RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 KCNK3O14649 394 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 PDHA1P08559 390 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 PCP11498 1178 aaKnown RBP5.65□□□□□ -1.51
PROM1-220ENST00000540805 ECHS1P30084 290 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 RNASELQ05823 741 aaKnown RBP5.65□□□□□ -1.51
PROM1-220ENST00000540805 LAMB3Q13751 1172 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 HERC4Q5GLZ8 1057 aaPredicted RBP5.65□□□□□ -1.51
PROM1-220ENST00000540805 HGSNATQ68CP4 663 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 CENPPQ6IPU0 288 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 DPP9Q86TI2 863 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 KIAA0895Q8NCT3 520 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 B4GALNT2Q8NHY0 566 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 LRRC15Q8TF66 581 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 GPKOWQ92917 476 aaPredicted RBP eCLIP5.65□□□□□ -1.51
PROM1-220ENST00000540805 PBKQ96KB5 322 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 AK8Q96MA6 479 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 XPO6Q96QU8 1125 aaKnown RBP5.65□□□□□ -1.51
PROM1-220ENST00000540805 CEP72Q9P209 647 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 TMEM59LQ9UK28 342 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 MYH7BA7E2Y1 1941 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 hCG_2014768A0A024R1R8 64 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 ARHGEF35A5YM69 484 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 M0R2N6 131 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 CEP104O60308 925 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 ATXN8OSP0DMR3 200 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 PRPHP41219 470 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 PPP4CP60510 307 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 ICA1Q05084 483 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 INF2Q27J81 1249 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 FAM133BQ5BKY9 247 aaKnown RBP5.65□□□□□ -1.51
PROM1-220ENST00000540805 DALRD3Q5D0E6 543 aaKnown RBP5.65□□□□□ -1.51
PROM1-220ENST00000540805 PPP1R15BQ5SWA1 713 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 MFSD4BQ5TF39 518 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 CRELD2Q6UXH1 353 aaPredicted RBP5.65□□□□□ -1.51
PROM1-220ENST00000540805 DDX42Q86XP3 938 aaKnown RBP eCLIP5.65□□□□□ -1.51
PROM1-220ENST00000540805 TPH2Q8IWU9 490 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 KIF2BQ8N4N8 673 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 TTLL6Q8N841 843 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 SH3RF3Q8TEJ3 882 aaPredicted RBP5.65□□□□□ -1.51
PROM1-220ENST00000540805 AGAP11Q8TF27 550 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 DYDC1Q8WWB3 177 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 FNBP1Q96RU3 617 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 MTFR1LQ9H019 292 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 SH3GLB2Q9NR46 395 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.65□□□□□ -1.51
PROM1-220ENST00000540805 TRIM33Q9UPN9 1127 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 GAKO14976 1311 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 FLT1P17948 1338 aa5.65□□□□□ -1.51
PROM1-220ENST00000540805 DPPA5A6NC42 116 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 CFAP73A6NFT4 308 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 CTNND1O60716 968 aaKnown RBP5.64□□□□□ -1.51
PROM1-220ENST00000540805 KRT19P08727 400 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 ATP2B4P23634 1241 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 SLMAPQ14BN4 828 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 RBBP5Q15291 538 aaKnown RBP5.64□□□□□ -1.51
PROM1-220ENST00000540805 KIAA0753Q2KHM9 967 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 NELFCDQ8IXH7 590 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 RPUSD2Q8IZ73 545 aaKnown RBP5.64□□□□□ -1.51
PROM1-220ENST00000540805 CERS5Q8N5B7 392 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 PHC3Q8NDX5 983 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 TBC1D16Q8TBP0 767 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 MDM1Q8TC05 714 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 SYN2Q92777 582 aaPredicted RBP5.64□□□□□ -1.51
PROM1-220ENST00000540805 HPS3Q969F9 1004 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 LSM14BQ9BX40 385 aaKnown RBP5.64□□□□□ -1.51
PROM1-220ENST00000540805 FAM129AQ9BZQ8 928 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 NEUROG2Q9H2A3 272 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 EBF2Q9HAK2 575 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 SPC25Q9HBM1 224 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 ATP6V0A2Q9Y487 856 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 MYH4Q9Y623 1939 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 PGRMC1O00264 195 aaKnown RBP5.64□□□□□ -1.51
PROM1-220ENST00000540805 PPEF1O14829 653 aaPredicted RBP5.64□□□□□ -1.51
PROM1-220ENST00000540805 SMNDC1O75940 238 aaKnown RBP eCLIP5.64□□□□□ -1.51
PROM1-220ENST00000540805 OR52Z1P0C646 297 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 CD19P15391 556 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 SLC16A2P36021 539 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 CYP4A11Q02928 519 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 SLC18A3Q16572 532 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 IFI16Q16666 785 aaKnown RBP5.64□□□□□ -1.51
PROM1-220ENST00000540805 C12orf60Q5U649 245 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 HHATQ5VTY9 493 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 USP37Q86T82 979 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 MYLK4Q86YV6 388 aaPredicted RBP5.64□□□□□ -1.51
PROM1-220ENST00000540805 CENPTQ96BT3 561 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 SAMD15Q9P1V8 674 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 C15orf41Q9Y2V0 281 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 GON4LQ3T8J9 2241 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 FER1L6Q2WGJ9 1857 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 F8VZ95 297 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 CCDC188H7C350 402 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 EIF3BP55884 814 aaKnown RBP5.64□□□□□ -1.51
PROM1-220ENST00000540805 KCNJ2P63252 427 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 LRRC63Q05C16 580 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 KLHL30Q0D2K2 578 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 RIPK1Q13546 671 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 ITIH4Q14624 930 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 FAM83BQ5T0W9 1011 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 ERMARDQ5T6L9 678 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 DCAF15Q66K64 600 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms