RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 CLIC4Q9Y696 253 aa20.77■□□□□ 0.92
PPP4R1-215ENST00000580182 MUTP22033 750 aa20.76■□□□□ 0.91
PPP4R1-215ENST00000580182 ARL2P36404 184 aa20.76■□□□□ 0.91
PPP4R1-215ENST00000580182 KRT79Q5XKE5 535 aa20.76■□□□□ 0.91
PPP4R1-215ENST00000580182 RNF149Q8NC42 400 aa20.76■□□□□ 0.91
PPP4R1-215ENST00000580182 LRFN2Q9ULH4 789 aa20.76■□□□□ 0.91
PPP4R1-215ENST00000580182 PCDHB7Q9Y5E2 793 aa20.76■□□□□ 0.91
PPP4R1-215ENST00000580182 ADGRA3Q8IWK6 1321 aa20.76■□□□□ 0.91
PPP4R1-215ENST00000580182 E9PMD0 336 aa20.75■□□□□ 0.91
PPP4R1-215ENST00000580182 ASAP2O43150 1006 aa20.75■□□□□ 0.91
PPP4R1-215ENST00000580182 STAG3L1P0CL83 205 aa20.75■□□□□ 0.91
PPP4R1-215ENST00000580182 ZSCAN20P17040 1043 aaPredicted RBP20.75■□□□□ 0.91
PPP4R1-215ENST00000580182 SFPQP23246 707 aaKnown RBP eCLIP20.75■□□□□ 0.91
PPP4R1-215ENST00000580182 GLRA2P23416 452 aa20.75■□□□□ 0.91
PPP4R1-215ENST00000580182 FAM189BP81408 668 aa20.75■□□□□ 0.91
PPP4R1-215ENST00000580182 GRIN1Q05586 938 aa20.75■□□□□ 0.91
PPP4R1-215ENST00000580182 ZRSR1Q15695 479 aaKnown RBP20.75■□□□□ 0.91
PPP4R1-215ENST00000580182 PAN2Q504Q3 1202 aaKnown RBP20.75■□□□□ 0.91
PPP4R1-215ENST00000580182 FAM102BQ5T8I3 360 aa20.75■□□□□ 0.91
PPP4R1-215ENST00000580182 ARL6IP4Q66PJ3 421 aaKnown RBP20.75■□□□□ 0.91
PPP4R1-215ENST00000580182 PADI6Q6TGC4 694 aa20.75■□□□□ 0.91
PPP4R1-215ENST00000580182 KCNK18Q7Z418 384 aa20.75■□□□□ 0.91
PPP4R1-215ENST00000580182 FIBCD1Q8N539 461 aa20.75■□□□□ 0.91
PPP4R1-215ENST00000580182 MAFAQ8NHW3 353 aaPredicted RBP20.75■□□□□ 0.91
PPP4R1-215ENST00000580182 GDPD5Q8WTR4 605 aa20.75■□□□□ 0.91
PPP4R1-215ENST00000580182 INO80BQ9C086 356 aaPredicted RBP20.75■□□□□ 0.91
PPP4R1-215ENST00000580182 POLR3FQ9H1D9 316 aaPredicted RBP20.75■□□□□ 0.91
PPP4R1-215ENST00000580182 BHMT2Q9H2M3 363 aa20.75■□□□□ 0.91
PPP4R1-215ENST00000580182 POLD4Q9HCU8 107 aa20.75■□□□□ 0.91
PPP4R1-215ENST00000580182 ARHGEF35A5YM69 484 aa20.74■□□□□ 0.91
PPP4R1-215ENST00000580182 LPXNO60711 386 aa20.74■□□□□ 0.91
PPP4R1-215ENST00000580182 HSP90AA1P07900 732 aaKnown RBP20.74■□□□□ 0.91
PPP4R1-215ENST00000580182 LINC00271P0C7V0 271 aa20.74■□□□□ 0.91
PPP4R1-215ENST00000580182 GRB10Q13322 594 aa20.74■□□□□ 0.91
PPP4R1-215ENST00000580182 CAPSQ13938 189 aa20.74■□□□□ 0.91
PPP4R1-215ENST00000580182 BTG3Q14201 252 aaPredicted RBP20.74■□□□□ 0.91
PPP4R1-215ENST00000580182 CATSPER4Q7RTX7 472 aa20.74■□□□□ 0.91
PPP4R1-215ENST00000580182 PNMA5Q96PV4 448 aa20.74■□□□□ 0.91
PPP4R1-215ENST00000580182 PLIN2Q99541 437 aa20.74■□□□□ 0.91
PPP4R1-215ENST00000580182 STK24Q9Y6E0 443 aa20.74■□□□□ 0.91
PPP4R1-215ENST00000580182 FGFR1P11362 822 aa20.73■□□□□ 0.91
PPP4R1-215ENST00000580182 CEBPZQ03701 1054 aaKnown RBP20.73■□□□□ 0.91
PPP4R1-215ENST00000580182 MXD4Q14582 209 aaPredicted RBP20.73■□□□□ 0.91
PPP4R1-215ENST00000580182 PTPAQ15257 358 aa20.73■□□□□ 0.91
PPP4R1-215ENST00000580182 EPC2Q52LR7 807 aa20.73■□□□□ 0.91
PPP4R1-215ENST00000580182 FAM43BQ6ZT52 329 aaPredicted RBP20.73■□□□□ 0.91
PPP4R1-215ENST00000580182 SRGAP1Q7Z6B7 1085 aa20.73■□□□□ 0.91
PPP4R1-215ENST00000580182 PPM1EQ8WY54 764 aa20.73■□□□□ 0.91
PPP4R1-215ENST00000580182 TMEM161AQ9NX61 479 aa20.73■□□□□ 0.91
PPP4R1-215ENST00000580182 PIN4Q9Y237 131 aaKnown RBP20.73■□□□□ 0.91
PPP4R1-215ENST00000580182 COL4A4P53420 1690 aaPredicted RBP20.73■□□□□ 0.91
PPP4R1-215ENST00000580182 CYP11B2P19099 503 aa20.72■□□□□ 0.91
PPP4R1-215ENST00000580182 PTENP60484 403 aa20.72■□□□□ 0.91
PPP4R1-215ENST00000580182 CCDC85BQ15834 202 aaPredicted RBP20.72■□□□□ 0.91
PPP4R1-215ENST00000580182 FOXD4L5Q5VV16 416 aaPredicted RBP20.72■□□□□ 0.91
PPP4R1-215ENST00000580182 ECHDC2Q86YB7 292 aa20.72■□□□□ 0.91
PPP4R1-215ENST00000580182 TMEM192Q8IY95 271 aa20.72■□□□□ 0.91
PPP4R1-215ENST00000580182 MCPH1Q8NEM0 835 aa20.72■□□□□ 0.91
PPP4R1-215ENST00000580182 FBXO22Q8NEZ5 403 aa20.72■□□□□ 0.91
PPP4R1-215ENST00000580182 FOXD4L4Q8WXT5 416 aaPredicted RBP20.72■□□□□ 0.91
PPP4R1-215ENST00000580182 BSNDQ8WZ55 320 aa20.72■□□□□ 0.91
PPP4R1-215ENST00000580182 ELAC1Q9H777 363 aaKnown RBP20.72■□□□□ 0.91
PPP4R1-215ENST00000580182 CHST12Q9NRB3 414 aa20.72■□□□□ 0.91
PPP4R1-215ENST00000580182 RNF19AQ9NV58 838 aa20.72■□□□□ 0.91
PPP4R1-215ENST00000580182 MRPL42Q9Y6G3 142 aaKnown RBP20.72■□□□□ 0.91
PPP4R1-215ENST00000580182 A0A0U1RQF3 1178 aa20.71■□□□□ 0.91
PPP4R1-215ENST00000580182 TBKBP1A7MCY6 615 aa20.71■□□□□ 0.91
PPP4R1-215ENST00000580182 EYA4O95677 639 aa20.71■□□□□ 0.91
PPP4R1-215ENST00000580182 BMP15O95972 392 aa20.71■□□□□ 0.91
PPP4R1-215ENST00000580182 MARCKSP29966 332 aaPredicted RBP20.71■□□□□ 0.91
PPP4R1-215ENST00000580182 PHKA2P46019 1235 aa20.71■□□□□ 0.91
PPP4R1-215ENST00000580182 TFDP1Q14186 410 aa20.71■□□□□ 0.91
PPP4R1-215ENST00000580182 HYIQ5T013 277 aa20.71■□□□□ 0.91
PPP4R1-215ENST00000580182 CMTR2Q8IYT2 770 aaKnown RBP20.71■□□□□ 0.91
PPP4R1-215ENST00000580182 RNF169Q8NCN4 708 aa20.71■□□□□ 0.91
PPP4R1-215ENST00000580182 AGPAT5Q9NUQ2 364 aa20.71■□□□□ 0.91
PPP4R1-215ENST00000580182 HCSTQ9UBK5 93 aa20.71■□□□□ 0.91
PPP4R1-215ENST00000580182 DNM3Q9UQ16 869 aa20.71■□□□□ 0.91
PPP4R1-215ENST00000580182 MTCH2Q9Y6C9 303 aa20.71■□□□□ 0.91
PPP4R1-215ENST00000580182 NLRC5Q86WI3 1866 aa20.71■□□□□ 0.91
PPP4R1-215ENST00000580182 TRANK1O15050 2925 aa20.7■□□□□ 0.9
PPP4R1-215ENST00000580182 INO80B-WBP1J3KQ70 363 aa20.7■□□□□ 0.9
PPP4R1-215ENST00000580182 ATF7P17544 494 aaPredicted RBP20.7■□□□□ 0.9
PPP4R1-215ENST00000580182 HOXA11P31270 313 aaPredicted RBP20.7■□□□□ 0.9
PPP4R1-215ENST00000580182 MBTD1Q05BQ5 628 aa20.7■□□□□ 0.9
PPP4R1-215ENST00000580182 POU5F1BQ06416 359 aa20.7■□□□□ 0.9
PPP4R1-215ENST00000580182 LONRF3Q496Y0 759 aa20.7■□□□□ 0.9
PPP4R1-215ENST00000580182 TWF2Q6IBS0 349 aaKnown RBP20.7■□□□□ 0.9
PPP4R1-215ENST00000580182 ZNF598Q86UK7 904 aaKnown RBP20.7■□□□□ 0.9
PPP4R1-215ENST00000580182 CABP7Q86V35 215 aa20.7■□□□□ 0.9
PPP4R1-215ENST00000580182 IFNLR1Q8IU57 520 aaPredicted RBP20.7■□□□□ 0.9
PPP4R1-215ENST00000580182 MICALL1Q8N3F8 863 aa20.7■□□□□ 0.9
PPP4R1-215ENST00000580182 USP28Q96RU2 1077 aa20.7■□□□□ 0.9
PPP4R1-215ENST00000580182 ZSCAN16Q9H4T2 348 aaPredicted RBP20.7■□□□□ 0.9
PPP4R1-215ENST00000580182 DACT1Q9NYF0 836 aa20.7■□□□□ 0.9
PPP4R1-215ENST00000580182 FNDC1Q4ZHG4 1894 aaPredicted RBP20.7■□□□□ 0.9
PPP4R1-215ENST00000580182 LRRIQ4A6NIV6 560 aa20.69■□□□□ 0.9
PPP4R1-215ENST00000580182 CTNNB1P35222 781 aa20.69■□□□□ 0.9
PPP4R1-215ENST00000580182 BMPR1AP36894 532 aa20.69■□□□□ 0.9
PPP4R1-215ENST00000580182 PKP1Q13835 747 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms