RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 FAM126BQ8IXS8 530 aa11.32□□□□□ -0.6
PHGDH-224ENST00000641711 GUF1Q8N442 669 aaKnown RBP11.32□□□□□ -0.6
PHGDH-224ENST00000641711 C7orf31Q8N865 590 aa11.32□□□□□ -0.6
PHGDH-224ENST00000641711 BBXQ8WY36 941 aaPredicted RBP11.32□□□□□ -0.6
PHGDH-224ENST00000641711 PCYT2Q99447 389 aa11.32□□□□□ -0.6
PHGDH-224ENST00000641711 DUSP9Q99956 384 aaKnown RBP11.32□□□□□ -0.6
PHGDH-224ENST00000641711 TUFT1Q9NNX1 390 aa11.32□□□□□ -0.6
PHGDH-224ENST00000641711 TRMT1Q9NXH9 659 aaKnown RBP11.32□□□□□ -0.6
PHGDH-224ENST00000641711 NR2E3Q9Y5X4 410 aa11.32□□□□□ -0.6
PHGDH-224ENST00000641711 RIOK3O14730 519 aaKnown RBP11.31□□□□□ -0.6
PHGDH-224ENST00000641711 ZSCAN12O43309 604 aa11.31□□□□□ -0.6
PHGDH-224ENST00000641711 CTIFO43310 598 aaKnown RBP11.31□□□□□ -0.6
PHGDH-224ENST00000641711 CHMP2AO43633 222 aa11.31□□□□□ -0.6
PHGDH-224ENST00000641711 SORBS3O60504 671 aa11.31□□□□□ -0.6
PHGDH-224ENST00000641711 MFAP3LO75121 409 aa11.31□□□□□ -0.6
PHGDH-224ENST00000641711 CD4P01730 458 aa11.31□□□□□ -0.6
PHGDH-224ENST00000641711 QARSP47897 775 aaKnown RBP11.31□□□□□ -0.6
PHGDH-224ENST00000641711 ECM1Q16610 540 aa11.31□□□□□ -0.6
PHGDH-224ENST00000641711 LRRC26Q2I0M4 334 aa11.31□□□□□ -0.6
PHGDH-224ENST00000641711 XKR3Q5GH77 459 aa11.31□□□□□ -0.6
PHGDH-224ENST00000641711 ZNF484Q5JVG2 852 aa11.31□□□□□ -0.6
PHGDH-224ENST00000641711 KCNK18Q7Z418 384 aa11.31□□□□□ -0.6
PHGDH-224ENST00000641711 TRIM50Q86XT4 487 aa11.31□□□□□ -0.6
PHGDH-224ENST00000641711 CNGA4Q8IV77 575 aa11.31□□□□□ -0.6
PHGDH-224ENST00000641711 FAM114A1Q8IWE2 563 aa11.31□□□□□ -0.6
PHGDH-224ENST00000641711 C4orf19Q8IY42 314 aa11.31□□□□□ -0.6
PHGDH-224ENST00000641711 EXOC8Q8IYI6 725 aa11.31□□□□□ -0.6
PHGDH-224ENST00000641711 ZNF710Q8N1W2 664 aa11.31□□□□□ -0.6
PHGDH-224ENST00000641711 CCDC155Q8N6L0 562 aa11.31□□□□□ -0.6
PHGDH-224ENST00000641711 KIAA0895Q8NCT3 520 aa11.31□□□□□ -0.6
PHGDH-224ENST00000641711 KIF18AQ8NI77 898 aa11.31□□□□□ -0.6
PHGDH-224ENST00000641711 ZNF507Q8TCN5 953 aa11.31□□□□□ -0.6
PHGDH-224ENST00000641711 POLR3CQ9BUI4 534 aaPredicted RBP11.31□□□□□ -0.6
PHGDH-224ENST00000641711 ZSWIM4Q9H7M6 989 aa11.31□□□□□ -0.6
PHGDH-224ENST00000641711 TAB2Q9NYJ8 693 aa11.31□□□□□ -0.6
PHGDH-224ENST00000641711 GABBR1Q9UBS5 961 aa11.31□□□□□ -0.6
PHGDH-224ENST00000641711 MAPK8IP1Q9UQF2 711 aa11.31□□□□□ -0.6
PHGDH-224ENST00000641711 EVPLQ92817 2033 aa11.31□□□□□ -0.6
PHGDH-224ENST00000641711 GRIN2DO15399 1336 aa11.31□□□□□ -0.6
PHGDH-224ENST00000641711 LTBP2Q14767 1821 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 POTEB3A0JP26 581 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 C17orf102A2RUQ5 167 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 MBLAC1A4D2B0 266 aaPredicted RBP11.3□□□□□ -0.6
PHGDH-224ENST00000641711 TRIM49BA6NDI0 452 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 EML1O00423 815 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 PITPNM1O00562 1244 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 PARNO95453 639 aaKnown RBP11.3□□□□□ -0.6
PHGDH-224ENST00000641711 OATP04181 439 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 GYPCP04921 128 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 TPM1P09493 284 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 CLTBP09497 229 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 SMIM10L2AP0DMW4 78 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 SMIM10L2BP0DMW5 78 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 RPA1P27694 616 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 CCT6AP40227 531 aaKnown RBP11.3□□□□□ -0.6
PHGDH-224ENST00000641711 ADKP55263 362 aaKnown RBP11.3□□□□□ -0.6
PHGDH-224ENST00000641711 PSMC6P62333 389 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 ADAM17P78536 824 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 PRKCEQ02156 737 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 MLLT1Q03111 559 aaPredicted RBP11.3□□□□□ -0.6
PHGDH-224ENST00000641711 GOLGA8FQ08AF8 430 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 GOLGA8DPQ0D2H9 430 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 PPFIA1Q13136 1202 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 PLCB4Q15147 1175 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 SYCP1Q15431 976 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 PTPN21Q16825 1174 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 TRIM60Q495X7 471 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 ANKRD40Q6AI12 368 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 NCAPH2Q6IBW4 605 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 SWSAP1Q6NVH7 229 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 TAF2Q6P1X5 1199 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 POTEBQ6S5H4 581 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 FAM43BQ6ZT52 329 aaPredicted RBP11.3□□□□□ -0.6
PHGDH-224ENST00000641711 RPAINQ86UA6 219 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 REXO1L1PQ8IX06 675 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 CSGALNACT2Q8N6G5 542 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 CAGE1Q8TC20 777 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 DDX12PQ92771 950 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 DNAJC19Q96DA6 116 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 HSD17B14Q9BPX1 270 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 EIF2AK1Q9BQI3 630 aaKnown RBP11.3□□□□□ -0.6
PHGDH-224ENST00000641711 JPH2Q9BR39 696 aaPredicted RBP11.3□□□□□ -0.6
PHGDH-224ENST00000641711 LXNQ9BS40 222 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 SRRTQ9BXP5 876 aaKnown RBP11.3□□□□□ -0.6
PHGDH-224ENST00000641711 NRBP2Q9NSY0 501 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 BMP2KQ9NSY1 1161 aaPredicted RBP11.3□□□□□ -0.6
PHGDH-224ENST00000641711 MAGEC2Q9UBF1 373 aaPredicted RBP11.3□□□□□ -0.6
PHGDH-224ENST00000641711 HDAC6Q9UBN7 1215 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 TRPC6Q9Y210 931 aa11.3□□□□□ -0.6
PHGDH-224ENST00000641711 KIAA0355O15063 1070 aa11.29□□□□□ -0.6
PHGDH-224ENST00000641711 MAGEB2O15479 319 aa11.29□□□□□ -0.6
PHGDH-224ENST00000641711 GAS2O43903 313 aaKnown RBP11.29□□□□□ -0.6
PHGDH-224ENST00000641711 ZNF862O60290 1169 aa11.29□□□□□ -0.6
PHGDH-224ENST00000641711 EVI5O60447 810 aa11.29□□□□□ -0.6
PHGDH-224ENST00000641711 FGFR1OPO95684 399 aaKnown RBP11.29□□□□□ -0.6
PHGDH-224ENST00000641711 PLA2G4BP0C869 781 aa11.29□□□□□ -0.6
PHGDH-224ENST00000641711 DNM2P50570 870 aa11.29□□□□□ -0.6
PHGDH-224ENST00000641711 ATN1P54259 1190 aaPredicted RBP11.29□□□□□ -0.6
PHGDH-224ENST00000641711 ETF1P62495 437 aaKnown RBP11.29□□□□□ -0.6
PHGDH-224ENST00000641711 TLE2Q04725 743 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms