RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 ADAM17P78536 824 aa4.26□□□□□ -1.73
SCFD1-213ENST00000554776 TMPRSS15P98073 1019 aa4.26□□□□□ -1.73
SCFD1-213ENST00000554776 HGFACQ04756 655 aa4.26□□□□□ -1.73
SCFD1-213ENST00000554776 ADCY2Q08462 1091 aa4.26□□□□□ -1.73
SCFD1-213ENST00000554776 ICAM4Q14773 271 aa4.26□□□□□ -1.73
SCFD1-213ENST00000554776 DGKDQ16760 1214 aa4.26□□□□□ -1.73
SCFD1-213ENST00000554776 TIGD7Q6NT04 549 aaPredicted RBP4.26□□□□□ -1.73
SCFD1-213ENST00000554776 UNQ6494/PRO21346Q6UXR6 183 aa4.26□□□□□ -1.73
SCFD1-213ENST00000554776 HDGFL2Q7Z4V5 671 aaPredicted RBP4.26□□□□□ -1.73
SCFD1-213ENST00000554776 BMP8AQ7Z5Y6 402 aa4.26□□□□□ -1.73
SCFD1-213ENST00000554776 CXorf67Q86X51 503 aaPredicted RBP4.26□□□□□ -1.73
SCFD1-213ENST00000554776 SPATS2Q86XZ4 545 aaKnown RBP4.26□□□□□ -1.73
SCFD1-213ENST00000554776 RAVER1Q8IY67 606 aaKnown RBP4.26□□□□□ -1.73
SCFD1-213ENST00000554776 WDR66Q8TBY9 1149 aa4.26□□□□□ -1.73
SCFD1-213ENST00000554776 COG1Q8WTW3 980 aa4.26□□□□□ -1.73
SCFD1-213ENST00000554776 RPGRQ92834 1020 aaKnown RBP4.26□□□□□ -1.73
SCFD1-213ENST00000554776 NKD2Q969F2 451 aaPredicted RBP4.26□□□□□ -1.73
SCFD1-213ENST00000554776 GNRHR2Q96P88 292 aa4.26□□□□□ -1.73
SCFD1-213ENST00000554776 LRRC37BQ96QE4 947 aa4.26□□□□□ -1.73
SCFD1-213ENST00000554776 C1QTNF3Q9BXJ4 246 aa4.26□□□□□ -1.73
SCFD1-213ENST00000554776 KRTAP9-3Q9BYQ3 159 aa4.26□□□□□ -1.73
SCFD1-213ENST00000554776 CCDC8Q9H0W5 538 aaPredicted RBP4.26□□□□□ -1.73
SCFD1-213ENST00000554776 MSL2Q9HCI7 577 aa4.26□□□□□ -1.73
SCFD1-213ENST00000554776 SAE1Q9UBE0 346 aaPredicted RBP4.26□□□□□ -1.73
SCFD1-213ENST00000554776 MCM8Q9UJA3 840 aa4.26□□□□□ -1.73
SCFD1-213ENST00000554776 DENND2AQ9ULE3 1009 aa4.26□□□□□ -1.73
SCFD1-213ENST00000554776 OAZ3Q9UMX2 235 aa4.26□□□□□ -1.73
SCFD1-213ENST00000554776 CTDP1Q9Y5B0 961 aaPredicted RBP4.26□□□□□ -1.73
SCFD1-213ENST00000554776 PHLDB1Q86UU1 1377 aa4.26□□□□□ -1.73
SCFD1-213ENST00000554776 WASHC2CQ9Y4E1 1318 aa4.25□□□□□ -1.73
SCFD1-213ENST00000554776 OPHN1O60890 802 aa4.25□□□□□ -1.73
SCFD1-213ENST00000554776 PRKD3O94806 890 aa4.25□□□□□ -1.73
SCFD1-213ENST00000554776 S100BP04271 92 aaPredicted RBP4.25□□□□□ -1.73
SCFD1-213ENST00000554776 ADRB1P08588 477 aa4.25□□□□□ -1.73
SCFD1-213ENST00000554776 CR2P20023 1033 aa4.25□□□□□ -1.73
SCFD1-213ENST00000554776 MANFP55145 182 aaKnown RBP4.25□□□□□ -1.73
SCFD1-213ENST00000554776 SESN2P58004 480 aaPredicted RBP4.25□□□□□ -1.73
SCFD1-213ENST00000554776 DUSP8Q13202 625 aa4.25□□□□□ -1.73
SCFD1-213ENST00000554776 PDCD1Q15116 288 aa4.25□□□□□ -1.73
SCFD1-213ENST00000554776 RNF219Q5W0B1 726 aaPredicted RBP4.25□□□□□ -1.73
SCFD1-213ENST00000554776 TCTN3Q6NUS6 607 aa4.25□□□□□ -1.73
SCFD1-213ENST00000554776 KLHDC10Q6PID8 442 aa4.25□□□□□ -1.73
SCFD1-213ENST00000554776 FRMD7Q6ZUT3 714 aa4.25□□□□□ -1.73
SCFD1-213ENST00000554776 ESPNLQ6ZVH7 1005 aa4.25□□□□□ -1.73
SCFD1-213ENST00000554776 TAX1BP1Q86VP1 789 aa4.25□□□□□ -1.73
SCFD1-213ENST00000554776 C8orf49Q96NF6 230 aa4.25□□□□□ -1.73
SCFD1-213ENST00000554776 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
SCFD1-213ENST00000554776 MTG2Q9H4K7 406 aa4.25□□□□□ -1.73
SCFD1-213ENST00000554776 VTA1Q9NP79 307 aa4.25□□□□□ -1.73
SCFD1-213ENST00000554776 TOPORSQ9NS56 1045 aaPredicted RBP4.25□□□□□ -1.73
SCFD1-213ENST00000554776 PUF60Q9UHX1 559 aaKnown RBP4.25□□□□□ -1.73
SCFD1-213ENST00000554776 ST6GALNAC2Q9UJ37 374 aa4.25□□□□□ -1.73
SCFD1-213ENST00000554776 MAGEL2Q9UJ55 1249 aa4.25□□□□□ -1.73
SCFD1-213ENST00000554776 PPP2R3BQ9Y5P8 575 aa4.25□□□□□ -1.73
SCFD1-213ENST00000554776 A0A0A6YYJ9 748 aa4.24□□□□□ -1.73
SCFD1-213ENST00000554776 PMS2P1A4D2B8 440 aa4.24□□□□□ -1.73
SCFD1-213ENST00000554776 K7ESF4 209 aa4.24□□□□□ -1.73
SCFD1-213ENST00000554776 FOXS1O43638 330 aa4.24□□□□□ -1.73
SCFD1-213ENST00000554776 H2AFYO75367 372 aaKnown RBP4.24□□□□□ -1.73
SCFD1-213ENST00000554776 APOL3O95236 402 aa4.24□□□□□ -1.73
SCFD1-213ENST00000554776 PARNO95453 639 aaKnown RBP4.24□□□□□ -1.73
SCFD1-213ENST00000554776 PFKMP08237 780 aa4.24□□□□□ -1.73
SCFD1-213ENST00000554776 ZNF20P17024 532 aa4.24□□□□□ -1.73
SCFD1-213ENST00000554776 ADAM15Q13444 863 aa4.24□□□□□ -1.73
SCFD1-213ENST00000554776 NECAB2Q7Z6G3 386 aa4.24□□□□□ -1.73
SCFD1-213ENST00000554776 CHST13Q8NET6 341 aa4.24□□□□□ -1.73
SCFD1-213ENST00000554776 OR14K1Q8NGZ2 314 aa4.24□□□□□ -1.73
SCFD1-213ENST00000554776 Q8TCH9 128 aa4.24□□□□□ -1.73
SCFD1-213ENST00000554776 JDP2Q8WYK2 163 aa4.24□□□□□ -1.73
SCFD1-213ENST00000554776 LPPQ93052 612 aa4.24□□□□□ -1.73
SCFD1-213ENST00000554776 GFM2Q969S9 779 aaKnown RBP4.24□□□□□ -1.73
SCFD1-213ENST00000554776 FERMT2Q96AC1 680 aa4.24□□□□□ -1.73
SCFD1-213ENST00000554776 DYDC2Q96IM9 177 aa4.24□□□□□ -1.73
SCFD1-213ENST00000554776 WWC2-AS2Q96NR7 200 aa4.24□□□□□ -1.73
SCFD1-213ENST00000554776 SMAD5Q99717 465 aaKnown RBP4.24□□□□□ -1.73
SCFD1-213ENST00000554776 DPYSL5Q9BPU6 564 aa4.24□□□□□ -1.73
SCFD1-213ENST00000554776 TRIM8Q9BZR9 551 aa4.24□□□□□ -1.73
SCFD1-213ENST00000554776 POLR3BQ9NW08 1133 aaPredicted RBP4.24□□□□□ -1.73
SCFD1-213ENST00000554776 SLC5A4Q9NY91 659 aa4.24□□□□□ -1.73
SCFD1-213ENST00000554776 TMPRSS11EQ9UL52 423 aa4.24□□□□□ -1.73
SCFD1-213ENST00000554776 FAM184BQ9ULE4 1060 aa4.24□□□□□ -1.73
SCFD1-213ENST00000554776 ZFR2Q9UPR6 939 aaKnown RBP4.24□□□□□ -1.73
SCFD1-213ENST00000554776 A0A0A6YYK5 440 aaPredicted RBP4.23□□□□□ -1.73
SCFD1-213ENST00000554776 PRSS38A1L453 326 aa4.23□□□□□ -1.73
SCFD1-213ENST00000554776 MAFGO15525 162 aa4.23□□□□□ -1.73
SCFD1-213ENST00000554776 CDC14BO60729 498 aa4.23□□□□□ -1.73
SCFD1-213ENST00000554776 ZNF623O75123 536 aa4.23□□□□□ -1.73
SCFD1-213ENST00000554776 RAD17O75943 681 aa4.23□□□□□ -1.73
SCFD1-213ENST00000554776 ERVK-21P61565 698 aa4.23□□□□□ -1.73
SCFD1-213ENST00000554776 ITKQ08881 620 aa4.23□□□□□ -1.73
SCFD1-213ENST00000554776 MTMR1Q13613 665 aa4.23□□□□□ -1.73
SCFD1-213ENST00000554776 ODR4Q5SWX8 454 aa4.23□□□□□ -1.73
SCFD1-213ENST00000554776 IQSEC1Q6DN90 963 aa4.23□□□□□ -1.73
SCFD1-213ENST00000554776 LYSMD2Q8IV50 215 aa4.23□□□□□ -1.73
SCFD1-213ENST00000554776 SLC41A1Q8IVJ1 513 aa4.23□□□□□ -1.73
SCFD1-213ENST00000554776 FUKQ8N0W3 1084 aa4.23□□□□□ -1.73
SCFD1-213ENST00000554776 GIMAP8Q8ND71 665 aaPredicted RBP4.23□□□□□ -1.73
SCFD1-213ENST00000554776 DVL3Q92997 716 aaPredicted RBP4.23□□□□□ -1.73
SCFD1-213ENST00000554776 SLC7A6OSQ96CW6 309 aaPredicted RBP4.23□□□□□ -1.73
SCFD1-213ENST00000554776 MTMR8Q96EF0 704 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms