RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 LCHNA4D1U4 455 aa6.25□□□□□ -1.41
HMGB1P1-201ENST00000522557 FOXP2O15409 715 aa6.25□□□□□ -1.41
HMGB1P1-201ENST00000522557 PRC1O43663 620 aa6.25□□□□□ -1.41
HMGB1P1-201ENST00000522557 KRT37O76014 449 aa6.25□□□□□ -1.41
HMGB1P1-201ENST00000522557 MT-CO1P00395 513 aa6.25□□□□□ -1.41
HMGB1P1-201ENST00000522557 ZNF888P0CJ79 500 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P1-201ENST00000522557 POLD1P28340 1107 aa6.25□□□□□ -1.41
HMGB1P1-201ENST00000522557 EPHB4P54760 987 aa6.25□□□□□ -1.41
HMGB1P1-201ENST00000522557 ZNF174Q15697 407 aa6.25□□□□□ -1.41
HMGB1P1-201ENST00000522557 PTPN21Q16825 1174 aa6.25□□□□□ -1.41
HMGB1P1-201ENST00000522557 WDR72Q3MJ13 1102 aa6.25□□□□□ -1.41
HMGB1P1-201ENST00000522557 CXorf57Q6NSI4 855 aaKnown RBP6.25□□□□□ -1.41
HMGB1P1-201ENST00000522557 ZZZ3Q8IYH5 903 aa6.25□□□□□ -1.41
HMGB1P1-201ENST00000522557 MYO1HQ8N1T3 1032 aa6.25□□□□□ -1.41
HMGB1P1-201ENST00000522557 ZNF496Q96IT1 587 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P1-201ENST00000522557 LOXL4Q96JB6 756 aa6.25□□□□□ -1.41
HMGB1P1-201ENST00000522557 SEMA4AQ9H3S1 761 aa6.25□□□□□ -1.41
HMGB1P1-201ENST00000522557 JADE2Q9NQC1 790 aa6.25□□□□□ -1.41
HMGB1P1-201ENST00000522557 CCM2LQ9NUG4 571 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P1-201ENST00000522557 NPEPPSL1A6NEC2 478 aa6.24□□□□□ -1.41
HMGB1P1-201ENST00000522557 H2AFYO75367 372 aaKnown RBP6.24□□□□□ -1.41
HMGB1P1-201ENST00000522557 ADCY8P40145 1251 aa6.24□□□□□ -1.41
HMGB1P1-201ENST00000522557 ECE1P42892 770 aa6.24□□□□□ -1.41
HMGB1P1-201ENST00000522557 MAGEA10P43363 369 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P1-201ENST00000522557 RECQLP46063 649 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P1-201ENST00000522557 MTNR1BP49286 362 aa6.24□□□□□ -1.41
HMGB1P1-201ENST00000522557 MANFP55145 182 aaKnown RBP6.24□□□□□ -1.41
HMGB1P1-201ENST00000522557 TOP3AQ13472 1001 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P1-201ENST00000522557 CYB5RLQ6IPT4 315 aa6.24□□□□□ -1.41
HMGB1P1-201ENST00000522557 KCNK18Q7Z418 384 aa6.24□□□□□ -1.41
HMGB1P1-201ENST00000522557 RALYLQ86SE5 291 aaKnown RBP6.24□□□□□ -1.41
HMGB1P1-201ENST00000522557 HIPK4Q8NE63 616 aa6.24□□□□□ -1.41
HMGB1P1-201ENST00000522557 JPH3Q8WXH2 748 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P1-201ENST00000522557 NUP88Q99567 741 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P1-201ENST00000522557 AASDHPPTQ9NRN7 309 aa6.24□□□□□ -1.41
HMGB1P1-201ENST00000522557 SMPD4Q9NXE4 827 aa6.24□□□□□ -1.41
HMGB1P1-201ENST00000522557 ZNF180Q9UJW8 692 aa6.24□□□□□ -1.41
HMGB1P1-201ENST00000522557 TMPRSS11EQ9UL52 423 aa6.24□□□□□ -1.41
HMGB1P1-201ENST00000522557 PNMA8BQ9ULN7 279 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P1-201ENST00000522557 GOLGA6L22H0YM25 854 aa6.23□□□□□ -1.41
HMGB1P1-201ENST00000522557 GPR42O15529 346 aa6.23□□□□□ -1.41
HMGB1P1-201ENST00000522557 KDM1AO60341 852 aa6.23□□□□□ -1.41
HMGB1P1-201ENST00000522557 HIP1RO75146 1068 aa6.23□□□□□ -1.41
HMGB1P1-201ENST00000522557 CNOT4O95628 575 aaKnown RBP6.23□□□□□ -1.41
HMGB1P1-201ENST00000522557 MAP4K4O95819 1239 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P1-201ENST00000522557 ADRB1P08588 477 aa6.23□□□□□ -1.41
HMGB1P1-201ENST00000522557 MYBL2P10244 700 aa6.23□□□□□ -1.41
HMGB1P1-201ENST00000522557 ZSCAN20P17040 1043 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P1-201ENST00000522557 CD40P25942 277 aa6.23□□□□□ -1.41
HMGB1P1-201ENST00000522557 CD83Q01151 205 aa6.23□□□□□ -1.41
HMGB1P1-201ENST00000522557 USP10Q14694 798 aaKnown RBP6.23□□□□□ -1.41
HMGB1P1-201ENST00000522557 NOLC1Q14978 699 aaKnown RBP eCLIP6.23□□□□□ -1.41
HMGB1P1-201ENST00000522557 STILQ15468 1287 aa6.23□□□□□ -1.41
HMGB1P1-201ENST00000522557 ZNF827Q17R98 1081 aa6.23□□□□□ -1.41
HMGB1P1-201ENST00000522557 C14orf80Q86SX3 495 aa6.23□□□□□ -1.41
HMGB1P1-201ENST00000522557 CXorf67Q86X51 503 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P1-201ENST00000522557 SLC41A1Q8IVJ1 513 aa6.23□□□□□ -1.41
HMGB1P1-201ENST00000522557 ERCC4Q92889 916 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P1-201ENST00000522557 SAMD11Q96NU1 681 aa6.23□□□□□ -1.41
HMGB1P1-201ENST00000522557 BTBD2Q9BX70 525 aa6.23□□□□□ -1.41
HMGB1P1-201ENST00000522557 CARD11Q9BXL7 1154 aa6.23□□□□□ -1.41
HMGB1P1-201ENST00000522557 PCIF1Q9H4Z3 704 aa6.23□□□□□ -1.41
HMGB1P1-201ENST00000522557 TOMM22Q9NS69 142 aa6.23□□□□□ -1.41
HMGB1P1-201ENST00000522557 ST6GALNAC2Q9UJ37 374 aa6.23□□□□□ -1.41
HMGB1P1-201ENST00000522557 CDC42EP3Q9UKI2 254 aa6.23□□□□□ -1.41
HMGB1P1-201ENST00000522557 CFBP00751 764 aa6.22□□□□□ -1.41
HMGB1P1-201ENST00000522557 LPOP22079 712 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P1-201ENST00000522557 RRADP55042 308 aa6.22□□□□□ -1.41
HMGB1P1-201ENST00000522557 HLTFQ14527 1009 aaKnown RBP eCLIP6.22□□□□□ -1.41
HMGB1P1-201ENST00000522557 FSCN1Q16658 493 aaKnown RBP6.22□□□□□ -1.41
HMGB1P1-201ENST00000522557 ZBTB41Q5SVQ8 909 aa6.22□□□□□ -1.41
HMGB1P1-201ENST00000522557 LCE5AQ5TCM9 118 aa6.22□□□□□ -1.41
HMGB1P1-201ENST00000522557 KANK2Q63ZY3 851 aa6.22□□□□□ -1.41
HMGB1P1-201ENST00000522557 FRMD7Q6ZUT3 714 aa6.22□□□□□ -1.41
HMGB1P1-201ENST00000522557 EPM2AIP1Q7L775 607 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P1-201ENST00000522557 KANSL1Q7Z3B3 1105 aa6.22□□□□□ -1.41
HMGB1P1-201ENST00000522557 LYSMD2Q8IV50 215 aa6.22□□□□□ -1.41
HMGB1P1-201ENST00000522557 REXO1L1PQ8IX06 675 aa6.22□□□□□ -1.41
HMGB1P1-201ENST00000522557 SSH1Q8WYL5 1049 aa6.22□□□□□ -1.41
HMGB1P1-201ENST00000522557 C8orf49Q96NF6 230 aa6.22□□□□□ -1.41
HMGB1P1-201ENST00000522557 AIFM3Q96NN9 605 aa6.22□□□□□ -1.41
HMGB1P1-201ENST00000522557 ACAP3Q96P50 834 aa6.22□□□□□ -1.41
HMGB1P1-201ENST00000522557 LUC7L2Q9Y383 392 aaKnown RBP6.22□□□□□ -1.41
HMGB1P1-201ENST00000522557 ASB1Q9Y576 335 aa6.22□□□□□ -1.41
HMGB1P1-201ENST00000522557 PPP2R3BQ9Y5P8 575 aa6.22□□□□□ -1.41
HMGB1P1-201ENST00000522557 SLC4A7Q9Y6M7 1214 aa6.22□□□□□ -1.41
HMGB1P1-201ENST00000522557 WASHC2AQ641Q2 1341 aa6.22□□□□□ -1.41
HMGB1P1-201ENST00000522557 ELL2O00472 640 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P1-201ENST00000522557 PRLP01236 227 aa6.21□□□□□ -1.42
HMGB1P1-201ENST00000522557 AGXTP21549 392 aa6.21□□□□□ -1.42
HMGB1P1-201ENST00000522557 ENPP1P22413 925 aa6.21□□□□□ -1.42
HMGB1P1-201ENST00000522557 KCNQ1P51787 676 aa6.21□□□□□ -1.42
HMGB1P1-201ENST00000522557 ADAM17P78536 824 aa6.21□□□□□ -1.42
HMGB1P1-201ENST00000522557 ICAM4Q14773 271 aa6.21□□□□□ -1.42
HMGB1P1-201ENST00000522557 MLC1Q15049 377 aa6.21□□□□□ -1.42
HMGB1P1-201ENST00000522557 SLFN13Q68D06 897 aa6.21□□□□□ -1.42
HMGB1P1-201ENST00000522557 B3GNT9Q6UX72 402 aa6.21□□□□□ -1.42
HMGB1P1-201ENST00000522557 LARP4Q71RC2 724 aaKnown RBP eCLIP6.21□□□□□ -1.42
HMGB1P1-201ENST00000522557 CXXC5Q7LFL8 322 aaKnown RBP6.21□□□□□ -1.42
HMGB1P1-201ENST00000522557 GGNQ86UU5 652 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms