RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 SETQ01105 290 aaPredicted RBP8.84□□□□□ -0.99
CLK1-215ENST00000621181 FOXK2Q01167 660 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 JAKMIP3Q5VZ66 844 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 CREB3L3Q68CJ9 461 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 ZNF746Q6NUN9 644 aaPredicted RBP8.84□□□□□ -0.99
CLK1-215ENST00000621181 EFCAB12Q6NXP0 572 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 TDRD5Q8NAT2 981 aaKnown RBP8.84□□□□□ -0.99
CLK1-215ENST00000621181 TMEM169Q96HH4 297 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 ZNF668Q96K58 619 aaPredicted RBP8.84□□□□□ -0.99
CLK1-215ENST00000621181 C22orf23Q9BZE7 217 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 LSG1Q9H089 658 aaKnown RBP8.84□□□□□ -0.99
CLK1-215ENST00000621181 ANO2Q9NQ90 1003 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 TBC1D22BQ9NU19 505 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 GABBR1Q9UBS5 961 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 DBR1Q9UK59 544 aaKnown RBP8.84□□□□□ -0.99
CLK1-215ENST00000621181 PCDHA10Q9Y5I2 948 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 MAFBQ9Y5Q3 323 aaPredicted RBP8.84□□□□□ -0.99
CLK1-215ENST00000621181 STK24Q9Y6E0 443 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 IGLV3-22A0A075B6J6 115 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.84□□□□□ -0.99
CLK1-215ENST00000621181 NT5C1B-RDH14C9J2C7 533 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 PROB1E7EW31 1015 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 ZBTB43O43298 467 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 ZC3H11AO75152 810 aaKnown RBP eCLIP8.84□□□□□ -0.991e-16■■■□□ 18.6
CLK1-215ENST00000621181 ASGR2P07307 311 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 DDIT3P35638 169 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 CLLU1OSQ5K130 101 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 ATAT1Q5SQI0 421 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 RARS2Q5T160 578 aaKnown RBP8.84□□□□□ -0.99
CLK1-215ENST00000621181 ASCL5Q7RTU5 278 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 VPS52Q8N1B4 723 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 SLC39A11Q8N1S5 342 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 ZNF710Q8N1W2 664 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 LRRC71Q8N4P6 559 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 TMEM105Q8N8V8 129 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 HELQQ8TDG4 1101 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 FAM167AQ96KS9 214 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 MRPL9Q9BYD2 267 aaKnown RBP8.84□□□□□ -0.99
CLK1-215ENST00000621181 SMOC2Q9H3U7 446 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 RNF19AQ9NV58 838 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 DACT1Q9NYF0 836 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 LIMD1Q9UGP4 676 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 NAP1L2Q9ULW6 460 aaPredicted RBP8.84□□□□□ -0.99
CLK1-215ENST00000621181 WDR87Q6ZQQ6 2873 aa8.84□□□□□ -0.99
CLK1-215ENST00000621181 PLXNA3P51805 1871 aa8.83□□□□□ -1
CLK1-215ENST00000621181 A0A0U1RQF3 1178 aa8.83□□□□□ -1
CLK1-215ENST00000621181 GOLGA8AA7E2F4 631 aa8.83□□□□□ -1
CLK1-215ENST00000621181 GOLGA8BA8MQT2 603 aa8.83□□□□□ -1
CLK1-215ENST00000621181 CLASP2O75122 1294 aaKnown RBP8.83□□□□□ -1
CLK1-215ENST00000621181 CXCL14O95715 111 aa8.83□□□□□ -1
CLK1-215ENST00000621181 EOMESO95936 686 aa8.83□□□□□ -1
CLK1-215ENST00000621181 BCAR1P56945 870 aa8.83□□□□□ -1
CLK1-215ENST00000621181 FUT2Q10981 343 aa8.83□□□□□ -1
CLK1-215ENST00000621181 NECTIN1Q15223 517 aa8.83□□□□□ -1
CLK1-215ENST00000621181 PRR16Q569H4 304 aa8.83□□□□□ -1
CLK1-215ENST00000621181 BMP2KLQ5H9B9 411 aa8.83□□□□□ -1
CLK1-215ENST00000621181 RNF20Q5VTR2 975 aa8.83□□□□□ -1
CLK1-215ENST00000621181 MCTP2Q6DN12 878 aa8.83□□□□□ -1
CLK1-215ENST00000621181 NLRP7Q8WX94 980 aa8.83□□□□□ -1
CLK1-215ENST00000621181 TCEANC2Q96MN5 208 aa8.83□□□□□ -1
CLK1-215ENST00000621181 ADAMTS10Q9H324 1103 aa8.83□□□□□ -1
CLK1-215ENST00000621181 DMDP11532 3685 aa8.83□□□□□ -1
CLK1-215ENST00000621181 PRR23AA6NEV1 266 aa8.82□□□□□ -1
CLK1-215ENST00000621181 WDR64B1ANS9 1081 aa8.82□□□□□ -1
CLK1-215ENST00000621181 CYP3A4P08684 503 aa8.82□□□□□ -1
CLK1-215ENST00000621181 DARSP14868 501 aaKnown RBP8.82□□□□□ -1
CLK1-215ENST00000621181 FGFR4P22455 802 aa8.82□□□□□ -1
CLK1-215ENST00000621181 NBL1P41271 181 aa8.82□□□□□ -1
CLK1-215ENST00000621181 GPC3P51654 580 aa8.82□□□□□ -1
CLK1-215ENST00000621181 TBC1D8BQ0IIM8 1120 aa8.82□□□□□ -1
CLK1-215ENST00000621181 KIAA1841Q6NSI8 718 aa8.82□□□□□ -1
CLK1-215ENST00000621181 CABP7Q86V35 215 aa8.82□□□□□ -1
CLK1-215ENST00000621181 REXO1Q8N1G1 1221 aaKnown RBP8.82□□□□□ -1
CLK1-215ENST00000621181 EFCAB3Q8N7B9 438 aa8.82□□□□□ -1
CLK1-215ENST00000621181 C12orf76Q8N812 135 aaPredicted RBP8.82□□□□□ -1
CLK1-215ENST00000621181 FLCNQ8NFG4 579 aa8.82□□□□□ -1
CLK1-215ENST00000621181 NKD2Q969F2 451 aaPredicted RBP8.82□□□□□ -1
CLK1-215ENST00000621181 ESYT1Q9BSJ8 1104 aa8.82□□□□□ -1
CLK1-215ENST00000621181 DZANK1Q9NVP4 752 aa8.82□□□□□ -1
CLK1-215ENST00000621181 METRNQ9UJH8 293 aa8.82□□□□□ -1
CLK1-215ENST00000621181 BRPF3Q9ULD4 1205 aa8.82□□□□□ -1
CLK1-215ENST00000621181 KLF18A0A0U1RQI7 1052 aa8.82□□□□□ -1
CLK1-215ENST00000621181 CSDE1O75534 798 aaKnown RBP8.82□□□□□ -1
CLK1-215ENST00000621181 OATP04181 439 aa8.82□□□□□ -1
CLK1-215ENST00000621181 CLCN5P51795 746 aa8.82□□□□□ -1
CLK1-215ENST00000621181 FGD1P98174 961 aa8.82□□□□□ -1
CLK1-215ENST00000621181 PRKCEQ02156 737 aa8.82□□□□□ -1
CLK1-215ENST00000621181 RNASELQ05823 741 aaKnown RBP8.82□□□□□ -1
CLK1-215ENST00000621181 GIT2Q14161 759 aa8.82□□□□□ -1
CLK1-215ENST00000621181 TWF2Q6IBS0 349 aaKnown RBP8.82□□□□□ -1
CLK1-215ENST00000621181 TMC5Q6UXY8 1006 aa8.82□□□□□ -1
CLK1-215ENST00000621181 ZDHHC14Q8IZN3 488 aa8.82□□□□□ -1
CLK1-215ENST00000621181 CCDC12Q8WUD4 166 aaPredicted RBP8.82□□□□□ -1
CLK1-215ENST00000621181 CRYGNQ8WXF5 182 aa8.82□□□□□ -1
CLK1-215ENST00000621181 AUTS2Q8WXX7 1259 aa8.82□□□□□ -1
CLK1-215ENST00000621181 SNX21Q969T3 373 aa8.82□□□□□ -1
CLK1-215ENST00000621181 KIF2CQ99661 725 aa8.82□□□□□ -1
CLK1-215ENST00000621181 ZMYND12Q9H0C1 365 aa8.82□□□□□ -1
CLK1-215ENST00000621181 SLKQ9H2G2 1235 aaPredicted RBP8.82□□□□□ -1
CLK1-215ENST00000621181 DISC1Q9NRI5 854 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms