RNA–Protein interactions for RNA: ENST00000566254.1

CFDP1-206, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-206ENST00000566254 HIF3AQ9Y2N7 669 aa10.37□□□□□ -0.75
CFDP1-206ENST00000566254 MTCH2Q9Y6C9 303 aa10.37□□□□□ -0.75
CFDP1-206ENST00000566254 GBF1Q92538 1859 aa10.36□□□□□ -0.75
CFDP1-206ENST00000566254 DUSP11O75319 330 aaKnown RBP10.36□□□□□ -0.75
CFDP1-206ENST00000566254 CST5P28325 142 aaPredicted RBP10.36□□□□□ -0.75
CFDP1-206ENST00000566254 CCL23P55773 120 aa10.36□□□□□ -0.75
CFDP1-206ENST00000566254 TMED8Q6PL24 325 aaPredicted RBP10.36□□□□□ -0.75
CFDP1-206ENST00000566254 SIAH1Q8IUQ4 282 aa10.36□□□□□ -0.75
CFDP1-206ENST00000566254 HNRNPLLQ8WVV9 542 aaKnown RBP10.36□□□□□ -0.75
CFDP1-206ENST00000566254 OSBPL2Q9H1P3 480 aa10.36□□□□□ -0.75
CFDP1-206ENST00000566254 HIPK3Q9H422 1215 aa10.36□□□□□ -0.75
CFDP1-206ENST00000566254 VCPKMTQ9H867 229 aa10.36□□□□□ -0.75
CFDP1-206ENST00000566254 CERS4Q9HA82 394 aa10.36□□□□□ -0.75
CFDP1-206ENST00000566254 SUGCTQ9HAC7 445 aa10.36□□□□□ -0.75
CFDP1-206ENST00000566254 PAG1Q9NWQ8 432 aa10.36□□□□□ -0.75
CFDP1-206ENST00000566254 REV1Q9UBZ9 1251 aa10.36□□□□□ -0.75
CFDP1-206ENST00000566254 PRAMEF27A3QJZ7 478 aa10.35□□□□□ -0.75
CFDP1-206ENST00000566254 EPOPA6NHQ4 379 aa10.35□□□□□ -0.75
CFDP1-206ENST00000566254 WDR46O15213 610 aaKnown RBP10.35□□□□□ -0.75
CFDP1-206ENST00000566254 SMARCA5O60264 1052 aaPredicted RBP10.35□□□□□ -0.75
CFDP1-206ENST00000566254 CD4P01730 458 aa10.35□□□□□ -0.75
CFDP1-206ENST00000566254 STAT3P40763 770 aa10.35□□□□□ -0.75
CFDP1-206ENST00000566254 ICA1Q05084 483 aa10.35□□□□□ -0.75
CFDP1-206ENST00000566254 PDE4BQ07343 736 aa10.35□□□□□ -0.75
CFDP1-206ENST00000566254 SERINC3Q13530 473 aa10.35□□□□□ -0.75
CFDP1-206ENST00000566254 PRRT3Q5FWE3 981 aa10.35□□□□□ -0.75
CFDP1-206ENST00000566254 PPM1JQ5JR12 505 aa10.35□□□□□ -0.75
CFDP1-206ENST00000566254 C20orf194Q5TEA3 1177 aa10.35□□□□□ -0.75
CFDP1-206ENST00000566254 TMEM179Q6ZVK1 233 aa10.35□□□□□ -0.75
CFDP1-206ENST00000566254 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.35□□□□□ -0.75
CFDP1-206ENST00000566254 SIRT2Q8IXJ6 389 aa10.35□□□□□ -0.75
CFDP1-206ENST00000566254 PCSK9Q8NBP7 692 aaKnown RBP10.35□□□□□ -0.75
CFDP1-206ENST00000566254 SMG8Q8ND04 991 aaKnown RBP10.35□□□□□ -0.75
CFDP1-206ENST00000566254 SDR42E1Q8WUS8 393 aa10.35□□□□□ -0.75
CFDP1-206ENST00000566254 LRRCC1Q9C099 1032 aa10.35□□□□□ -0.75
CFDP1-206ENST00000566254 WNT10AQ9GZT5 417 aa10.35□□□□□ -0.75
CFDP1-206ENST00000566254 ARMT1Q9H993 441 aa10.35□□□□□ -0.75
CFDP1-206ENST00000566254 NOP53Q9NZM5 478 aaKnown RBP10.35□□□□□ -0.75
CFDP1-206ENST00000566254 CRIM1Q9NZV1 1036 aa10.35□□□□□ -0.75
CFDP1-206ENST00000566254 ZNF214Q9UL59 606 aaPredicted RBP10.35□□□□□ -0.75
CFDP1-206ENST00000566254 ADAMTS5Q9UNA0 930 aa10.35□□□□□ -0.75
CFDP1-206ENST00000566254 TMX2Q9Y320 296 aa10.35□□□□□ -0.75
CFDP1-206ENST00000566254 PCDHA11Q9Y5I1 949 aa10.35□□□□□ -0.75
CFDP1-206ENST00000566254 SLC4A7Q9Y6M7 1214 aa10.35□□□□□ -0.75
CFDP1-206ENST00000566254 LRRC37A2A6NM11 1700 aa10.35□□□□□ -0.75
CFDP1-206ENST00000566254 MUC6Q6W4X9 2439 aa10.35□□□□□ -0.75
CFDP1-206ENST00000566254 PIEZO1Q92508 2521 aa10.35□□□□□ -0.75
CFDP1-206ENST00000566254 ZNFX1Q9P2E3 1918 aaKnown RBP10.35□□□□□ -0.75
CFDP1-206ENST00000566254 MEIS3P2A8K0S8 358 aa10.34□□□□□ -0.75
CFDP1-206ENST00000566254 VWA5AO00534 786 aa10.34□□□□□ -0.75
CFDP1-206ENST00000566254 MBD4O95243 580 aa10.34□□□□□ -0.75
CFDP1-206ENST00000566254 CA3P07451 260 aa10.34□□□□□ -0.75
CFDP1-206ENST00000566254 CYP2D6P10635 497 aa10.34□□□□□ -0.75
CFDP1-206ENST00000566254 AKR1B1P15121 316 aa10.34□□□□□ -0.75
CFDP1-206ENST00000566254 ATP2A2P16615 1042 aaKnown RBP10.34□□□□□ -0.75
CFDP1-206ENST00000566254 PLCG1P19174 1290 aa10.34□□□□□ -0.75
CFDP1-206ENST00000566254 MRE11P49959 708 aa10.34□□□□□ -0.75
CFDP1-206ENST00000566254 GJA9P57773 515 aa10.34□□□□□ -0.75
CFDP1-206ENST00000566254 BEX3Q00994 111 aa10.34□□□□□ -0.75
CFDP1-206ENST00000566254 RAB33AQ14088 237 aa10.34□□□□□ -0.75
CFDP1-206ENST00000566254 LRRFIP1Q32MZ4 808 aaKnown RBP10.34□□□□□ -0.75
CFDP1-206ENST00000566254 TMEM201Q5SNT2 666 aa10.34□□□□□ -0.75
CFDP1-206ENST00000566254 LCORLQ8N3X6 602 aa10.34□□□□□ -0.75
CFDP1-206ENST00000566254 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.34□□□□□ -0.75
CFDP1-206ENST00000566254 DYNLL2Q96FJ2 89 aa10.34□□□□□ -0.75
CFDP1-206ENST00000566254 GPATCH3Q96I76 525 aa10.34□□□□□ -0.75
CFDP1-206ENST00000566254 SNX27Q96L92 541 aa10.34□□□□□ -0.75
CFDP1-206ENST00000566254 RIOK1Q9BRS2 568 aaKnown RBP10.34□□□□□ -0.75
CFDP1-206ENST00000566254 UPF3AQ9H1J1 476 aaKnown RBP10.34□□□□□ -0.75
CFDP1-206ENST00000566254 WNT8AQ9H1J5 351 aa10.34□□□□□ -0.75
CFDP1-206ENST00000566254 ZSWIM4Q9H7M6 989 aa10.34□□□□□ -0.75
CFDP1-206ENST00000566254 SPC25Q9HBM1 224 aa10.34□□□□□ -0.75
CFDP1-206ENST00000566254 CYP4F12Q9HCS2 524 aa10.34□□□□□ -0.75
CFDP1-206ENST00000566254 CD320Q9NPF0 282 aa10.34□□□□□ -0.75
CFDP1-206ENST00000566254 COG5Q9UP83 839 aa10.34□□□□□ -0.75
CFDP1-206ENST00000566254 PRRC2BQ5JSZ5 2229 aaKnown RBP10.34□□□□□ -0.75
CFDP1-206ENST00000566254 COL11A1P12107 1806 aaPredicted RBP10.33□□□□□ -0.76
CFDP1-206ENST00000566254 PI4K2BG5E9Z4 385 aa10.33□□□□□ -0.76
CFDP1-206ENST00000566254 SMIM22K7EJ46 135 aa10.33□□□□□ -0.76
CFDP1-206ENST00000566254 CTAGE5O15320 804 aa10.33□□□□□ -0.76
CFDP1-206ENST00000566254 ADH5P11766 374 aa10.33□□□□□ -0.76
CFDP1-206ENST00000566254 ATP5JP18859 108 aa10.33□□□□□ -0.76
CFDP1-206ENST00000566254 POU3F3P20264 500 aaPredicted RBP10.33□□□□□ -0.76
CFDP1-206ENST00000566254 ACVR2BQ13705 512 aa10.33□□□□□ -0.76
CFDP1-206ENST00000566254 ZBTB37Q5TC79 503 aa10.33□□□□□ -0.76
CFDP1-206ENST00000566254 ZSCAN25Q6NSZ9 544 aa10.33□□□□□ -0.76
CFDP1-206ENST00000566254 CXCL17Q6UXB2 119 aa10.33□□□□□ -0.76
CFDP1-206ENST00000566254 MAMDC4Q6UXC1 1216 aa10.33□□□□□ -0.76
CFDP1-206ENST00000566254 MSL3Q8N5Y2 521 aaKnown RBP10.33□□□□□ -0.76
CFDP1-206ENST00000566254 REPS2Q8NFH8 660 aa10.33□□□□□ -0.76
CFDP1-206ENST00000566254 TMEM40Q8WWA1 233 aa10.33□□□□□ -0.76
CFDP1-206ENST00000566254 VWCEQ96DN2 955 aa10.33□□□□□ -0.76
CFDP1-206ENST00000566254 DDX11Q96FC9 970 aa10.33□□□□□ -0.76
CFDP1-206ENST00000566254 SCLYQ96I15 445 aa10.33□□□□□ -0.76
CFDP1-206ENST00000566254 FANCD2OSQ96PS1 177 aa10.33□□□□□ -0.76
CFDP1-206ENST00000566254 PIF1Q9H611 641 aa10.33□□□□□ -0.76
CFDP1-206ENST00000566254 DISC1Q9NRI5 854 aa10.33□□□□□ -0.76
CFDP1-206ENST00000566254 ADAM30Q9UKF2 790 aa10.33□□□□□ -0.76
CFDP1-206ENST00000566254 PARP14Q460N5 1801 aa10.33□□□□□ -0.76
CFDP1-206ENST00000566254 CNTNAP5Q8WYK1 1306 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms