RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 TTC27Q6P3X3 843 aa18.44■□□□□ 0.54
SPG7-201ENST00000268704 RBM17Q96I25 401 aaKnown RBP18.44■□□□□ 0.54
SPG7-201ENST00000268704 ZNF317Q96PQ6 595 aaPredicted RBP18.44■□□□□ 0.54
SPG7-201ENST00000268704 ALG6Q9Y672 507 aa18.44■□□□□ 0.54
SPG7-201ENST00000268704 GOLGA6L10A0A0M3HER8 536 aa18.43■□□□□ 0.54
SPG7-201ENST00000268704 TCRBV7S2A1N4TA0A589 114 aa18.43■□□□□ 0.54
SPG7-201ENST00000268704 EYA4O95677 639 aa18.43■□□□□ 0.54
SPG7-201ENST00000268704 MAPK7Q13164 816 aa18.43■□□□□ 0.54
SPG7-201ENST00000268704 SIAH1Q8IUQ4 282 aa18.43■□□□□ 0.54
SPG7-201ENST00000268704 ATXN2LQ8WWM7 1075 aaKnown RBP18.43■□□□□ 0.54
SPG7-201ENST00000268704 SGSM3Q96HU1 749 aa18.43■□□□□ 0.54
SPG7-201ENST00000268704 DYDC2Q96IM9 177 aa18.43■□□□□ 0.54
SPG7-201ENST00000268704 PRMT1Q99873 361 aaKnown RBP18.43■□□□□ 0.54
SPG7-201ENST00000268704 CCDC113Q9H0I3 377 aa18.43■□□□□ 0.54
SPG7-201ENST00000268704 GRHL1Q9NZI5 618 aa18.43■□□□□ 0.54
SPG7-201ENST00000268704 PTPN22Q9Y2R2 807 aa18.43■□□□□ 0.54
SPG7-201ENST00000268704 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.43■□□□□ 0.54
SPG7-201ENST00000268704 ANKRD63C9JTQ0 380 aa18.43■□□□□ 0.54
SPG7-201ENST00000268704 SERPINB2P05120 415 aa18.43■□□□□ 0.54
SPG7-201ENST00000268704 SREBF1P36956 1147 aa18.43■□□□□ 0.54
SPG7-201ENST00000268704 NBPF9Q3BBW0 867 aa18.43■□□□□ 0.54
SPG7-201ENST00000268704 HOOK3Q86VS8 718 aa18.43■□□□□ 0.54
SPG7-201ENST00000268704 LRRC34Q8IZ02 419 aa18.43■□□□□ 0.54
SPG7-201ENST00000268704 AMNQ9BXJ7 453 aa18.43■□□□□ 0.54
SPG7-201ENST00000268704 OLFML3Q9NRN5 406 aa18.43■□□□□ 0.54
SPG7-201ENST00000268704 GGT7Q9UJ14 662 aa18.43■□□□□ 0.54
SPG7-201ENST00000268704 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.43■□□□□ 0.54
SPG7-201ENST00000268704 CEP83Q9Y592 693 aa18.43■□□□□ 0.54
SPG7-201ENST00000268704 TISP43B9A030 160 aa18.43■□□□□ 0.54
SPG7-201ENST00000268704 APOBEC3HQ6NTF7 200 aaKnown RBP18.43■□□□□ 0.54
SPG7-201ENST00000268704 MOXD1Q6UVY6 613 aa18.43■□□□□ 0.54
SPG7-201ENST00000268704 HOOK2Q96ED9 719 aa18.43■□□□□ 0.54
SPG7-201ENST00000268704 ACP6Q9NPH0 428 aa18.43■□□□□ 0.54
SPG7-201ENST00000268704 APEX2Q9UBZ4 518 aa18.43■□□□□ 0.54
SPG7-201ENST00000268704 DDTLA6NHG4 134 aaPredicted RBP18.42■□□□□ 0.54
SPG7-201ENST00000268704 EIF3BP55884 814 aaKnown RBP18.42■□□□□ 0.54
SPG7-201ENST00000268704 DLG4P78352 724 aa18.42■□□□□ 0.54
SPG7-201ENST00000268704 MYL7Q01449 175 aa18.42■□□□□ 0.54
SPG7-201ENST00000268704 FBXO11Q86XK2 927 aa18.42■□□□□ 0.54
SPG7-201ENST00000268704 SPICE1Q8N0Z3 855 aa18.42■□□□□ 0.54
SPG7-201ENST00000268704 PRELID2Q8N945 189 aa18.42■□□□□ 0.54
SPG7-201ENST00000268704 QTRT2Q9H974 415 aaKnown RBP18.42■□□□□ 0.54
SPG7-201ENST00000268704 CNOT10Q9H9A5 744 aaKnown RBP18.42■□□□□ 0.54
SPG7-201ENST00000268704 A1CFQ9NQ94 594 aaKnown RBP18.42■□□□□ 0.54
SPG7-201ENST00000268704 CTTNBP2NLQ9P2B4 639 aa18.42■□□□□ 0.54
SPG7-201ENST00000268704 WRAP73Q9P2S5 460 aaPredicted RBP18.42■□□□□ 0.54
SPG7-201ENST00000268704 FRMPD4Q14CM0 1322 aa18.42■□□□□ 0.54
SPG7-201ENST00000268704 TAF1LQ8IZX4 1826 aa18.42■□□□□ 0.54
SPG7-201ENST00000268704 PPP1R12BO60237 982 aaPredicted RBP18.42■□□□□ 0.54
SPG7-201ENST00000268704 TRIM37O94972 964 aa18.42■□□□□ 0.54
SPG7-201ENST00000268704 BTBD6Q96KE9 485 aa18.42■□□□□ 0.54
SPG7-201ENST00000268704 GLT8D2Q9H1C3 349 aa18.42■□□□□ 0.54
SPG7-201ENST00000268704 RGS17Q9UGC6 210 aaPredicted RBP18.42■□□□□ 0.54
SPG7-201ENST00000268704 ATP8B3O60423 1300 aa18.42■□□□□ 0.54
SPG7-201ENST00000268704 TBX3O15119 743 aa18.41■□□□□ 0.54
SPG7-201ENST00000268704 RGS16O15492 202 aaPredicted RBP18.41■□□□□ 0.54
SPG7-201ENST00000268704 NUDT17P0C025 328 aa18.41■□□□□ 0.54
SPG7-201ENST00000268704 PTGIRP43119 386 aa18.41■□□□□ 0.54
SPG7-201ENST00000268704 C1orf186Q6ZWK4 172 aa18.41■□□□□ 0.54
SPG7-201ENST00000268704 MAEAQ7L5Y9 396 aa18.41■□□□□ 0.54
SPG7-201ENST00000268704 CCDC197Q8NCU1 140 aa18.41■□□□□ 0.54
SPG7-201ENST00000268704 FIZ1Q96SL8 496 aa18.41■□□□□ 0.54
SPG7-201ENST00000268704 ELAC2Q9BQ52 826 aaKnown RBP18.41■□□□□ 0.54
SPG7-201ENST00000268704 WDR18Q9BV38 432 aa18.41■□□□□ 0.54
SPG7-201ENST00000268704 KCNQ5Q9NR82 932 aa18.41■□□□□ 0.54
SPG7-201ENST00000268704 AGPAT3Q9NRZ7 376 aa18.41■□□□□ 0.54
SPG7-201ENST00000268704 DBR1Q9UK59 544 aaKnown RBP18.41■□□□□ 0.54
SPG7-201ENST00000268704 F5H6K3 240 aa18.41■□□□□ 0.54
SPG7-201ENST00000268704 SLITRK3O94933 977 aa18.41■□□□□ 0.54
SPG7-201ENST00000268704 MMP13P45452 471 aa18.41■□□□□ 0.54
SPG7-201ENST00000268704 KCNJ1P48048 391 aa18.41■□□□□ 0.54
SPG7-201ENST00000268704 CERKLQ49MI3 558 aaPredicted RBP18.41■□□□□ 0.54
SPG7-201ENST00000268704 PREPLQ4J6C6 727 aaPredicted RBP18.41■□□□□ 0.54
SPG7-201ENST00000268704 LACTB2Q53H82 288 aaPredicted RBP18.41■□□□□ 0.54
SPG7-201ENST00000268704 CCDC25Q86WR0 208 aa18.41■□□□□ 0.54
SPG7-201ENST00000268704 FAM20AQ96MK3 541 aa18.41■□□□□ 0.54
SPG7-201ENST00000268704 PARVGQ9HBI0 331 aa18.41■□□□□ 0.54
SPG7-201ENST00000268704 FOXO6A8MYZ6 492 aa18.41■□□□□ 0.54
SPG7-201ENST00000268704 FTLP02792 175 aaPredicted RBP18.41■□□□□ 0.54
SPG7-201ENST00000268704 MESDQ14696 234 aa18.41■□□□□ 0.54
SPG7-201ENST00000268704 FAM133BQ5BKY9 247 aaKnown RBP18.41■□□□□ 0.54
SPG7-201ENST00000268704 PCIF1Q9H4Z3 704 aa18.41■□□□□ 0.54
SPG7-201ENST00000268704 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.41■□□□□ 0.542e-12■■■■■ 36.9
SPG7-201ENST00000268704 KCNG1Q9UIX4 513 aa18.41■□□□□ 0.54
SPG7-201ENST00000268704 ANKRD62A6NC57 917 aa18.4■□□□□ 0.54
SPG7-201ENST00000268704 CCT8L1PA6NM43 557 aa18.4■□□□□ 0.54
SPG7-201ENST00000268704 SLC26A4O43511 780 aa18.4■□□□□ 0.54
SPG7-201ENST00000268704 MMP14P50281 582 aa18.4■□□□□ 0.54
SPG7-201ENST00000268704 ICA1Q05084 483 aa18.4■□□□□ 0.54
SPG7-201ENST00000268704 PPP1R7Q15435 360 aa18.4■□□□□ 0.54
SPG7-201ENST00000268704 HIBCHQ6NVY1 386 aaPredicted RBP18.4■□□□□ 0.54
SPG7-201ENST00000268704 OTUD6AQ7L8S5 288 aa18.4■□□□□ 0.54
SPG7-201ENST00000268704 ARMC9Q7Z3E5 817 aa18.4■□□□□ 0.54
SPG7-201ENST00000268704 ARHGEF19Q8IW93 802 aa18.4■□□□□ 0.54
SPG7-201ENST00000268704 FAM178BQ8IXR5 827 aa18.4■□□□□ 0.54
SPG7-201ENST00000268704 KAT5Q92993 513 aa18.4■□□□□ 0.54
SPG7-201ENST00000268704 POP1Q99575 1024 aaKnown RBP18.4■□□□□ 0.54
SPG7-201ENST00000268704 LRRC4BQ9NT99 713 aa18.4■□□□□ 0.54
SPG7-201ENST00000268704 FRMD4BQ9Y2L6 1034 aa18.4■□□□□ 0.54
SPG7-201ENST00000268704 CD2APQ9Y5K6 639 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms