RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Myh11O08638 1972 aa18.16■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Zfp984A2A7A2 547 aa18.16■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Tatdn3Q3U1C6 294 aa18.16■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Fam8a1Q3URQ4 399 aa18.16■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Zpbp2Q6X786 326 aa18.16■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Q922C1 641 aa18.16■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Dqx1Q924H9 718 aa18.16■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Nlrp5Q9R1M5 1163 aa18.16■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Gimap9G3X987 291 aa18.16■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Mettl14Q3UIK4 456 aa18.16■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Nlrp4eQ66X19 978 aa18.16■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Dhx37Q6NZL1 1150 aa18.16■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Angel1Q8VCU0 667 aa18.16■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Fam111aQ9D2L9 613 aa18.16■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Rab11fip1Q9D620 645 aa18.16■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Golgb1E9PVZ8 3238 aa18.16■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Robo3Q9Z2I4 1366 aa18.16■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Bpifb9bA2AJD1 591 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Ccdc6D3YZP9 469 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Serpinb6eI7HJI3 429 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 PorP37040 678 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Il15P48346 162 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 EgfrQ01279 1210 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Ifit1bl2Q3U687 466 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Lrrc36Q3V0M2 755 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Ccdc92bQ5SUE3 299 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Ssxb10Q6XAR7 170 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Klhl29Q80T74 875 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Bpifb9aQ80XI7 591 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Phf20Q8BLG0 1010 aaKnown RBP18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Zbtb44Q8R0A2 453 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Frmpd3A0A140LIW3 1774 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 DtnbO70585 659 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Ccng1P51945 294 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Ikzf1Q03267 517 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Nlrp2Q4PLS0 1046 aaKnown RBP18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Kctd19Q562E2 927 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Rsad1Q5SUV1 442 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 OgdhQ60597 1023 aaKnown RBP18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Bcas3Q8CCN5 928 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Slc12a8Q8VI23 705 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Josd2Q9CR30 188 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Gfpt2Q9Z2Z9 682 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Glt1d1A4FUP9 346 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Morc3F7BJB9 942 aaKnown RBP18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 EnahQ03173 802 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Cntn3Q07409 1028 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Fbln1Q08879 705 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Lrrc14Q8VC16 493 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 F11Q91Y47 624 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Rnf225Q9D7D1 332 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Znf654Q9DAU9 571 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Cpne8Q9DC53 577 aa18.15■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Spata31d1aE9QA35 1336 aa18.14■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Cpsf2O35218 782 aaKnown RBP18.14■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Sstr3P30935 428 aa18.14■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Tab3Q571K4 716 aa18.14■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Islr2Q5RKR3 745 aa18.14■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Herc4Q6PAV2 1057 aa18.14■□□□□ 0.5
Ctcf-201ENSMUST00000005841 PolrmtQ8BKF1 1207 aaKnown RBP18.14■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Tbc1d23Q8K0F1 684 aa18.14■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Med15Q924H2 789 aa18.14■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Itgb4A2A863 1818 aa18.14■□□□□ 0.49
Ctcf-201ENSMUST00000005841 6030498E09RikB1AX85 169 aa18.14■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Maml3D4QGC2 1135 aa18.14■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Irf6P97431 467 aa18.14■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Rcn1Q05186 325 aa18.14■□□□□ 0.49
Ctcf-201ENSMUST00000005841 KhsrpQ3U0V1 748 aaKnown RBP18.14■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Tmem179Q8BHH9 233 aa18.14■□□□□ 0.49
Ctcf-201ENSMUST00000005841 SucoQ8C341 1250 aa18.14■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Mill1Q8HWE7 395 aa18.14■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Zcchc8Q9CYA6 709 aaKnown RBP18.14■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Sem1P60897 70 aa18.14■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Eya3P97480 510 aa18.14■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Rnf113a2Q14B01 337 aa18.14■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Retreg2Q6NS82 541 aa18.14■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Krt36B1AQ75 473 aa18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Map2k1P31938 393 aa18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Mybl1P51960 751 aa18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 ZufspQ3T9Z9 577 aa18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 NostrinQ6WKZ7 506 aa18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Havcr2Q8VIM0 281 aa18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Ttll1Q91V51 423 aa18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Rtn3Q9ES97 964 aa18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Tfr2Q9JKX3 798 aa18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Homer1Q9Z2Y3 366 aa18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Ace3D0G895 737 aa18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Gm8298J3QPI0 401 aa18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Magea5O89009 320 aa18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Magea8O89012 320 aa18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Slc2a13Q3UHK1 637 aa18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Klra6Q60653 266 aa18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Grb10Q60760 621 aa18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Cuedc2Q9CXX9 284 aa18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Sf3a3Q9D554 501 aaKnown RBP18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 DmgdhQ9DBT9 869 aa18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Trmt112Q9DCG9 125 aa18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Htra2Q9JIY5 458 aa18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Hyou1Q9JKR6 999 aaKnown RBP18.13■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Aknad1E9Q8N6 675 aa18.13■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 66 ms