RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 IP6K2Q9UHH9 426 aa8.36□□□□□ -1.07
VPS13D-211ENST00000543710 PDS5AQ29RF7 1337 aaKnown RBP8.35□□□□□ -1.07
VPS13D-211ENST00000543710 SPECC1L-ADORA2AF8WAN1 911 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 MYO1FO00160 1098 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 OPHN1O60890 802 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 KRT1P04264 644 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 TECP42680 631 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 ARL4CP56559 192 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 CHRNDQ07001 517 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 GRM4Q14833 912 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 STXBP2Q15833 593 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 CSGALNACT1Q8TDX6 532 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 RAD54LQ92698 747 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 THOC1Q96FV9 657 aaKnown RBP8.35□□□□□ -1.07
VPS13D-211ENST00000543710 SCYL1Q96KG9 808 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 FAM20AQ96MK3 541 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 KLC2Q9H0B6 622 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 UPF3AQ9H1J1 476 aaKnown RBP8.35□□□□□ -1.07
VPS13D-211ENST00000543710 STN1Q9H668 368 aaKnown RBP8.35□□□□□ -1.07
VPS13D-211ENST00000543710 PDE11AQ9HCR9 933 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 FANCLQ9NW38 375 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 HERC5Q9UII4 1024 aaKnown RBP8.35□□□□□ -1.07
VPS13D-211ENST00000543710 KCNJ14Q9UNX9 436 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 USTQ9Y2C2 406 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 ADGRB2O60241 1585 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 SPATA31D1Q6ZQQ2 1576 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 JAK2O60674 1132 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 SPAG6O75602 509 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 MOCS3O95396 460 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 CASP14P31944 242 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 HSPA13P48723 471 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 PPP2R5CQ13362 524 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 XKR9Q5GH70 373 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 ZC3H14Q6PJT7 736 aaKnown RBP8.35□□□□□ -1.07
VPS13D-211ENST00000543710 APOA5Q6Q788 366 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 ARMCX2Q7L311 632 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 DYMQ7RTS9 669 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 FRMD5Q7Z6J6 570 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 CDKL3Q8IVW4 592 aaPredicted RBP8.35□□□□□ -1.07
VPS13D-211ENST00000543710 SLC35F6Q8N357 371 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 TNIP2Q8NFZ5 429 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 TCEANC2Q96MN5 208 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 TSSK1BQ9BXA7 367 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 NCOA5Q9HCD5 579 aaKnown RBP8.35□□□□□ -1.07
VPS13D-211ENST00000543710 MYOZ2Q9NPC6 264 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 DISC1Q9NRI5 854 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 ASNSD1Q9NWL6 643 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 THG1LQ9NWX6 298 aaKnown RBP8.35□□□□□ -1.07
VPS13D-211ENST00000543710 PCDHB7Q9Y5E2 793 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 PCDHB4Q9Y5E5 795 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 MORC2Q9Y6X9 1032 aaPredicted RBP8.35□□□□□ -1.07
VPS13D-211ENST00000543710 KIF1AQ12756 1690 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 KDM6AO15550 1401 aaPredicted RBP8.35□□□□□ -1.07
VPS13D-211ENST00000543710 CNTNAP4Q9C0A0 1308 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 PRMT3O60678 531 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 ZNF18P17022 549 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 MMEL1Q495T6 779 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 MMS22LQ6ZRQ5 1243 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 COL23A1Q86Y22 540 aaPredicted RBP8.35□□□□□ -1.07
VPS13D-211ENST00000543710 EMILIN2Q9BXX0 1053 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 FAM207AQ9NSI2 230 aaPredicted RBP8.35□□□□□ -1.07
VPS13D-211ENST00000543710 ANKRD26Q9UPS8 1709 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 CPDO75976 1380 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 ANXA1P04083 346 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 GPSM2P81274 684 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 CYP4A11Q02928 519 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 GNASQ5JWF2 1037 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 IL31Q6EBC2 164 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 ZNF577Q9BSK1 485 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 FRMD8Q9BZ67 464 aaPredicted RBP8.35□□□□□ -1.07
VPS13D-211ENST00000543710 SUGCTQ9HAC7 445 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 PARVGQ9HBI0 331 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 TUFT1Q9NNX1 390 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 INTUQ9ULD6 942 aa8.35□□□□□ -1.07
VPS13D-211ENST00000543710 MT-ND3P03897 115 aa8.34□□□□□ -1.07
VPS13D-211ENST00000543710 PAPOLAP51003 745 aaKnown RBP8.34□□□□□ -1.07
VPS13D-211ENST00000543710 MDM2Q00987 491 aaPredicted RBP8.34□□□□□ -1.07
VPS13D-211ENST00000543710 PPP4R4Q6NUP7 873 aa8.34□□□□□ -1.07
VPS13D-211ENST00000543710 C12orf50Q8NA57 414 aaPredicted RBP8.34□□□□□ -1.07
VPS13D-211ENST00000543710 FBXO22Q8NEZ5 403 aa8.34□□□□□ -1.07
VPS13D-211ENST00000543710 DEPDC1BQ8WUY9 529 aa8.34□□□□□ -1.07
VPS13D-211ENST00000543710 POP1Q99575 1024 aaKnown RBP8.34□□□□□ -1.07
VPS13D-211ENST00000543710 ZBTB18Q99592 522 aa8.34□□□□□ -1.07
VPS13D-211ENST00000543710 MAGEB5Q9BZ81 275 aa8.34□□□□□ -1.07
VPS13D-211ENST00000543710 KMT5AQ9NQR1 393 aa8.34□□□□□ -1.07
VPS13D-211ENST00000543710 PPME1Q9Y570 386 aa8.34□□□□□ -1.07
VPS13D-211ENST00000543710 PPLO60437 1756 aa8.34□□□□□ -1.07
VPS13D-211ENST00000543710 GOLGA8IPA6NC78 632 aa8.34□□□□□ -1.07
VPS13D-211ENST00000543710 GSTA4O15217 222 aa8.34□□□□□ -1.07
VPS13D-211ENST00000543710 CCDC22O60826 627 aa8.34□□□□□ -1.07
VPS13D-211ENST00000543710 CYBBP04839 570 aa8.34□□□□□ -1.07
VPS13D-211ENST00000543710 INPP1P49441 399 aa8.34□□□□□ -1.07
VPS13D-211ENST00000543710 NDUFV1P49821 464 aa8.34□□□□□ -1.07
VPS13D-211ENST00000543710 MED21Q13503 144 aa8.34□□□□□ -1.07
VPS13D-211ENST00000543710 THOC5Q13769 683 aaKnown RBP8.34□□□□□ -1.07
VPS13D-211ENST00000543710 NECTIN1Q15223 517 aa8.34□□□□□ -1.07
VPS13D-211ENST00000543710 INAVAQ3KP66 663 aa8.34□□□□□ -1.07
VPS13D-211ENST00000543710 TAF1BQ53T94 588 aaPredicted RBP8.34□□□□□ -1.07
VPS13D-211ENST00000543710 CASC4Q6P4E1 433 aa8.34□□□□□ -1.07
VPS13D-211ENST00000543710 CRLF3Q8IUI8 442 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms