RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 PLAGL2Q9UPG8 496 aa4.95□□□□□ -1.62
VPS13C-201ENST00000249837 ALG6Q9Y672 507 aa4.95□□□□□ -1.62
VPS13C-201ENST00000249837 MYH9P35579 1960 aaKnown RBP4.95□□□□□ -1.62
VPS13C-201ENST00000249837 ALDH1B1P30837 517 aa4.95□□□□□ -1.62
VPS13C-201ENST00000249837 PHBP35232 272 aa4.95□□□□□ -1.62
VPS13C-201ENST00000249837 PSMC6P62333 389 aa4.95□□□□□ -1.62
VPS13C-201ENST00000249837 BRDTQ58F21 947 aaPredicted RBP4.95□□□□□ -1.62
VPS13C-201ENST00000249837 IZUMO3Q5VZ72 239 aa4.95□□□□□ -1.62
VPS13C-201ENST00000249837 C16orf86Q6ZW13 317 aa4.95□□□□□ -1.62
VPS13C-201ENST00000249837 ARHGAP24Q8N264 748 aa4.95□□□□□ -1.62
VPS13C-201ENST00000249837 BTBD6Q96KE9 485 aa4.95□□□□□ -1.62
VPS13C-201ENST00000249837 FAM20AQ96MK3 541 aa4.95□□□□□ -1.62
VPS13C-201ENST00000249837 ISCUQ9H1K1 167 aa4.95□□□□□ -1.62
VPS13C-201ENST00000249837 STAMBPO95630 424 aa4.95□□□□□ -1.62
VPS13C-201ENST00000249837 CRKP46108 304 aa4.95□□□□□ -1.62
VPS13C-201ENST00000249837 LMBRD2Q68DH5 695 aaPredicted RBP4.95□□□□□ -1.62
VPS13C-201ENST00000249837 PDCD7Q8N8D1 485 aaKnown RBP4.95□□□□□ -1.62
VPS13C-201ENST00000249837 RFFLQ8WZ73 363 aa4.95□□□□□ -1.62
VPS13C-201ENST00000249837 ZNF341Q9BYN7 854 aa4.95□□□□□ -1.62
VPS13C-201ENST00000249837 PCSK1NQ9UHG2 260 aa4.95□□□□□ -1.62
VPS13C-201ENST00000249837 CYP26A1O43174 497 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 COMTP21964 271 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 RASA3Q14644 834 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 LRIG3Q6UXM1 1119 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 MCF2L2Q86YR7 1114 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 ADAM33Q9BZ11 813 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 SLC40A1Q9NP59 571 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 JCADQ9P266 1359 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 CAND2O75155 1236 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 MED24O75448 989 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 SAT1P21673 171 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 HMGB2P26583 209 aaKnown RBP4.94□□□□□ -1.62
VPS13C-201ENST00000249837 BPIFB4P59827 614 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 SLC30A10Q6XR72 485 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 ZNF507Q8TCN5 953 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 SUCLA2Q9P2R7 463 aaPredicted RBP4.94□□□□□ -1.62
VPS13C-201ENST00000249837 TACC3Q9Y6A5 838 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 MAPK13O15264 365 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 CLDN3O15551 220 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 OSTNP61366 133 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 SEMA3FQ13275 785 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 AGBL2Q5U5Z8 902 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 CCDC137Q6PK04 289 aaKnown RBP4.94□□□□□ -1.62
VPS13C-201ENST00000249837 TMEM179Q6ZVK1 233 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.94□□□□□ -1.62
VPS13C-201ENST00000249837 HIPK4Q8NE63 616 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 SLC35G2Q8TBE7 412 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 RAB3IL1Q8TBN0 382 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 VTI1AQ96AJ9 217 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 CEP170P1Q96L14 293 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 TMEM206Q9H813 350 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 HOXA7P31268 230 aaPredicted RBP4.94□□□□□ -1.62
VPS13C-201ENST00000249837 AENQ8WTP8 325 aaKnown RBP4.94□□□□□ -1.62
VPS13C-201ENST00000249837 EPHB6O15197 1021 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 FOXP2O15409 715 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 PPP1R18Q6NYC8 613 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 SDCCAG8Q86SQ7 713 aaPredicted RBP4.94□□□□□ -1.62
VPS13C-201ENST00000249837 ANKS1AQ92625 1134 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 MTRQ99707 1265 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 LXNQ9BS40 222 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 SEPT10Q9P0V9 454 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 DCTN4Q9UJW0 460 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 MYBL2P10244 700 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 ERVK-9P63128 1117 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 KYNUQ16719 465 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 MTERF2Q49AM1 385 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 RCSD1Q6JBY9 416 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 CYFIP1Q7L576 1253 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 KCNK18Q7Z418 384 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 CREG2Q8IUH2 290 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 MAML1Q92585 1016 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 TTC17Q96AE7 1141 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 PRMT1Q99873 361 aaKnown RBP4.94□□□□□ -1.62
VPS13C-201ENST00000249837 GPR75-ASB3A0A0A6YYF3 556 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 NOP56O00567 594 aaKnown RBP4.94□□□□□ -1.62
VPS13C-201ENST00000249837 CYP11B2P19099 503 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 MAN1A1P33908 653 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 MSH2P43246 934 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 JAMLQ86YT9 394 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 SLC4A9Q96Q91 983 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 A0A0G2JND7 137 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 CYTH3O43739 400 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 KLRC4O43908 158 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 POLR2BP30876 1174 aaKnown RBP4.94□□□□□ -1.62
VPS13C-201ENST00000249837 SCTRP47872 440 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 STAT2P52630 851 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 IRX4P78413 519 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 CDK17Q00537 523 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 LRP10Q7Z4F1 713 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 SUPT20HQ8NEM7 779 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 ELMO3Q96BJ8 720 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 FAM213AQ9BRX8 229 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 ALG13Q9NP73 1137 aaKnown RBP4.94□□□□□ -1.62
VPS13C-201ENST00000249837 STK32BQ9NY57 414 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 NOP53Q9NZM5 478 aaKnown RBP4.94□□□□□ -1.62
VPS13C-201ENST00000249837 MIF4GDA9UHW6 222 aaKnown RBP4.94□□□□□ -1.62
VPS13C-201ENST00000249837 PDXKO00764 312 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 PRELPP51888 382 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 SLC20A1Q8WUM9 679 aa4.94□□□□□ -1.62
VPS13C-201ENST00000249837 SYN2Q92777 582 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms