RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 ITIH3Q06033 890 aa9.41□□□□□ -0.9
MSL3-201ENST00000312196 STK3Q13188 491 aa9.41□□□□□ -0.9
MSL3-201ENST00000312196 SMC1AQ14683 1233 aaKnown RBP9.41□□□□□ -0.9
MSL3-201ENST00000312196 SAFBQ15424 915 aaKnown RBP eCLIP9.41□□□□□ -0.9
MSL3-201ENST00000312196 MTERF2Q49AM1 385 aa9.41□□□□□ -0.9
MSL3-201ENST00000312196 ANKRD54Q6NXT1 300 aa9.41□□□□□ -0.9
MSL3-201ENST00000312196 KCNT2Q6UVM3 1135 aa9.41□□□□□ -0.9
MSL3-201ENST00000312196 PIK3AP1Q6ZUJ8 805 aa9.41□□□□□ -0.9
MSL3-201ENST00000312196 DDX53Q86TM3 631 aaKnown RBP9.41□□□□□ -0.9
MSL3-201ENST00000312196 HDAC7Q8WUI4 952 aa9.41□□□□□ -0.9
MSL3-201ENST00000312196 NLRP7Q8WX94 980 aa9.41□□□□□ -0.9
MSL3-201ENST00000312196 KCNN1Q92952 543 aa9.41□□□□□ -0.9
MSL3-201ENST00000312196 TLE6Q9H808 572 aa9.41□□□□□ -0.9
MSL3-201ENST00000312196 TYW1Q9NV66 732 aaKnown RBP9.41□□□□□ -0.9
MSL3-201ENST00000312196 SSX2IPQ9Y2D8 614 aa9.41□□□□□ -0.9
MSL3-201ENST00000312196 LAD1O00515 517 aa9.4□□□□□ -0.9
MSL3-201ENST00000312196 SLITRK3O94933 977 aa9.4□□□□□ -0.9
MSL3-201ENST00000312196 EFEMP2O95967 443 aa9.4□□□□□ -0.9
MSL3-201ENST00000312196 YWHABP31946 246 aaKnown RBP9.4□□□□□ -0.9
MSL3-201ENST00000312196 MTHFRP42898 656 aa9.4□□□□□ -0.9
MSL3-201ENST00000312196 PTENP60484 403 aa9.4□□□□□ -0.9
MSL3-201ENST00000312196 CALCRLQ16602 461 aa9.4□□□□□ -0.9
MSL3-201ENST00000312196 PTPN21Q16825 1174 aa9.4□□□□□ -0.9
MSL3-201ENST00000312196 TMEM266Q2M3C6 531 aa9.4□□□□□ -0.9
MSL3-201ENST00000312196 CLLU1OSQ5K130 101 aa9.4□□□□□ -0.9
MSL3-201ENST00000312196 LRRC55Q6ZSA7 311 aa9.4□□□□□ -0.9
MSL3-201ENST00000312196 FERMT3Q86UX7 667 aa9.4□□□□□ -0.9
MSL3-201ENST00000312196 ALYREFQ86V81 257 aaKnown RBP9.4□□□□□ -0.9
MSL3-201ENST00000312196 SUGP1Q8IWZ8 645 aaKnown RBP9.4□□□□□ -0.9
MSL3-201ENST00000312196 OXER1Q8TDS5 423 aa9.4□□□□□ -0.9
MSL3-201ENST00000312196 IFT122Q9HBG6 1241 aa9.4□□□□□ -0.9
MSL3-201ENST00000312196 USP15Q9Y4E8 981 aaPredicted RBP9.4□□□□□ -0.9
MSL3-201ENST00000312196 CHMP2AO43633 222 aa9.4□□□□□ -0.9
MSL3-201ENST00000312196 EMC2Q15006 297 aa9.4□□□□□ -0.9
MSL3-201ENST00000312196 FAM102BQ5T8I3 360 aa9.4□□□□□ -0.9
MSL3-201ENST00000312196 PPFIBP1Q86W92 1011 aa9.4□□□□□ -0.9
MSL3-201ENST00000312196 ABI1Q8IZP0 508 aa9.4□□□□□ -0.9
MSL3-201ENST00000312196 LRRC71Q8N4P6 559 aa9.4□□□□□ -0.9
MSL3-201ENST00000312196 CEP170P1Q96L14 293 aa9.4□□□□□ -0.9
MSL3-201ENST00000312196 MTRQ99707 1265 aa9.4□□□□□ -0.9
MSL3-201ENST00000312196 EIF2AK1Q9BQI3 630 aaKnown RBP9.4□□□□□ -0.9
MSL3-201ENST00000312196 LXNQ9BS40 222 aa9.4□□□□□ -0.9
MSL3-201ENST00000312196 PCDHA12Q9UN75 941 aa9.4□□□□□ -0.9
MSL3-201ENST00000312196 USTQ9Y2C2 406 aa9.4□□□□□ -0.9
MSL3-201ENST00000312196 A0A087WZ62 844 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 NEMFO60524 1076 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 OFD1O75665 1012 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 GLP2RO95838 553 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 NEK4P51957 841 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 DLX2Q07687 328 aaPredicted RBP9.39□□□□□ -0.91
MSL3-201ENST00000312196 LAMTOR4Q0VGL1 99 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 PDIA5Q14554 519 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 NOMO2Q5JPE7 1267 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 UBXN11Q5T124 520 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 GLB1LQ6UWU2 654 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 HFE2Q6ZVN8 426 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 DIS3L2Q8IYB7 885 aaKnown RBP9.39□□□□□ -0.91
MSL3-201ENST00000312196 HACE1Q8IYU2 909 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 PLCD3Q8N3E9 789 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 MCPH1Q8NEM0 835 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 ERMNQ8TAM6 284 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 URGCPQ8TCY9 931 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 DYDC2Q96IM9 177 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 PRIMPOLQ96LW4 560 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 FDXACB1Q9BRP7 624 aaPredicted RBP9.39□□□□□ -0.91
MSL3-201ENST00000312196 FAM105AQ9NUU6 356 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 KIF3AQ9Y496 699 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.39□□□□□ -0.91
MSL3-201ENST00000312196 CHD9Q3L8U1 2897 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 SCP2P22307 547 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 PRPHP41219 470 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 MCM2P49736 904 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 GATMP50440 423 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 FXR2P51116 673 aaKnown RBP eCLIP9.39□□□□□ -0.91
MSL3-201ENST00000312196 NCBP1Q09161 790 aaKnown RBP9.39□□□□□ -0.91
MSL3-201ENST00000312196 ST3GAL1Q11201 340 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 CDCA2Q69YH5 1023 aaPredicted RBP9.39□□□□□ -0.91
MSL3-201ENST00000312196 POTEDQ86YR6 584 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 THNSL1Q8IYQ7 743 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 MRPL43Q8N983 215 aaKnown RBP9.39□□□□□ -0.91
MSL3-201ENST00000312196 CMASQ8NFW8 434 aaPredicted RBP9.39□□□□□ -0.91
MSL3-201ENST00000312196 PRPF31Q8WWY3 499 aaKnown RBP9.39□□□□□ -0.91
MSL3-201ENST00000312196 ASIC4Q96FT7 647 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 NACC1Q96RE7 527 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 HERC2P3Q9BVR0 1158 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 TIPINQ9BVW5 301 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 C2orf40Q9H1Z8 148 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 KCNG1Q9UIX4 513 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 GIT1Q9Y2X7 761 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 COL6A3P12111 3177 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 KMT2EQ8IZD2 1858 aa9.39□□□□□ -0.91
MSL3-201ENST00000312196 DNAH12Q6ZR08 3092 aa9.38□□□□□ -0.91
MSL3-201ENST00000312196 MARCH6O60337 910 aa9.38□□□□□ -0.91
MSL3-201ENST00000312196 CTSAP10619 480 aa9.38□□□□□ -0.91
MSL3-201ENST00000312196 U2AF2P26368 475 aaKnown RBP eCLIP9.38□□□□□ -0.91
MSL3-201ENST00000312196 RABEP1Q15276 862 aa9.38□□□□□ -0.91
MSL3-201ENST00000312196 EARS2Q5JPH6 523 aaKnown RBP9.38□□□□□ -0.91
MSL3-201ENST00000312196 CATSPER4Q7RTX7 472 aa9.38□□□□□ -0.91
MSL3-201ENST00000312196 PRSS33Q8NF86 280 aa9.38□□□□□ -0.91
MSL3-201ENST00000312196 FBXO18Q8NFZ0 1043 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms