RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-223	ENST00000604624	PRPF18	Q99633	342 aa	Known RBP	4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	GID8	Q9NWU2	228 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SYBU	Q9NX95	663 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	FAM32A	Q9Y421	112 aa	Known RBP	4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	MSH6	P52701	1360 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	RAD50	Q92878	1312 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	HSPA4L	O95757	839 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	ZNF18	P17022	549 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	STAT1	P42224	750 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	VSNL1	P62760	191 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	PRAME	P78395	509 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CYLC2	Q14093	348 aa	Predicted RBP	4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	TERF2	Q15554	542 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	LRRC8E	Q6NSJ5	796 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	KCNV2	Q8TDN2	545 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	THTPA	Q9BU02	230 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	BICC1	Q9H694	974 aa	Known RBP	4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	PCDHB13	Q9Y5F0	798 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	GMEB1	Q9Y692	573 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	LDHC	P07864	332 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	YWHAQ	P27348	245 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	PPARG	P37231	505 aa	Predicted RBP	4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CSNK2B	P67870	215 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	RALGDS	Q12967	914 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	MYBPC2	Q14324	1141 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	TRIM16L	Q309B1	348 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	DCAF4L1	Q3SXM0	396 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	RNF219	Q5W0B1	726 aa	Predicted RBP	4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CENPP	Q6IPU0	288 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	LLGL2	Q6P1M3	1020 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	OR8H2	Q8N162	312 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	ATP11C	Q8NB49	1132 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	AP1S3	Q96PC3	154 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	LBHD1	Q9BQE6	289 aa	Predicted RBP	4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	POLR3E	Q9NVU0	708 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	RTEL1	Q9NZ71	1219 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	TRIM33	Q9UPN9	1127 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	JCAD	Q9P266	1359 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CCDC195	A0A1B0GUA6	201 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	TAF4	O00268	1085 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	FYN	P06241	537 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	AKAP5	P24588	427 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	LRPAP1	P30533	357 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	ADK	P55263	362 aa	Known RBP	4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SPDYA	Q5MJ70	313 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SNX30	Q5VWJ9	437 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	TRIM58	Q8NG06	486 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	JDP2	Q8WYK2	163 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	MNT	Q99583	582 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CNNM2	Q9H8M5	875 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	ADAM21	Q9UKJ8	722 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CCDC151	A5D8V7	595 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SPDYE5	A6NIY4	337 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	RBMXL2	O75526	392 aa	Known RBP	4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	ZMYND10	O75800	440 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	KRT37	O76014	449 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	EIF2S1	P05198	315 aa	Known RBP	4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CYP2J2	P51589	502 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	PPID	Q08752	370 aa	Known RBP	4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CASP10	Q92851	521 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	ULK4	Q96C45	1275 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	EEF2KMT	Q96G04	330 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CALN1	Q9BXU9	219 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	PCDHGB4	Q9UN71	923 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	LOC102724159	A0A0B4J2E5	919 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	WDR64	B1ANS9	1081 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	MDM2	Q00987	491 aa	Predicted RBP	4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	MYL5	Q02045	173 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	LGALS3BP	Q08380	585 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	PDE3A	Q14432	1141 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	PWP2	Q15269	919 aa	Known RBP	4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	ZNF174	Q15697	407 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	FASTKD1	Q53R41	847 aa	Known RBP	4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	LMBRD2	Q68DH5	695 aa	Predicted RBP	4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	FAM172A	Q8WUF8	416 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	MLPH	Q9BV36	600 aa	Predicted RBP	4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	APOL6	Q9BWW8	343 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	PIGU	Q9H490	435 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	NOP53	Q9NZM5	478 aa	Known RBP	4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	ATPIF1	Q9UII2	106 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	TSKS	Q9UJT2	592 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	ATP5J2-PTCD1	G3V325	749 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	TBC1D4	O60343	1298 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	FEN1	P39748	380 aa	Known RBP	4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	LAYN	Q6UX15	382 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	UTS2B	Q765I0	119 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	TXNDC2	Q86VQ3	553 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	NBPF5P	Q86XG9	351 aa	Predicted RBP	4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	RNF135	Q8IUD6	432 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	KCTD6	Q8NC69	237 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CCDC87	Q9NVE4	849 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	RNF14	Q9UBS8	474 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	DTNA	Q9Y4J8	743 aa		4.34	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CFAP99	D6REC4	459 aa		4.34	□□□□□ -1.72
KCNMA1-223	ENST00000604624	MAPK13	O15264	365 aa		4.34	□□□□□ -1.72
KCNMA1-223	ENST00000604624	KRT38	O76015	456 aa		4.34	□□□□□ -1.72
KCNMA1-223	ENST00000604624	KPNA2	P52292	529 aa	Known RBP	4.34	□□□□□ -1.72
KCNMA1-223	ENST00000604624	POU5F1B	Q06416	359 aa		4.34	□□□□□ -1.72
KCNMA1-223	ENST00000604624	DAB2IP	Q5VWQ8	1189 aa		4.34	□□□□□ -1.72
KCNMA1-223	ENST00000604624	FBXW10	Q5XX13	1052 aa		4.34	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 256 ms