RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 SBK1Q52WX2 424 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 USP17L6PQ6QN14 398 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 AGGF1Q8N302 714 aaeCLIP15.69■□□□□ 0.1
VPS36-207ENST00000611132 PRPF38AQ8NAV1 312 aaKnown RBP15.69■□□□□ 0.1
VPS36-207ENST00000611132 PIGOQ8TEQ8 1089 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 SNF8Q96H20 258 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 SEMA6BQ9H3T3 888 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 MRPL11Q9Y3B7 192 aaKnown RBP15.69■□□□□ 0.1
VPS36-207ENST00000611132 TMEM94Q12767 1356 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 TMEM120BA0PK00 339 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 ZBTB5O15062 677 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 ANP32DO95626 131 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 PBX1P40424 430 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 MEI1Q5TIA1 1274 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 TTBK2Q6IQ55 1244 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 CPXCR1Q8N123 301 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 TPCN2Q8NHX9 752 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 CENPKQ9BS16 269 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 ATP6V0A4Q9HBG4 840 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 KRT1P04264 644 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 SCP2P22307 547 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 AP3B2Q13367 1082 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 ST13P4Q8IZP2 240 aaPredicted RBP15.69■□□□□ 0.1
VPS36-207ENST00000611132 NEDD1Q8NHV4 660 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 PYROXD1Q8WU10 500 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 HEMGNQ9BXL5 484 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 ROPN1BQ9BZX4 212 aaPredicted RBP15.69■□□□□ 0.1
VPS36-207ENST00000611132 ROPN1Q9HAT0 212 aaPredicted RBP15.69■□□□□ 0.1
VPS36-207ENST00000611132 SLAIN2Q9P270 581 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 KNDC1Q76NI1 1749 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 ACTRT1Q8TDG2 376 aa15.68■□□□□ 0.1
VPS36-207ENST00000611132 ZNF577Q9BSK1 485 aa15.68■□□□□ 0.1
VPS36-207ENST00000611132 NUP85Q9BW27 656 aa15.68■□□□□ 0.1
VPS36-207ENST00000611132 HSD3B7Q9H2F3 369 aa15.68■□□□□ 0.1
VPS36-207ENST00000611132 KCNG1Q9UIX4 513 aa15.68■□□□□ 0.1
VPS36-207ENST00000611132 DCTN4Q9UJW0 460 aa15.68■□□□□ 0.1
VPS36-207ENST00000611132 PITPNM2Q9BZ72 1349 aa15.68■□□□□ 0.1
VPS36-207ENST00000611132 JCADQ9P266 1359 aa15.68■□□□□ 0.1
VPS36-207ENST00000611132 DIP2AQ14689 1571 aa15.68■□□□□ 0.1
VPS36-207ENST00000611132 CLTCQ00610 1675 aaKnown RBP15.68■□□□□ 0.1
VPS36-207ENST00000611132 CDH16O75309 829 aa15.68■□□□□ 0.1
VPS36-207ENST00000611132 SLC8A3P57103 927 aa15.68■□□□□ 0.1
VPS36-207ENST00000611132 KLC1Q07866 573 aa15.68■□□□□ 0.1
VPS36-207ENST00000611132 DMP1Q13316 513 aaPredicted RBP15.68■□□□□ 0.1
VPS36-207ENST00000611132 RNF168Q8IYW5 571 aaPredicted RBP15.68■□□□□ 0.1
VPS36-207ENST00000611132 C1orf54Q8WWF1 131 aa15.68■□□□□ 0.1
VPS36-207ENST00000611132 TTC25Q96NG3 672 aa15.68■□□□□ 0.1
VPS36-207ENST00000611132 FAM129AQ9BZQ8 928 aa15.68■□□□□ 0.1
VPS36-207ENST00000611132 CPP00450 1065 aa15.68■□□□□ 0.1
VPS36-207ENST00000611132 LIG4P49917 911 aa15.68■□□□□ 0.1
VPS36-207ENST00000611132 COPS2P61201 443 aa15.68■□□□□ 0.1
VPS36-207ENST00000611132 COL23A1Q86Y22 540 aaPredicted RBP15.68■□□□□ 0.1
VPS36-207ENST00000611132 FUKQ8N0W3 1084 aa15.68■□□□□ 0.1
VPS36-207ENST00000611132 CNKSR2Q8WXI2 1034 aa15.68■□□□□ 0.1
VPS36-207ENST00000611132 ZKSCAN4Q969J2 545 aaPredicted RBP15.68■□□□□ 0.1
VPS36-207ENST00000611132 FAM81BQ96LP2 452 aa15.68■□□□□ 0.1
VPS36-207ENST00000611132 DUSP9Q99956 384 aaKnown RBP15.68■□□□□ 0.1
VPS36-207ENST00000611132 PACSIN1Q9BY11 444 aa15.68■□□□□ 0.1
VPS36-207ENST00000611132 CARD9Q9H257 536 aa15.68■□□□□ 0.1
VPS36-207ENST00000611132 GDF3Q9NR23 364 aa15.68■□□□□ 0.1
VPS36-207ENST00000611132 STAM2O75886 525 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 ZWINTO95229 277 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 GHRP10912 638 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 NQO1P15559 274 aaKnown RBP15.67■□□□□ 0.1
VPS36-207ENST00000611132 SCNN1DP51172 638 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 KRT17Q04695 432 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 PSMD6Q15008 389 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 BBS9Q3SYG4 887 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 WDR59Q6PJI9 974 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 DDX27Q96GQ7 796 aaKnown RBP15.67■□□□□ 0.1
VPS36-207ENST00000611132 STK33Q9BYT3 514 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 TRIM49P0CI25 452 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 TRIM49CP0CI26 452 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 RFX1P22670 979 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 GCLMP48507 274 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 STAT4Q14765 748 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 ZNF662Q6ZS27 426 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 BARGINQ6ZT62 677 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 SPATA20Q8TB22 786 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 MAML1Q92585 1016 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 GLG1Q92896 1179 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 CYTH2Q99418 400 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 CAND2O75155 1236 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 UBXN2AP68543 259 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 PCDHB4Q9Y5E5 795 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 NPHP3-ACAD11A0A0J9YXS1 232 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 IPO5O00410 1097 aaKnown RBP15.67■□□□□ 0.1
VPS36-207ENST00000611132 HNRNPDLO14979 420 aaKnown RBP15.67■□□□□ 0.1
VPS36-207ENST00000611132 TMEM253P0C7T8 217 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 POLR2BP30876 1174 aaKnown RBP15.67■□□□□ 0.1
VPS36-207ENST00000611132 STAT3P40763 770 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 DYNC1I2Q13409 638 aaKnown RBP15.67■□□□□ 0.1
VPS36-207ENST00000611132 PDIK1LQ8N165 341 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 TEX9Q8N6V9 391 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 FAM20AQ96MK3 541 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 AGPAT1Q99943 283 aa15.67■□□□□ 0.1
VPS36-207ENST00000611132 BAZ2BQ9UIF8 2168 aaKnown RBP15.66■□□□□ 0.1
VPS36-207ENST00000611132 PDE6BP35913 854 aa15.66■□□□□ 0.1
VPS36-207ENST00000611132 TBC1D10BQ4KMP7 808 aaPredicted RBP15.66■□□□□ 0.1
VPS36-207ENST00000611132 KIRREL3Q8IZU9 778 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms