RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 SLC4A10Q6U841 1118 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 LINC00114Q6XXX2 140 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 RUFY4Q6ZNE9 571 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 ILDR2Q71H61 639 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 ARMCX6Q7L4S7 300 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 TRPM8Q7Z2W7 1104 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 GALNT12Q8IXK2 581 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 LMNTD2Q8IXW0 634 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 STK11IPQ8N1F8 1099 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 CLASRPQ8N2M8 674 aaKnown RBP5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 ANKS4BQ8N8V4 417 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 LSM14AQ8ND56 463 aaKnown RBP5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 ZNF417Q8TAU3 575 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 TTC9Q92623 222 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 UTP4Q969X6 686 aaKnown RBP5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 PLD4Q96BZ4 506 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 EAF2Q96CJ1 260 aaPredicted RBP5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 GPATCH3Q96I76 525 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 ZNF333Q96JL9 665 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 TMEM237Q96Q45 408 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 ZNF587Q96SQ5 575 aaPredicted RBP5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 TMEM109Q9BVC6 243 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 PUS3Q9BZE2 481 aaKnown RBP5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 ZCWPW1Q9H0M4 648 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 RAB17Q9H0T7 212 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 ISCUQ9H1K1 167 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 TLE6Q9H808 572 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 RMI1Q9H9A7 625 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 RNPEPL1Q9HAU8 725 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 TMEM165Q9HC07 324 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 PPANQ9NQ55 473 aaKnown RBP5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 DDX21Q9NR30 783 aaKnown RBP eCLIP5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 ENAMQ9NRM1 1142 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 DZANK1Q9NVP4 752 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 DDX43Q9NXZ2 648 aaKnown RBP5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 KIAA1522Q9P206 1035 aaPredicted RBP5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 PRKAG3Q9UGI9 489 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 SWAP70Q9UH65 585 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 FBXO2Q9UK22 296 aaPredicted RBP5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 G3BP2Q9UN86 482 aaKnown RBP5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 BZW2Q9Y6E2 419 aaKnown RBP5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 ARHGAP23Q9P227 1491 aa5.77□□□□□ -1.49
LSM3P2-201ENST00000551246 ZNF609O15014 1411 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 CES2O00748 559 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 ZNF263O14978 683 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 WDR46O15213 610 aaKnown RBP5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 BIRC5O15392 142 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 KRT16P08779 473 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 CLTAP09496 248 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 PARP1P09874 1014 aaKnown RBP5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 ZBTB48P10074 688 aaPredicted RBP5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 NID1P14543 1247 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 TMOD1P28289 359 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 HSD17B3P37058 310 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 MSH2P43246 934 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 MMP13P45452 471 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 PLCB3Q01970 1234 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 SPAG1Q07617 926 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 CCDC15Q0P6D6 951 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 BCL2A1Q16548 175 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 FIGNQ5HY92 759 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 WASHC2DQ5SRD0 308 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 CCDC129Q6ZRS4 1044 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 FBXO33Q7Z6M2 555 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 TBC1D1Q86TI0 1168 aaPredicted RBP5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 IRF2BP1Q8IU81 584 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 SYCP3Q8IZU3 236 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 SMC1BQ8NDV3 1235 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 NEDD1Q8NHV4 660 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 NUDT8Q8WV74 236 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 RMDN2Q96LZ7 410 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 HHIPQ96QV1 700 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 RPS6KC1Q96S38 1066 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 RUFY1Q96T51 708 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 ARPC5LQ9BPX5 153 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 CORO1BQ9BR76 489 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 FAM167BQ9BTA0 163 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 MTA3Q9BTC8 594 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 DSCC1Q9BVC3 393 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 TLR10Q9BXR5 811 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 SMG9Q9H0W8 520 aaKnown RBP5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 EPB41L1Q9H4G0 881 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 FAM114A2Q9NRY5 505 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 STK32BQ9NY57 414 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 UTP6Q9NYH9 597 aaKnown RBP5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 PDP2Q9P2J9 529 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 NKX1-2Q9UD57 310 aaPredicted RBP5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 ITGB1BP2Q9UKP3 347 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 SYNPO2Q9UMS6 1093 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 GUCA1BQ9UMX6 200 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 PLAAQ9Y263 795 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 HYOU1Q9Y4L1 999 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 CTDP1Q9Y5B0 961 aaPredicted RBP5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 NR2E3Q9Y5X4 410 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 COMMD3-BMI1R4GMX3 469 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 DDX60Q8IY21 1712 aaKnown RBP5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 C1orf167Q5SNV9 1468 aa5.76□□□□□ -1.49
LSM3P2-201ENST00000551246 STK36Q9NRP7 1315 aa5.75□□□□□ -1.49
LSM3P2-201ENST00000551246 CACNA1FO60840 1977 aa5.75□□□□□ -1.49
LSM3P2-201ENST00000551246 PNMA6FA0A0J9YX94 578 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms