RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 CFAP100Q494V2 611 aa4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 ANKDD1AQ495B1 522 aa4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 FBLN7Q53RD9 439 aa4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 XRRA1Q6P2D8 792 aa4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 OGFOD3Q6PK18 319 aa4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 LDHAL6AQ6ZMR3 332 aa4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 ARHGAP27Q6ZUM4 889 aa4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 TBC1D1Q86TI0 1168 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 ATG4DQ86TL0 474 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 ZSWIM2Q8NEG5 633 aa4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 BCL7CQ8WUZ0 217 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 RUBCNQ92622 972 aa4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 CDKL2Q92772 493 aa4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 ATP2A3Q93084 1043 aa4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 PLEKHG4BQ96PX9 1271 aa4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 HAUS7Q99871 368 aa4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 TRIM56Q9BRZ2 755 aaKnown RBP4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 KATNAL1Q9BW62 490 aa4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 TARS2Q9BW92 718 aaKnown RBP4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 SLC26A6Q9BXS9 759 aa4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 KRTAP4-9Q9BYQ8 210 aa4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 CHRDQ9H2X0 955 aa4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 CLEC4MQ9H2X3 399 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 KCTD10Q9H3F6 313 aa4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 SEMA6CQ9H3T2 930 aa4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 LUC7LQ9NQ29 371 aaKnown RBP4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 ZNF624Q9P2J8 865 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 TEKT2Q9UIF3 430 aa4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 SH3BGRL2Q9UJC5 107 aa4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 ZNF112Q9UJU3 913 aa4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 COG5Q9UP83 839 aa4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 DAGLAQ9Y4D2 1042 aa4.98□□□□□ -1.61
HMGB3P26-201ENST00000560051 SPAG9O60271 1321 aaKnown RBP4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 TNKSO95271 1327 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 KDRP35968 1356 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 TSPY2A6NKD2 308 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 B4DLN1 442 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 GABRDO14764 452 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 AREL1O15033 823 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 CETN3O15182 167 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 ZBTB43O43298 467 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 TIPRLO75663 272 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 RFPL3O75679 317 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 SLITRK3O94933 977 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 GJB6O95452 261 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 FAM153BP0C7A2 387 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 TSPY3P0CV98 308 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 TSPY8P0CW00 308 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 MTHFD1P11586 935 aaKnown RBP4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 GZMAP12544 262 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 GNAT2P19087 354 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 SFPQP23246 707 aaKnown RBP eCLIP4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 GBP2P32456 591 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 ELF1P32519 619 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 CD86P42081 329 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 SKIV2L2P42285 1042 aaKnown RBP4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 NOP2P46087 812 aaKnown RBP4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 PEX5P50542 639 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 PSMD7P51665 324 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 RCAN1P53805 252 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 TSPY1Q01534 308 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 RELQ04864 619 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 RUNX1T1Q06455 604 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 PCDH1Q08174 1060 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 PPFIA1Q13136 1202 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 GRM1Q13255 1194 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 SP140Q13342 867 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 GRM3Q14832 879 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 PPP2R5EQ16537 467 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 PROSER3Q2NL68 480 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 GPR158Q5T848 1215 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 RNF219Q5W0B1 726 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 NUGGCQ68CJ6 796 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 C8orf74Q6P047 294 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 FBXL19Q6PCT2 694 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 KDELC2Q7Z4H8 507 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 PPP1R42Q7Z4L9 355 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 VSIG1Q86XK7 387 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 GALNT13Q8IUC8 556 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 EPHX4Q8IUS5 362 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 PCSK9Q8NBP7 692 aaKnown RBP4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 CTCFLQ8NI51 663 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 DENND1AQ8TEH3 1009 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 TMEM40Q8WWA1 233 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 FAM168AQ92567 244 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 GATA6Q92908 595 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 LTV1Q96GA3 475 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 RBM14Q96PK6 669 aaKnown RBP4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 SEC62Q99442 399 aaKnown RBP4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 ALG1Q9BT22 464 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 NOC4LQ9BVI4 516 aaKnown RBP4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 SPZ1Q9BXG8 430 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 KIAA1683Q9H0B3 1180 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 PUS7LQ9H0K6 701 aaKnown RBP4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 TNKS2Q9H2K2 1166 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 RC3H2Q9HBD1 1191 aaKnown RBP4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 CD93Q9NPY3 652 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 TRMT13Q9NUP7 481 aaKnown RBP4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 UBP1Q9NZI7 540 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 CHMP5Q9NZZ3 219 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms