RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 ZNF394Q53GI3 561 aa18.27■□□□□ 0.52
TRAPPC11-201ENST00000334690 HPS3Q969F9 1004 aa18.27■□□□□ 0.52
TRAPPC11-201ENST00000334690 PACSIN2Q9UNF0 486 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC11-201ENST00000334690 MYMKA6NI61 221 aa18.27■□□□□ 0.52
TRAPPC11-201ENST00000334690 MYBL1P10243 752 aa18.27■□□□□ 0.52
TRAPPC11-201ENST00000334690 TRIM59Q8IWR1 403 aa18.27■□□□□ 0.52
TRAPPC11-201ENST00000334690 CLTCQ00610 1675 aaKnown RBP18.27■□□□□ 0.52
TRAPPC11-201ENST00000334690 A0A0G2JLW4 131 aa18.27■□□□□ 0.51
TRAPPC11-201ENST00000334690 CNGA1P29973 690 aa18.27■□□□□ 0.51
TRAPPC11-201ENST00000334690 ZNF746Q6NUN9 644 aaPredicted RBP18.27■□□□□ 0.51
TRAPPC11-201ENST00000334690 RHOT1Q8IXI2 618 aa18.27■□□□□ 0.51
TRAPPC11-201ENST00000334690 TIPINQ9BVW5 301 aa18.27■□□□□ 0.51
TRAPPC11-201ENST00000334690 ZWILCHQ9H900 591 aa18.27■□□□□ 0.51
TRAPPC11-201ENST00000334690 ZNF699Q32M78 642 aa18.27■□□□□ 0.51
TRAPPC11-201ENST00000334690 KCTD17Q8N5Z5 321 aa18.27■□□□□ 0.51
TRAPPC11-201ENST00000334690 SMYD2Q9NRG4 433 aa18.27■□□□□ 0.51
TRAPPC11-201ENST00000334690 GABBR1Q9UBS5 961 aa18.27■□□□□ 0.51
TRAPPC11-201ENST00000334690 DIP2AQ14689 1571 aa18.26■□□□□ 0.51
TRAPPC11-201ENST00000334690 ESRRAP11474 423 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC11-201ENST00000334690 RBBP5Q15291 538 aaKnown RBP18.26■□□□□ 0.51
TRAPPC11-201ENST00000334690 RNPC3Q96LT9 517 aaKnown RBP18.26■□□□□ 0.51
TRAPPC11-201ENST00000334690 LRRC1Q9BTT6 524 aa18.26■□□□□ 0.51
TRAPPC11-201ENST00000334690 CCDC137Q6PK04 289 aaKnown RBP18.26■□□□□ 0.51
TRAPPC11-201ENST00000334690 LDHDQ86WU2 507 aa18.26■□□□□ 0.51
TRAPPC11-201ENST00000334690 PCDHA10Q9Y5I2 948 aa18.26■□□□□ 0.51
TRAPPC11-201ENST00000334690 MARK3P27448 753 aa18.26■□□□□ 0.51
TRAPPC11-201ENST00000334690 TNFAIP2Q03169 654 aa18.26■□□□□ 0.51
TRAPPC11-201ENST00000334690 RASIP1Q5U651 963 aa18.26■□□□□ 0.51
TRAPPC11-201ENST00000334690 MMS22LQ6ZRQ5 1243 aa18.26■□□□□ 0.51
TRAPPC11-201ENST00000334690 HDAC11Q96DB2 347 aa18.26■□□□□ 0.51
TRAPPC11-201ENST00000334690 STK33Q9BYT3 514 aa18.26■□□□□ 0.51
TRAPPC11-201ENST00000334690 RGL1Q9NZL6 768 aa18.26■□□□□ 0.51
TRAPPC11-201ENST00000334690 A0A1W2PQJ5 194 aa18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 PSMD14O00487 310 aa18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 KRT38O76015 456 aa18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 KRT7P08729 469 aa18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 PDHBP11177 359 aa18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 UCHL3P15374 230 aa18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 SPP2Q13103 211 aa18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 SRRM1Q8IYB3 904 aaKnown RBP18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 C2orf40Q9H1Z8 148 aa18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 ASNSD1Q9NWL6 643 aa18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 ZHX2Q9Y6X8 837 aa18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 TRIM55Q9BYV6 548 aa18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 EPS15L1Q9UBC2 864 aa18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 WDR91A4D1P6 747 aa18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 STX1BP61266 288 aa18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 CEP120Q8N960 986 aa18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 MTRQ99707 1265 aa18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 AGPAT1Q99943 283 aa18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 TMEM60Q9H2L4 133 aa18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 KCND2Q9NZV8 630 aa18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 PIM2Q9P1W9 311 aa18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 TOM1L1O75674 476 aa18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 ATP5HO75947 161 aa18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 RPSAP08865 295 aaKnown RBP18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 NMT1P30419 496 aaKnown RBP18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 TBC1D1Q86TI0 1168 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 TTC39CQ8N584 583 aa18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 ERGIC2Q96RQ1 377 aa18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 TOPORSQ9NS56 1045 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 IP6K2Q9UHH9 426 aa18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 AMACRQ9UHK6 382 aa18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 FBXL5Q9UKA1 691 aa18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 HPSEQ9Y251 543 aa18.25■□□□□ 0.51
TRAPPC11-201ENST00000334690 NDUFB10O96000 172 aa18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 SKIP12755 728 aa18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 KLHL38Q2WGJ6 581 aa18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 SWSAP1Q6NVH7 229 aa18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 PASD1Q8IV76 773 aa18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 FUCA2Q9BTY2 467 aa18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 FGFR1OP2Q9NVK5 253 aa18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 PNMA3Q9UL41 463 aa18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 PITPNM2Q9BZ72 1349 aa18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 CHUKO15111 745 aa18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 BRAFP15056 766 aa18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 PHKA2P46019 1235 aa18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 ZNF568Q3ZCX4 644 aa18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 SPOUT1Q5T280 376 aaKnown RBP18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 STRIP1Q5VSL9 837 aa18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 CATSPER4Q7RTX7 472 aa18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 RNF25Q96BH1 459 aaPredicted RBP18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 FAF2Q96CS3 445 aa18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 WRNIP1Q96S55 665 aa18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 UBE4BO95155 1302 aa18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 ANKRD65E5RJM6 399 aa18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 KIAA0391O15091 583 aaKnown RBP18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 ZNF18P17022 549 aa18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 GNA15P30679 374 aa18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 FXR2P51116 673 aaKnown RBP eCLIP18.24■□□□□ 0.514e-9■■□□□ 13.6
TRAPPC11-201ENST00000334690 ARL13BQ3SXY8 428 aa18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 HHIPL2Q6UWX4 724 aa18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 CCNI2Q6ZMN8 369 aaPredicted RBP18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 RAB44Q7Z6P3 723 aaPredicted RBP18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 SAAL1Q96ER3 474 aa18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 L2HGDHQ9H9P8 463 aa18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 SLC12A6Q9UHW9 1150 aa18.24■□□□□ 0.51
TRAPPC11-201ENST00000334690 PPP1R3GB7ZBB8 358 aa18.23■□□□□ 0.51
TRAPPC11-201ENST00000334690 AP3M2P53677 418 aa18.23■□□□□ 0.51
TRAPPC11-201ENST00000334690 GRIN1Q05586 938 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms