RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 SDCCAG8Q86SQ7 713 aaPredicted RBP15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 SYCP3Q8IZU3 236 aa15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 FGD4Q96M96 766 aa15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 DUSP9Q99956 384 aaKnown RBP15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 SPZ1Q9BXG8 430 aa15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 AP1M1Q9BXS5 423 aa15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 ADAM7Q9H2U9 754 aa15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 TMEM59LQ9UK28 342 aa15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 SLX4Q8IY92 1834 aa15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 MMP13P45452 471 aa15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 PLS1Q14651 629 aa15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 KIAA0753Q2KHM9 967 aa15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 MEI1Q5TIA1 1274 aa15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 DTHD1Q6ZMT9 781 aa15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 MYLK4Q86YV6 388 aaPredicted RBP15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 TMEM165Q9HC07 324 aa15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 ATP8A1Q9Y2Q0 1164 aa15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 USP15Q9Y4E8 981 aaPredicted RBP15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 SCN9AQ15858 1988 aa15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 SMIM23A6NLE4 172 aa15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 KCNK3O14649 394 aa15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 STAT6P42226 847 aa15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 ASRGL1Q7L266 308 aa15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 ANKRD23Q86SG2 305 aa15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 GBP7Q8N8V2 638 aaPredicted RBP15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 PHC3Q8NDX5 983 aa15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 DTNBP1Q96EV8 351 aa15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 ZMYND12Q9H0C1 365 aa15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 DDX47Q9H0S4 455 aaKnown RBP15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 MMADHCQ9H3L0 296 aaPredicted RBP15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 DNAJC18Q9H819 358 aa15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 MMRN2Q9H8L6 949 aa15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 DNAAF2Q9NVR5 837 aaKnown RBP15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 ZNF232Q9UNY5 417 aa15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 SOGA3Q5TF21 947 aa15.15■□□□□ 0.02
GTF3C1-203ENST00000562609 HOOK3Q86VS8 718 aa15.15■□□□□ 0.02
GTF3C1-203ENST00000562609 TAF4BQ92750 862 aa15.15■□□□□ 0.02
GTF3C1-203ENST00000562609 VCXQ9H320 206 aa15.15■□□□□ 0.02
GTF3C1-203ENST00000562609 OCEL1Q9H607 264 aa15.15■□□□□ 0.02
GTF3C1-203ENST00000562609 GOPCQ9HD26 462 aa15.15■□□□□ 0.02
GTF3C1-203ENST00000562609 WFS1O76024 890 aa15.15■□□□□ 0.02
GTF3C1-203ENST00000562609 MYL1P05976 194 aa15.15■□□□□ 0.02
GTF3C1-203ENST00000562609 CALB2P22676 271 aa15.15■□□□□ 0.02
GTF3C1-203ENST00000562609 PDE6CP51160 858 aa15.15■□□□□ 0.02
GTF3C1-203ENST00000562609 TDRD12Q587J7 1177 aaKnown RBP15.15■□□□□ 0.02
GTF3C1-203ENST00000562609 PODNQ7Z5L7 613 aa15.15■□□□□ 0.02
GTF3C1-203ENST00000562609 APBB1IPQ7Z5R6 666 aaPredicted RBP15.15■□□□□ 0.02
GTF3C1-203ENST00000562609 FLAD1Q8NFF5 587 aa15.15■□□□□ 0.02
GTF3C1-203ENST00000562609 TBCKQ8TEA7 893 aa15.15■□□□□ 0.02
GTF3C1-203ENST00000562609 RNPEPL1Q9HAU8 725 aa15.15■□□□□ 0.02
GTF3C1-203ENST00000562609 ABCD1P33897 745 aa15.14■□□□□ 0.01
GTF3C1-203ENST00000562609 PEX5P50542 639 aa15.14■□□□□ 0.01
GTF3C1-203ENST00000562609 EIF3BP55884 814 aaKnown RBP15.14■□□□□ 0.01
GTF3C1-203ENST00000562609 OR52E8Q6IFG1 317 aa15.14■□□□□ 0.01
GTF3C1-203ENST00000562609 LRRC15Q8TF66 581 aa15.14■□□□□ 0.01
GTF3C1-203ENST00000562609 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.14■□□□□ 0.01
GTF3C1-203ENST00000562609 TTLL1O95922 423 aa15.14■□□□□ 0.01
GTF3C1-203ENST00000562609 KLRC1P26715 233 aa15.14■□□□□ 0.01
GTF3C1-203ENST00000562609 IFI35P80217 286 aaPredicted RBP15.14■□□□□ 0.01
GTF3C1-203ENST00000562609 MYBPC3Q14896 1274 aa15.14■□□□□ 0.01
GTF3C1-203ENST00000562609 FOXB2Q5VYV0 432 aa15.14■□□□□ 0.01
GTF3C1-203ENST00000562609 HHIPL2Q6UWX4 724 aa15.14■□□□□ 0.01
GTF3C1-203ENST00000562609 LZTS2Q9BRK4 669 aa15.14■□□□□ 0.01
GTF3C1-203ENST00000562609 MMTAG2Q9BU76 263 aaKnown RBP15.14■□□□□ 0.01
GTF3C1-203ENST00000562609 DPH5Q9H2P9 285 aa15.14■□□□□ 0.01
GTF3C1-203ENST00000562609 TDRD3Q9H7E2 651 aaKnown RBP15.14■□□□□ 0.01
GTF3C1-203ENST00000562609 C6orf50Q9HD87 102 aa15.14■□□□□ 0.01
GTF3C1-203ENST00000562609 AMACRQ9UHK6 382 aa15.14■□□□□ 0.01
GTF3C1-203ENST00000562609 CEP104O60308 925 aa15.13■□□□□ 0.01
GTF3C1-203ENST00000562609 SUN1O94901 812 aa15.13■□□□□ 0.01
GTF3C1-203ENST00000562609 UBA7P41226 1012 aa15.13■□□□□ 0.01
GTF3C1-203ENST00000562609 TECP42680 631 aa15.13■□□□□ 0.01
GTF3C1-203ENST00000562609 UBE2SQ16763 222 aa15.13■□□□□ 0.01
GTF3C1-203ENST00000562609 ASTE1Q2TB18 679 aaPredicted RBP15.13■□□□□ 0.01
GTF3C1-203ENST00000562609 DACT2Q5SW24 774 aa15.13■□□□□ 0.01
GTF3C1-203ENST00000562609 FITM2Q8N6M3 262 aa15.13■□□□□ 0.01
GTF3C1-203ENST00000562609 UCMAQ8WVF2 138 aa15.13■□□□□ 0.01
GTF3C1-203ENST00000562609 GJA10Q969M2 543 aa15.13■□□□□ 0.01
GTF3C1-203ENST00000562609 PYM1Q9BRP8 204 aaKnown RBP15.13■□□□□ 0.01
GTF3C1-203ENST00000562609 SUGT1Q9Y2Z0 365 aa15.13■□□□□ 0.01
GTF3C1-203ENST00000562609 SMAPO00193 183 aa15.13■□□□□ 0.01
GTF3C1-203ENST00000562609 GDF11O95390 407 aa15.13■□□□□ 0.01
GTF3C1-203ENST00000562609 OAS1P00973 400 aaKnown RBP15.13■□□□□ 0.01
GTF3C1-203ENST00000562609 HLA-DOAP06340 250 aa15.13■□□□□ 0.01
GTF3C1-203ENST00000562609 RNASELQ05823 741 aaKnown RBP15.13■□□□□ 0.01
GTF3C1-203ENST00000562609 NONOQ15233 471 aaKnown RBP eCLIP15.13■□□□□ 0.01
GTF3C1-203ENST00000562609 NAALADL2Q58DX5 795 aa15.13■□□□□ 0.01
GTF3C1-203ENST00000562609 ACBD5Q5T8D3 534 aaPredicted RBP15.13■□□□□ 0.01
GTF3C1-203ENST00000562609 ANKRD40Q6AI12 368 aa15.13■□□□□ 0.01
GTF3C1-203ENST00000562609 SH3BP5LQ7L8J4 393 aa15.13■□□□□ 0.01
GTF3C1-203ENST00000562609 ADGRF4Q8IZF3 695 aa15.13■□□□□ 0.01
GTF3C1-203ENST00000562609 SCFD2Q8WU76 684 aa15.13■□□□□ 0.01
GTF3C1-203ENST00000562609 DNAJC9Q8WXX5 260 aa15.13■□□□□ 0.01
GTF3C1-203ENST00000562609 FGFR1OP2Q9NVK5 253 aa15.13■□□□□ 0.01
GTF3C1-203ENST00000562609 FAM198AQ9UFP1 575 aa15.13■□□□□ 0.01
GTF3C1-203ENST00000562609 USP17L10C9JJH3 530 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 PPP1R11O60927 126 aaPredicted RBP15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 TPBGLP0DKB5 382 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 LONP1P36776 959 aaKnown RBP15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 SNAP25P60880 206 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms