RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 MBTD1Q05BQ5 628 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 CT47A1Q5JQC4 288 aaPredicted RBP7.48□□□□□ -1.21
LINC00517-202ENST00000554257 GNASQ5JWF2 1037 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 LRRC55Q6ZSA7 311 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 TMEM40Q8WWA1 233 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 TMEM143Q96AN5 459 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 KATNAL1Q9BW62 490 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 POLR3FQ9H1D9 316 aaPredicted RBP7.48□□□□□ -1.21
LINC00517-202ENST00000554257 ZNF215Q9UL58 517 aaPredicted RBP7.48□□□□□ -1.21
LINC00517-202ENST00000554257 VWA8A3KMH1 1905 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 ARHGEF35A5YM69 484 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 SFI1A8K8P3 1242 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 CABYRO75952 493 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 CAPN2P17655 700 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 GAP43P17677 238 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 NMT1P30419 496 aaKnown RBP7.48□□□□□ -1.21
LINC00517-202ENST00000554257 GPC3P51654 580 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 LAMTOR4Q0VGL1 99 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 PPFIA1Q13136 1202 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 MBTPS1Q14703 1052 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 TCTN1Q2MV58 587 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 L1TD1Q5T7N2 865 aaKnown RBP7.48□□□□□ -1.21
LINC00517-202ENST00000554257 CDKAL1Q5VV42 579 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 PPP4R3CPQ6ZMV5 832 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 KSR1Q8IVT5 923 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 PCSK9Q8NBP7 692 aaKnown RBP7.48□□□□□ -1.21
LINC00517-202ENST00000554257 MCPH1Q8NEM0 835 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 U2AF1L4Q8WU68 220 aaKnown RBP7.48□□□□□ -1.21
LINC00517-202ENST00000554257 KIFAP3Q92845 792 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 SMARCE1Q969G3 411 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 SENP6Q9GZR1 1112 aaPredicted RBP7.48□□□□□ -1.21
LINC00517-202ENST00000554257 AZI2Q9H6S1 392 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 TMEM134Q9H6X4 195 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 NRBP2Q9NSY0 501 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 RRN3P2A6NIE6 340 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 CHRNA1P02708 482 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 ADSSP30520 456 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 NAMPTP43490 491 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 CLCN3P51790 818 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 ITGA7Q13683 1181 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 TPRNQ4KMQ1 711 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 IER5Q5VY09 327 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 MAP4K3Q8IVH8 894 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 C12orf56Q8IXR9 622 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 CRIPAKQ8N1N5 446 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 GUF1Q8N442 669 aaKnown RBP7.48□□□□□ -1.21
LINC00517-202ENST00000554257 LRRC71Q8N4P6 559 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 CDK5RAP3Q96JB5 506 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 DEFB118Q96PH6 123 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 LRRC27Q9C0I9 530 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 RBSNQ9H1K0 784 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 FZD8Q9H461 694 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 PARVGQ9HBI0 331 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 TRAF3IP3Q9Y228 551 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 PLXNA4Q9HCM2 1894 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 CHD9Q3L8U1 2897 aa7.48□□□□□ -1.21
LINC00517-202ENST00000554257 AMPD3Q01432 767 aa7.47□□□□□ -1.21
LINC00517-202ENST00000554257 RAD51AP2Q09MP3 1159 aa7.47□□□□□ -1.21
LINC00517-202ENST00000554257 ZC2HC1CQ53FD0 456 aaPredicted RBP7.47□□□□□ -1.21
LINC00517-202ENST00000554257 DPY19L2P1Q6NXN4 242 aa7.47□□□□□ -1.21
LINC00517-202ENST00000554257 EFCAB12Q6NXP0 572 aa7.47□□□□□ -1.21
LINC00517-202ENST00000554257 PRPF31Q8WWY3 499 aaKnown RBP7.47□□□□□ -1.21
LINC00517-202ENST00000554257 GLG1Q92896 1179 aa7.47□□□□□ -1.21
LINC00517-202ENST00000554257 KIFC3Q9BVG8 833 aa7.47□□□□□ -1.21
LINC00517-202ENST00000554257 PHLPP2Q6ZVD8 1323 aa7.47□□□□□ -1.21
LINC00517-202ENST00000554257 ARVCFO00192 962 aa7.47□□□□□ -1.21
LINC00517-202ENST00000554257 ADRB2P07550 413 aa7.47□□□□□ -1.21
LINC00517-202ENST00000554257 CNGA1P29973 690 aa7.47□□□□□ -1.21
LINC00517-202ENST00000554257 PTENP60484 403 aa7.47□□□□□ -1.21
LINC00517-202ENST00000554257 ASIC1P78348 528 aa7.47□□□□□ -1.21
LINC00517-202ENST00000554257 ZRSR1Q15695 479 aaKnown RBP7.47□□□□□ -1.21
LINC00517-202ENST00000554257 STX1AQ16623 288 aa7.47□□□□□ -1.21
LINC00517-202ENST00000554257 RNF180Q86T96 592 aa7.47□□□□□ -1.21
LINC00517-202ENST00000554257 ZSWIM2Q8NEG5 633 aa7.47□□□□□ -1.21
LINC00517-202ENST00000554257 HVCN1Q96D96 273 aa7.47□□□□□ -1.21
LINC00517-202ENST00000554257 DRC1Q96MC2 740 aa7.47□□□□□ -1.21
LINC00517-202ENST00000554257 SLC39A2Q9NP94 309 aa7.47□□□□□ -1.21
LINC00517-202ENST00000554257 C17orf102A2RUQ5 167 aa7.47□□□□□ -1.21
LINC00517-202ENST00000554257 MAGEB2O15479 319 aa7.47□□□□□ -1.21
LINC00517-202ENST00000554257 ANO6Q4KMQ2 910 aa7.47□□□□□ -1.21
LINC00517-202ENST00000554257 SLC39A5Q6ZMH5 540 aa7.47□□□□□ -1.21
LINC00517-202ENST00000554257 FBXL18Q96ME1 805 aa7.47□□□□□ -1.21
LINC00517-202ENST00000554257 SEZ6LQ9BYH1 1024 aa7.47□□□□□ -1.21
LINC00517-202ENST00000554257 CBX8Q9HC52 389 aa7.47□□□□□ -1.21
LINC00517-202ENST00000554257 TRMT13Q9NUP7 481 aaKnown RBP7.47□□□□□ -1.21
LINC00517-202ENST00000554257 RWDD2AQ9UIY3 292 aa7.47□□□□□ -1.21
LINC00517-202ENST00000554257 COL4A3BPQ9Y5P4 624 aa7.47□□□□□ -1.21
LINC00517-202ENST00000554257 COL4A4P53420 1690 aaPredicted RBP7.47□□□□□ -1.21
LINC00517-202ENST00000554257 A0A0U1RQG5 324 aaPredicted RBP7.46□□□□□ -1.21
LINC00517-202ENST00000554257 TRIM49BA6NDI0 452 aa7.46□□□□□ -1.21
LINC00517-202ENST00000554257 BIN1O00499 593 aa7.46□□□□□ -1.21
LINC00517-202ENST00000554257 HOXA11P31270 313 aaPredicted RBP7.46□□□□□ -1.21
LINC00517-202ENST00000554257 MARSP56192 900 aaKnown RBP7.46□□□□□ -1.21
LINC00517-202ENST00000554257 FAAP100Q0VG06 881 aa7.46□□□□□ -1.21
LINC00517-202ENST00000554257 PTK7Q13308 1070 aa7.46□□□□□ -1.21
LINC00517-202ENST00000554257 FAM26FQ5R3K3 315 aa7.46□□□□□ -1.21
LINC00517-202ENST00000554257 ANKRD40Q6AI12 368 aa7.46□□□□□ -1.21
LINC00517-202ENST00000554257 MLKLQ8NB16 471 aa7.46□□□□□ -1.21
LINC00517-202ENST00000554257 SYAP1Q96A49 352 aaPredicted RBP7.46□□□□□ -1.21
LINC00517-202ENST00000554257 RNF208Q9H0X6 261 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms