RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 METTL13Q8N6R0 699 aa13.38□□□□□ -0.27
GABPB1-206ENST00000543881 LINC01465Q8N7H1 131 aa13.38□□□□□ -0.27
GABPB1-206ENST00000543881 CASP10Q92851 521 aa13.38□□□□□ -0.27
GABPB1-206ENST00000543881 RIT2Q99578 217 aa13.38□□□□□ -0.27
GABPB1-206ENST00000543881 OSMRQ99650 979 aa13.38□□□□□ -0.27
GABPB1-206ENST00000543881 ADAM7Q9H2U9 754 aa13.38□□□□□ -0.27
GABPB1-206ENST00000543881 UNC45AQ9H3U1 944 aa13.38□□□□□ -0.27
GABPB1-206ENST00000543881 ELAC1Q9H777 363 aaKnown RBP13.38□□□□□ -0.27
GABPB1-206ENST00000543881 CYP3A7-CYP3A51PA0A087WV96 503 aa13.37□□□□□ -0.27
GABPB1-206ENST00000543881 CHMP2AO43633 222 aa13.37□□□□□ -0.27
GABPB1-206ENST00000543881 GAS7O60861 476 aa13.37□□□□□ -0.27
GABPB1-206ENST00000543881 PSMD10O75832 226 aa13.37□□□□□ -0.27
GABPB1-206ENST00000543881 NEFLP07196 543 aa13.37□□□□□ -0.27
GABPB1-206ENST00000543881 CYP3A7P24462 503 aa13.37□□□□□ -0.27
GABPB1-206ENST00000543881 PBX3P40426 434 aa13.37□□□□□ -0.27
GABPB1-206ENST00000543881 CRYBB1P53674 252 aaPredicted RBP13.37□□□□□ -0.27
GABPB1-206ENST00000543881 FAM189BP81408 668 aa13.37□□□□□ -0.27
GABPB1-206ENST00000543881 KRT17Q04695 432 aa13.37□□□□□ -0.27
GABPB1-206ENST00000543881 ITIH3Q06033 890 aa13.37□□□□□ -0.27
GABPB1-206ENST00000543881 Q4G0T1 1027 aa13.37□□□□□ -0.27
GABPB1-206ENST00000543881 RIF1Q5UIP0 2472 aaKnown RBP13.37□□□□□ -0.27
GABPB1-206ENST00000543881 LRCH2Q5VUJ6 765 aa13.37□□□□□ -0.27
GABPB1-206ENST00000543881 CES5AQ6NT32 575 aa13.37□□□□□ -0.27
GABPB1-206ENST00000543881 KCNT2Q6UVM3 1135 aa13.37□□□□□ -0.27
GABPB1-206ENST00000543881 B3GNT9Q6UX72 402 aa13.37□□□□□ -0.27
GABPB1-206ENST00000543881 LRRC55Q6ZSA7 311 aa13.37□□□□□ -0.27
GABPB1-206ENST00000543881 TMC7Q7Z402 723 aa13.37□□□□□ -0.27
GABPB1-206ENST00000543881 FAM228AQ86W67 206 aa13.37□□□□□ -0.27
GABPB1-206ENST00000543881 DAGLBQ8NCG7 672 aa13.37□□□□□ -0.27
GABPB1-206ENST00000543881 NECTIN4Q96NY8 510 aa13.37□□□□□ -0.27
GABPB1-206ENST00000543881 TMEM117Q9H0C3 514 aa13.37□□□□□ -0.27
GABPB1-206ENST00000543881 SMOC2Q9H3U7 446 aa13.37□□□□□ -0.27
GABPB1-206ENST00000543881 GJB4Q9NTQ9 266 aa13.37□□□□□ -0.27
GABPB1-206ENST00000543881 TCEAL9Q9UHQ7 104 aa13.37□□□□□ -0.27
GABPB1-206ENST00000543881 TPCN1Q9ULQ1 816 aa13.37□□□□□ -0.27
GABPB1-206ENST00000543881 KCNJ14Q9UNX9 436 aa13.37□□□□□ -0.27
GABPB1-206ENST00000543881 HCFC2Q9Y5Z7 792 aa13.37□□□□□ -0.27
GABPB1-206ENST00000543881 FAM186AA6NE01 2351 aa13.37□□□□□ -0.27
GABPB1-206ENST00000543881 OATP04181 439 aa13.36□□□□□ -0.27
GABPB1-206ENST00000543881 PPM1AP35813 382 aa13.36□□□□□ -0.27
GABPB1-206ENST00000543881 PRKCEQ02156 737 aa13.36□□□□□ -0.27
GABPB1-206ENST00000543881 ASTLQ6HA08 431 aaPredicted RBP13.36□□□□□ -0.27
GABPB1-206ENST00000543881 EFCAB12Q6NXP0 572 aa13.36□□□□□ -0.27
GABPB1-206ENST00000543881 FRMD5Q7Z6J6 570 aa13.36□□□□□ -0.27
GABPB1-206ENST00000543881 LRRC71Q8N4P6 559 aa13.36□□□□□ -0.27
GABPB1-206ENST00000543881 FAM167AQ96KS9 214 aa13.36□□□□□ -0.27
GABPB1-206ENST00000543881 MBOAT7Q96N66 472 aa13.36□□□□□ -0.27
GABPB1-206ENST00000543881 ZNF558Q96NG5 402 aa13.36□□□□□ -0.27
GABPB1-206ENST00000543881 CASD1Q96PB1 797 aa13.36□□□□□ -0.27
GABPB1-206ENST00000543881 TEKT3Q9BXF9 490 aa13.36□□□□□ -0.27
GABPB1-206ENST00000543881 ADAMTS10Q9H324 1103 aa13.36□□□□□ -0.27
GABPB1-206ENST00000543881 CEP131Q9UPN4 1083 aa13.36□□□□□ -0.27
GABPB1-206ENST00000543881 MAGEB2O15479 319 aa13.36□□□□□ -0.27
GABPB1-206ENST00000543881 STBD1O95210 358 aa13.36□□□□□ -0.27
GABPB1-206ENST00000543881 CTDNEP1O95476 244 aa13.36□□□□□ -0.27
GABPB1-206ENST00000543881 NLRP11P59045 1033 aaKnown RBP13.36□□□□□ -0.27
GABPB1-206ENST00000543881 DSC3Q14574 896 aa13.36□□□□□ -0.27
GABPB1-206ENST00000543881 SMC1AQ14683 1233 aaKnown RBP13.36□□□□□ -0.27
GABPB1-206ENST00000543881 ERMP1Q7Z2K6 904 aa13.36□□□□□ -0.27
GABPB1-206ENST00000543881 MRPL43Q8N983 215 aaKnown RBP13.36□□□□□ -0.27
GABPB1-206ENST00000543881 ETNPPLQ8TBG4 499 aa13.36□□□□□ -0.27
GABPB1-206ENST00000543881 NKD2Q969F2 451 aaPredicted RBP13.36□□□□□ -0.27
GABPB1-206ENST00000543881 ZNF668Q96K58 619 aaPredicted RBP13.36□□□□□ -0.27
GABPB1-206ENST00000543881 PHF20Q9BVI0 1012 aa13.36□□□□□ -0.27
GABPB1-206ENST00000543881 C22orf23Q9BZE7 217 aa13.36□□□□□ -0.27
GABPB1-206ENST00000543881 MFSD1Q9H3U5 465 aa13.36□□□□□ -0.27
GABPB1-206ENST00000543881 RNF19AQ9NV58 838 aa13.36□□□□□ -0.27
GABPB1-206ENST00000543881 PPP4R2Q9NY27 417 aa13.36□□□□□ -0.27
GABPB1-206ENST00000543881 SPG21Q9NZD8 308 aa13.36□□□□□ -0.27
GABPB1-206ENST00000543881 VPS13AQ96RL7 3174 aa13.35□□□□□ -0.27
GABPB1-206ENST00000543881 TMEM150BA6NC51 233 aa13.35□□□□□ -0.27
GABPB1-206ENST00000543881 C2orf71A6NGG8 1288 aa13.35□□□□□ -0.27
GABPB1-206ENST00000543881 HOXA2O43364 376 aa13.35□□□□□ -0.27
GABPB1-206ENST00000543881 SLC37A4O43826 429 aa13.35□□□□□ -0.27
GABPB1-206ENST00000543881 PFKFB2O60825 505 aa13.35□□□□□ -0.27
GABPB1-206ENST00000543881 ASGR2P07307 311 aa13.35□□□□□ -0.27
GABPB1-206ENST00000543881 WEE2P0C1S8 567 aa13.35□□□□□ -0.27
GABPB1-206ENST00000543881 SFNP31947 248 aa13.35□□□□□ -0.27
GABPB1-206ENST00000543881 MTHFRP42898 656 aa13.35□□□□□ -0.27
GABPB1-206ENST00000543881 ID4P47928 161 aa13.35□□□□□ -0.27
GABPB1-206ENST00000543881 JAK3P52333 1124 aa13.35□□□□□ -0.27
GABPB1-206ENST00000543881 TARBP2Q15633 366 aaKnown RBP13.35□□□□□ -0.27
GABPB1-206ENST00000543881 INF2Q27J81 1249 aa13.35□□□□□ -0.27
GABPB1-206ENST00000543881 GALNT17Q6IS24 598 aa13.35□□□□□ -0.27
GABPB1-206ENST00000543881 CPLX2Q6PUV4 134 aaKnown RBP13.35□□□□□ -0.27
GABPB1-206ENST00000543881 MIER3Q7Z3K6 550 aa13.35□□□□□ -0.27
GABPB1-206ENST00000543881 ABI1Q8IZP0 508 aa13.35□□□□□ -0.27
GABPB1-206ENST00000543881 LRRC43Q8N309 656 aa13.35□□□□□ -0.27
GABPB1-206ENST00000543881 CEP89Q96ST8 783 aa13.35□□□□□ -0.27
GABPB1-206ENST00000543881 NRBP2Q9NSY0 501 aa13.35□□□□□ -0.27
GABPB1-206ENST00000543881 AKT3Q9Y243 479 aa13.35□□□□□ -0.27
GABPB1-206ENST00000543881 CLASP2O75122 1294 aaKnown RBP13.34□□□□□ -0.27
GABPB1-206ENST00000543881 CA8P35219 290 aa13.34□□□□□ -0.27
GABPB1-206ENST00000543881 CLCN5P51795 746 aa13.34□□□□□ -0.27
GABPB1-206ENST00000543881 AK2P54819 239 aa13.34□□□□□ -0.27
GABPB1-206ENST00000543881 DRP2Q13474 957 aa13.34□□□□□ -0.27
GABPB1-206ENST00000543881 NONOQ15233 471 aaKnown RBP eCLIP13.34□□□□□ -0.276e-6■□□□□ 10
GABPB1-206ENST00000543881 MOXD1Q6UVY6 613 aa13.34□□□□□ -0.27
GABPB1-206ENST00000543881 ZDHHC14Q8IZN3 488 aa13.34□□□□□ -0.27
GABPB1-206ENST00000543881 FAM177A1Q8N128 213 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms