RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 RFX3P48380 749 aa17.41■□□□□ 0.38
PTCH1-201ENST00000331920 ANGPT2O15123 496 aa17.4■□□□□ 0.38
PTCH1-201ENST00000331920 DLGAP3O95886 979 aa17.4■□□□□ 0.38
PTCH1-201ENST00000331920 ITGAXP20702 1163 aa17.4■□□□□ 0.38
PTCH1-201ENST00000331920 CENPPQ6IPU0 288 aa17.4■□□□□ 0.38
PTCH1-201ENST00000331920 HES6Q96HZ4 224 aa17.4■□□□□ 0.38
PTCH1-201ENST00000331920 OLFM3Q96PB7 478 aa17.4■□□□□ 0.38
PTCH1-201ENST00000331920 FAM81BQ96LP2 452 aa17.4■□□□□ 0.38
PTCH1-201ENST00000331920 PCDHA7Q9UN72 937 aa17.4■□□□□ 0.38
PTCH1-201ENST00000331920 DMTNQ08495 405 aa17.4■□□□□ 0.38
PTCH1-201ENST00000331920 P2RX5Q93086 422 aa17.4■□□□□ 0.38
PTCH1-201ENST00000331920 TARSL2A2RTX5 802 aaKnown RBP17.4■□□□□ 0.38
PTCH1-201ENST00000331920 FMNL1O95466 1100 aaPredicted RBP17.4■□□□□ 0.38
PTCH1-201ENST00000331920 TRIM25Q14258 630 aaKnown RBP17.4■□□□□ 0.38
PTCH1-201ENST00000331920 LRRC14Q15048 493 aa17.4■□□□□ 0.38
PTCH1-201ENST00000331920 TMEM191CA6NGB0 347 aa17.4■□□□□ 0.38
PTCH1-201ENST00000331920 RNF103O00237 685 aa17.4■□□□□ 0.38
PTCH1-201ENST00000331920 EIF3BP55884 814 aaKnown RBP17.4■□□□□ 0.38
PTCH1-201ENST00000331920 CHSY1Q86X52 802 aa17.4■□□□□ 0.38
PTCH1-201ENST00000331920 URGCPQ8TCY9 931 aa17.4■□□□□ 0.38
PTCH1-201ENST00000331920 TUBGCP3Q96CW5 907 aa17.4■□□□□ 0.38
PTCH1-201ENST00000331920 KRT38O76015 456 aa17.4■□□□□ 0.38
PTCH1-201ENST00000331920 TWF2Q6IBS0 349 aaKnown RBP17.4■□□□□ 0.38
PTCH1-201ENST00000331920 DTX3LQ8TDB6 740 aa17.4■□□□□ 0.38
PTCH1-201ENST00000331920 UTP6Q9NYH9 597 aaKnown RBP17.4■□□□□ 0.38
PTCH1-201ENST00000331920 LMTK3Q96Q04 1460 aa17.4■□□□□ 0.38
PTCH1-201ENST00000331920 VAMP4O75379 141 aa17.4■□□□□ 0.38
PTCH1-201ENST00000331920 GPS1Q13098 491 aa17.4■□□□□ 0.38
PTCH1-201ENST00000331920 APOA5Q6Q788 366 aa17.4■□□□□ 0.38
PTCH1-201ENST00000331920 GALNT4Q8N4A0 578 aa17.4■□□□□ 0.38
PTCH1-201ENST00000331920 K7ERI5 159 aa17.39■□□□□ 0.38
PTCH1-201ENST00000331920 RHOBTB1O94844 696 aa17.39■□□□□ 0.38
PTCH1-201ENST00000331920 TCN1P20061 433 aaPredicted RBP17.39■□□□□ 0.38
PTCH1-201ENST00000331920 CLK1P49759 484 aaKnown RBP17.39■□□□□ 0.38
PTCH1-201ENST00000331920 MAGOHP61326 146 aaKnown RBP17.39■□□□□ 0.38
PTCH1-201ENST00000331920 KDSRQ06136 332 aa17.39■□□□□ 0.38
PTCH1-201ENST00000331920 E4F1Q66K89 784 aaPredicted RBP17.39■□□□□ 0.38
PTCH1-201ENST00000331920 ZBTB40Q9NUA8 1239 aa17.39■□□□□ 0.38
PTCH1-201ENST00000331920 PYCARDQ9ULZ3 195 aa17.39■□□□□ 0.38
PTCH1-201ENST00000331920 YTHDC2Q9H6S0 1430 aaKnown RBP17.39■□□□□ 0.37
PTCH1-201ENST00000331920 MXI1P50539 228 aa17.39■□□□□ 0.37
PTCH1-201ENST00000331920 GSPT2Q8IYD1 628 aaKnown RBP17.39■□□□□ 0.37
PTCH1-201ENST00000331920 STOML1Q9UBI4 398 aa17.39■□□□□ 0.37
PTCH1-201ENST00000331920 RASSF9O75901 435 aa17.39■□□□□ 0.37
PTCH1-201ENST00000331920 C6orf10Q5SRN2 563 aa17.39■□□□□ 0.37
PTCH1-201ENST00000331920 MIGA2Q7L4E1 593 aa17.39■□□□□ 0.37
PTCH1-201ENST00000331920 ZNF274Q96GC6 653 aaPredicted RBP17.39■□□□□ 0.37
PTCH1-201ENST00000331920 ATP9BO43861 1147 aa17.39■□□□□ 0.37
PTCH1-201ENST00000331920 MAN2A1Q16706 1144 aa17.39■□□□□ 0.37
PTCH1-201ENST00000331920 SIKE1Q9BRV8 207 aa17.39■□□□□ 0.37
PTCH1-201ENST00000331920 PCSK1NQ9UHG2 260 aa17.39■□□□□ 0.37
PTCH1-201ENST00000331920 COQ7Q99807 217 aa17.39■□□□□ 0.37
PTCH1-201ENST00000331920 DDX5P17844 614 aaKnown RBP17.39■□□□□ 0.37
PTCH1-201ENST00000331920 FLT3P36888 993 aa17.39■□□□□ 0.37
PTCH1-201ENST00000331920 PSMC5P62195 406 aa17.39■□□□□ 0.37
PTCH1-201ENST00000331920 GINS4Q9BRT9 223 aa17.39■□□□□ 0.37
PTCH1-201ENST00000331920 PARD6BQ9BYG5 372 aa17.39■□□□□ 0.37
PTCH1-201ENST00000331920 ZC3H7BQ9UGR2 993 aaKnown RBP17.38■□□□□ 0.37
PTCH1-201ENST00000331920 GGT7Q9UJ14 662 aa17.38■□□□□ 0.37
PTCH1-201ENST00000331920 HOXA13P31271 388 aaPredicted RBP17.38■□□□□ 0.37
PTCH1-201ENST00000331920 PEX3P56589 373 aa17.38■□□□□ 0.37
PTCH1-201ENST00000331920 HPCAP84074 193 aa17.38■□□□□ 0.37
PTCH1-201ENST00000331920 GTF2H3Q13889 308 aa17.38■□□□□ 0.37
PTCH1-201ENST00000331920 ARHGEF25Q86VW2 580 aa17.38■□□□□ 0.37
PTCH1-201ENST00000331920 IL1RL2Q9HB29 575 aa17.38■□□□□ 0.37
PTCH1-201ENST00000331920 ATP5HO75947 161 aa17.38■□□□□ 0.37
PTCH1-201ENST00000331920 HAUS5O94927 633 aa17.38■□□□□ 0.37
PTCH1-201ENST00000331920 PNMA6EA0A0J9YXQ4 647 aa17.38■□□□□ 0.37
PTCH1-201ENST00000331920 E2F8A0AVK6 867 aa17.38■□□□□ 0.37
PTCH1-201ENST00000331920 CASP8Q14790 479 aa17.38■□□□□ 0.37
PTCH1-201ENST00000331920 DSCC1Q9BVC3 393 aa17.38■□□□□ 0.37
PTCH1-201ENST00000331920 AMNQ9BXJ7 453 aa17.38■□□□□ 0.37
PTCH1-201ENST00000331920 MAN1C1Q9NR34 630 aa17.38■□□□□ 0.37
PTCH1-201ENST00000331920 ABCC1P33527 1531 aa17.38■□□□□ 0.37
PTCH1-201ENST00000331920 PSAPP07602 524 aa17.38■□□□□ 0.37
PTCH1-201ENST00000331920 SGO1Q5FBB7 561 aa17.38■□□□□ 0.37
PTCH1-201ENST00000331920 GALNT17Q6IS24 598 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 TBC1D19Q8N5T2 526 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 PNMA8BQ9ULN7 279 aaPredicted RBP17.37■□□□□ 0.37
PTCH1-201ENST00000331920 ZNF197O14709 1029 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 TTLL1O95922 423 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 SERPINB1P30740 379 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 SNX31Q8N9S9 440 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 IGF1RP08069 1367 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 MYO1CO00159 1063 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 PALMO75781 387 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 CMA1P23946 247 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 AKT1P31749 480 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 CATSPER4Q7RTX7 472 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 UNC45BQ8IWX7 931 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 TADA1Q96BN2 335 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 USP44Q9H0E7 712 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 CDC25AP30304 524 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 ZNF699Q32M78 642 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 TBC1D9BQ66K14 1250 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 TBCKQ8TEA7 893 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 COA7Q96BR5 231 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 MLNP12872 115 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 INPP5AQ14642 412 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 HEATR6Q6AI08 1181 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms