RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 USP3Q9Y6I4 520 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 BAZ2AQ9UIF9 1905 aaKnown RBP6.22□□□□□ -1.41
HERC1-213ENST00000561359 DSPP15924 2871 aaKnown RBP6.22□□□□□ -1.41
HERC1-213ENST00000561359 ZBED9Q6R2W3 1325 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.21□□□□□ -1.42
HERC1-213ENST00000561359 KRBA1A5PL33 1030 aa6.21□□□□□ -1.42
HERC1-213ENST00000561359 PALM3A6NDB9 673 aaPredicted RBP6.21□□□□□ -1.42
HERC1-213ENST00000561359 HIDE1A8MVS5 230 aa6.21□□□□□ -1.42
HERC1-213ENST00000561359 H3BRB1 525 aa6.21□□□□□ -1.42
HERC1-213ENST00000561359 FSCN2O14926 492 aa6.21□□□□□ -1.42
HERC1-213ENST00000561359 CHRNA1P02708 482 aa6.21□□□□□ -1.42
HERC1-213ENST00000561359 BMP4P12644 408 aa6.21□□□□□ -1.42
HERC1-213ENST00000561359 HOXD8P13378 290 aaPredicted RBP6.21□□□□□ -1.42
HERC1-213ENST00000561359 ATP4AP20648 1035 aa6.21□□□□□ -1.42
HERC1-213ENST00000561359 GATMP50440 423 aa6.21□□□□□ -1.42
HERC1-213ENST00000561359 CLDN10P78369 228 aa6.21□□□□□ -1.42
HERC1-213ENST00000561359 SHC2P98077 582 aa6.21□□□□□ -1.42
HERC1-213ENST00000561359 LPIN1Q14693 890 aa6.21□□□□□ -1.42
HERC1-213ENST00000561359 SBK1Q52WX2 424 aa6.21□□□□□ -1.42
HERC1-213ENST00000561359 FAM26DQ5JW98 314 aa6.21□□□□□ -1.42
HERC1-213ENST00000561359 TBCELQ5QJ74 424 aa6.21□□□□□ -1.42
HERC1-213ENST00000561359 SYDE2Q5VT97 1194 aa6.21□□□□□ -1.42
HERC1-213ENST00000561359 TTBK2Q6IQ55 1244 aa6.21□□□□□ -1.42
HERC1-213ENST00000561359 RASGRP2Q7LDG7 609 aa6.21□□□□□ -1.42
HERC1-213ENST00000561359 OTOP3Q7RTS5 596 aa6.21□□□□□ -1.42
HERC1-213ENST00000561359 SLC9A9Q8IVB4 645 aa6.21□□□□□ -1.42
HERC1-213ENST00000561359 C12orf76Q8N812 135 aaPredicted RBP6.21□□□□□ -1.42
HERC1-213ENST00000561359 SSH3Q8TE77 659 aa6.21□□□□□ -1.42
HERC1-213ENST00000561359 NSUN6Q8TEA1 469 aaKnown RBP6.21□□□□□ -1.42
HERC1-213ENST00000561359 ACDQ96AP0 544 aa6.21□□□□□ -1.42
HERC1-213ENST00000561359 BORCS6Q96GS4 357 aa6.21□□□□□ -1.42
HERC1-213ENST00000561359 TCF25Q9BQ70 676 aa6.21□□□□□ -1.42
HERC1-213ENST00000561359 BCL11AQ9H165 835 aa6.21□□□□□ -1.42
HERC1-213ENST00000561359 TUT1Q9H6E5 874 aaKnown RBP6.21□□□□□ -1.42
HERC1-213ENST00000561359 KCNK12Q9HB15 430 aa6.21□□□□□ -1.42
HERC1-213ENST00000561359 NGRNQ9NPE2 291 aaKnown RBP6.21□□□□□ -1.42
HERC1-213ENST00000561359 SETD4Q9NVD3 440 aa6.21□□□□□ -1.42
HERC1-213ENST00000561359 SCHIP1Q9P0W5 487 aaPredicted RBP6.21□□□□□ -1.42
HERC1-213ENST00000561359 WNT16Q9UBV4 365 aa6.21□□□□□ -1.42
HERC1-213ENST00000561359 PUF60Q9UHX1 559 aaKnown RBP6.21□□□□□ -1.42
HERC1-213ENST00000561359 STX8Q9UNK0 236 aa6.21□□□□□ -1.42
HERC1-213ENST00000561359 LCTP09848 1927 aa6.21□□□□□ -1.42
HERC1-213ENST00000561359 NBEAQ8NFP9 2946 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 TTC3P53804 2025 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 A0A1W2PNR3 127 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 LAMTOR5O43504 91 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 NARSO43776 548 aaKnown RBP6.2□□□□□ -1.42
HERC1-213ENST00000561359 CHGBP05060 677 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 SCG2P13521 617 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 FGFR3P22607 806 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 TGM1P22735 817 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 PMLP29590 882 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 HOXC8P31273 242 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 CA8P35219 290 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 ARHGAP4P98171 946 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 ATP8B2P98198 1209 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 TFAP4Q01664 338 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 CSTF1Q05048 431 aaKnown RBP6.2□□□□□ -1.42
HERC1-213ENST00000561359 NONOQ15233 471 aaKnown RBP eCLIP6.2□□□□□ -1.42
HERC1-213ENST00000561359 HSDL1Q3SXM5 330 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 N4BP2L1Q5TBK1 243 aaPredicted RBP6.2□□□□□ -1.42
HERC1-213ENST00000561359 KIAA1841Q6NSI8 718 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 LRSAM1Q6UWE0 723 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 TMC7Q7Z402 723 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 RSPH3Q86UC2 560 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 NLRP8Q86W28 1048 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 TMEM87AQ8NBN3 555 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 LINC01599Q8WXQ3 324 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 DDX1Q92499 740 aaKnown RBP6.2□□□□□ -1.42
HERC1-213ENST00000561359 SCARF2Q96GP6 870 aaPredicted RBP6.2□□□□□ -1.42
HERC1-213ENST00000561359 GPR20Q99678 358 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 C16orf70Q9BSU1 422 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 OXCT2Q9BYC2 517 aaPredicted RBP6.2□□□□□ -1.42
HERC1-213ENST00000561359 ZCCHC2Q9C0B9 1178 aaKnown RBP6.2□□□□□ -1.42
HERC1-213ENST00000561359 PUS7LQ9H0K6 701 aaKnown RBP6.2□□□□□ -1.42
HERC1-213ENST00000561359 EHMT1Q9H9B1 1298 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 NEUROD4Q9HD90 331 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 PARD6AQ9NPB6 346 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 SPATA6Q9NWH7 488 aaPredicted RBP6.2□□□□□ -1.42
HERC1-213ENST00000561359 PAG1Q9NWQ8 432 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 ZDHHC3Q9NYG2 299 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 PNMA2Q9UL42 364 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 KIAA1024Q9UPX6 916 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 NOP58Q9Y2X3 529 aaKnown RBP6.2□□□□□ -1.42
HERC1-213ENST00000561359 PCDHGA2Q9Y5H1 932 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 HCFC2Q9Y5Z7 792 aa6.2□□□□□ -1.42
HERC1-213ENST00000561359 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.2□□□□□ -1.42
HERC1-213ENST00000561359 HELZ2Q9BYK8 2649 aaKnown RBP6.19□□□□□ -1.42
HERC1-213ENST00000561359 TBKBP1A7MCY6 615 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 GSG1L2A8MUP6 293 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 C1QTNF9BB2RNN3 333 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 ATXN7O15265 892 aaPredicted RBP6.19□□□□□ -1.42
HERC1-213ENST00000561359 BNIP3LO60238 219 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 EIF3JO75822 258 aaKnown RBP6.19□□□□□ -1.42
HERC1-213ENST00000561359 GGPS1O95749 300 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 LGALS2P05162 132 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 C1QTNF9P0C862 333 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 EIF2AK2P19525 551 aaKnown RBP6.19□□□□□ -1.42
HERC1-213ENST00000561359 CD52P31358 61 aa6.19□□□□□ -1.42
HERC1-213ENST00000561359 TDO2P48775 406 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms