENST00000337331 GOLPH3Q9H4A6 298 aa17.15■□□□□ 0.34
NPHP3-201ENST00000337331 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.15■□□□□ 0.34
NPHP3-201ENST00000337331 DCTN4Q9UJW0 460 aa17.15■□□□□ 0.34
NPHP3-201ENST00000337331 TMCC1O94876 653 aa17.15■□□□□ 0.34
NPHP3-201ENST00000337331 GCLCP48506 637 aaPredicted RBP17.15■□□□□ 0.34
NPHP3-201ENST00000337331 ATP2C1P98194 919 aaPredicted RBP17.15■□□□□ 0.34
NPHP3-201ENST00000337331 LMNB2Q03252 620 aa17.15■□□□□ 0.34
NPHP3-201ENST00000337331 TRIM51Q9BSJ1 452 aa17.15■□□□□ 0.34
NPHP3-201ENST00000337331 ADGRB3O60242 1522 aa17.15■□□□□ 0.34
NPHP3-201ENST00000337331 GOLGA8IPA6NC78 632 aa17.15■□□□□ 0.34
NPHP3-201ENST00000337331 GOLGA8JA6NMD2 632 aa17.15■□□□□ 0.34
NPHP3-201ENST00000337331 PPP1R3GB7ZBB8 358 aa17.15■□□□□ 0.34
NPHP3-201ENST00000337331 DCTN3O75935 186 aa17.15■□□□□ 0.34
NPHP3-201ENST00000337331 GSTA2P09210 222 aa17.15■□□□□ 0.34
NPHP3-201ENST00000337331 SLC12A2P55011 1212 aa17.15■□□□□ 0.34
NPHP3-201ENST00000337331 PPP1R15BQ5SWA1 713 aa17.15■□□□□ 0.34
NPHP3-201ENST00000337331 APLFQ8IW19 511 aaPredicted RBP17.15■□□□□ 0.34
NPHP3-201ENST00000337331 HIPK4Q8NE63 616 aa17.15■□□□□ 0.34
NPHP3-201ENST00000337331 GABPB2Q8TAK5 448 aaPredicted RBP17.15■□□□□ 0.34
NPHP3-201ENST00000337331 ADPGKQ9BRR6 497 aa17.15■□□□□ 0.34
NPHP3-201ENST00000337331 CELF4Q9BZC1 486 aaKnown RBP17.15■□□□□ 0.34
NPHP3-201ENST00000337331 TMEM260Q9NX78 707 aa17.15■□□□□ 0.34
NPHP3-201ENST00000337331 CSADQ9Y600 493 aa17.15■□□□□ 0.34
NPHP3-201ENST00000337331 GRID2IPA4D2P6 1211 aa17.14■□□□□ 0.34
NPHP3-201ENST00000337331 SMNDC1O75940 238 aaKnown RBP eCLIP17.14■□□□□ 0.34
NPHP3-201ENST00000337331 GSTT1P30711 240 aa17.14■□□□□ 0.34
NPHP3-201ENST00000337331 KCNH2Q12809 1159 aa17.14■□□□□ 0.34
NPHP3-201ENST00000337331 NMD3Q96D46 503 aaKnown RBP17.14■□□□□ 0.34
NPHP3-201ENST00000337331 HSD3B7Q9H2F3 369 aa17.14■□□□□ 0.34
NPHP3-201ENST00000337331 NRBP2Q9NSY0 501 aa17.14■□□□□ 0.34
NPHP3-201ENST00000337331 ANAPC5Q9UJX4 755 aa17.14■□□□□ 0.34
NPHP3-201ENST00000337331 CPDO75976 1380 aa17.14■□□□□ 0.33
NPHP3-201ENST00000337331 MAGEA13PA6NCF6 341 aa17.14■□□□□ 0.33
NPHP3-201ENST00000337331 ZNF844Q08AG5 666 aa17.14■□□□□ 0.33
NPHP3-201ENST00000337331 TMED2Q15363 201 aa17.14■□□□□ 0.33
NPHP3-201ENST00000337331 LCA5Q86VQ0 697 aa17.14■□□□□ 0.33
NPHP3-201ENST00000337331 SFR1Q86XK3 245 aa17.14■□□□□ 0.33
NPHP3-201ENST00000337331 AGGF1Q8N302 714 aaeCLIP17.14■□□□□ 0.33
NPHP3-201ENST00000337331 RBM41Q96IZ5 413 aaKnown RBP17.14■□□□□ 0.33
NPHP3-201ENST00000337331 HAO1Q9UJM8 370 aa17.14■□□□□ 0.33
NPHP3-201ENST00000337331 A8MUI8 341 aa17.14■□□□□ 0.33
NPHP3-201ENST00000337331 ATP9AO75110 1047 aa17.14■□□□□ 0.33
NPHP3-201ENST00000337331 FGFR4P22455 802 aa17.14■□□□□ 0.33
NPHP3-201ENST00000337331 VHLP40337 213 aa17.14■□□□□ 0.33
NPHP3-201ENST00000337331 ZFP69BQ9UJL9 534 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms