RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 GTF2A1P52655 376 aaPredicted RBP19.96■□□□□ 0.79
SDC2-202ENST00000518385 PAK2Q13177 524 aa19.96■□□□□ 0.79
SDC2-202ENST00000518385 PGM5Q15124 567 aa19.96■□□□□ 0.79
SDC2-202ENST00000518385 CCL15Q16663 113 aa19.96■□□□□ 0.79
SDC2-202ENST00000518385 CFAP221Q4G0U5 840 aa19.96■□□□□ 0.79
SDC2-202ENST00000518385 C1orf186Q6ZWK4 172 aa19.96■□□□□ 0.79
SDC2-202ENST00000518385 SND1Q7KZF4 910 aaKnown RBP eCLIP19.96■□□□□ 0.797e-11■■■□□ 17
SDC2-202ENST00000518385 YTHDF3Q7Z739 585 aaKnown RBP19.96■□□□□ 0.79
SDC2-202ENST00000518385 C3orf20Q8ND61 904 aa19.96■□□□□ 0.79
SDC2-202ENST00000518385 BRI3BPQ8WY22 251 aa19.96■□□□□ 0.79
SDC2-202ENST00000518385 NOX5Q96PH1 765 aa19.96■□□□□ 0.79
SDC2-202ENST00000518385 TAAR1Q96RJ0 339 aa19.96■□□□□ 0.79
SDC2-202ENST00000518385 RMDN3Q96TC7 470 aa19.96■□□□□ 0.79
SDC2-202ENST00000518385 PXMP2Q9NR77 195 aa19.96■□□□□ 0.79
SDC2-202ENST00000518385 RBPJLQ9UBG7 517 aa19.96■□□□□ 0.79
SDC2-202ENST00000518385 PNMA3Q9UL41 463 aa19.96■□□□□ 0.79
SDC2-202ENST00000518385 UBE4BO95155 1302 aa19.96■□□□□ 0.79
SDC2-202ENST00000518385 NPHP3-ACAD11A0A0J9YXS1 232 aa19.95■□□□□ 0.78
SDC2-202ENST00000518385 BTBD19C9JJ37 291 aa19.95■□□□□ 0.78
SDC2-202ENST00000518385 PDE2AO00408 941 aaPredicted RBP19.95■□□□□ 0.78
SDC2-202ENST00000518385 EIF3DO15371 548 aaKnown RBP eCLIP19.95■□□□□ 0.78
SDC2-202ENST00000518385 CALUO43852 315 aaPredicted RBP19.95■□□□□ 0.78
SDC2-202ENST00000518385 STAM2O75886 525 aa19.95■□□□□ 0.78
SDC2-202ENST00000518385 TFRCP02786 760 aaKnown RBP19.95■□□□□ 0.78
SDC2-202ENST00000518385 KIF11P52732 1056 aa19.95■□□□□ 0.78
SDC2-202ENST00000518385 MKRN3Q13064 507 aaKnown RBP19.95■□□□□ 0.78
SDC2-202ENST00000518385 MTMR1Q13613 665 aa19.95■□□□□ 0.78
SDC2-202ENST00000518385 BAATQ14032 418 aaPredicted RBP19.95■□□□□ 0.78
SDC2-202ENST00000518385 CTTNQ14247 550 aaKnown RBP19.95■□□□□ 0.78
SDC2-202ENST00000518385 NSMFQ6X4W1 530 aa19.95■□□□□ 0.78
SDC2-202ENST00000518385 SLC30A10Q6XR72 485 aa19.95■□□□□ 0.78
SDC2-202ENST00000518385 STXBP4Q6ZWJ1 553 aa19.95■□□□□ 0.78
SDC2-202ENST00000518385 MIER3Q7Z3K6 550 aa19.95■□□□□ 0.78
SDC2-202ENST00000518385 ANKRD23Q86SG2 305 aa19.95■□□□□ 0.78
SDC2-202ENST00000518385 RPAINQ86UA6 219 aa19.95■□□□□ 0.78
SDC2-202ENST00000518385 RDM1Q8NG50 284 aa19.95■□□□□ 0.78
SDC2-202ENST00000518385 PDCD2LQ9BRP1 358 aa19.95■□□□□ 0.78
SDC2-202ENST00000518385 SPATC1LQ9H0A9 340 aa19.95■□□□□ 0.78
SDC2-202ENST00000518385 SIK3Q9Y2K2 1263 aa19.95■□□□□ 0.78
SDC2-202ENST00000518385 CETN3O15182 167 aa19.95■□□□□ 0.78
SDC2-202ENST00000518385 DHX15O43143 795 aaKnown RBP19.95■□□□□ 0.78
SDC2-202ENST00000518385 CHMP2AO43633 222 aa19.95■□□□□ 0.78
SDC2-202ENST00000518385 SRGAP2O75044 1071 aa19.95■□□□□ 0.78
SDC2-202ENST00000518385 ERLIN2O94905 339 aa19.95■□□□□ 0.78
SDC2-202ENST00000518385 CCND2P30279 289 aa19.95■□□□□ 0.78
SDC2-202ENST00000518385 MRPS9P82933 396 aaKnown RBP19.95■□□□□ 0.78
SDC2-202ENST00000518385 KNOP1Q1ED39 458 aaKnown RBP19.95■□□□□ 0.78
SDC2-202ENST00000518385 ARHGEF16Q5VV41 709 aa19.95■□□□□ 0.78
SDC2-202ENST00000518385 FOXR1Q6PIV2 292 aa19.95■□□□□ 0.78
SDC2-202ENST00000518385 SAPCD2Q86UD0 394 aa19.95■□□□□ 0.78
SDC2-202ENST00000518385 PACS2Q86VP3 889 aa19.95■□□□□ 0.78
SDC2-202ENST00000518385 SMC1BQ8NDV3 1235 aa19.95■□□□□ 0.78
SDC2-202ENST00000518385 WHAMMQ8TF30 809 aa19.95■□□□□ 0.78
SDC2-202ENST00000518385 GTF3C2Q8WUA4 911 aaPredicted RBP19.95■□□□□ 0.78
SDC2-202ENST00000518385 TACO1Q9BSH4 297 aaKnown RBP19.95■□□□□ 0.78
SDC2-202ENST00000518385 FBXO40Q9UH90 709 aa19.95■□□□□ 0.78
SDC2-202ENST00000518385 DBR1Q9UK59 544 aaKnown RBP19.95■□□□□ 0.78
SDC2-202ENST00000518385 RCCD1A6NED2 376 aa19.94■□□□□ 0.78
SDC2-202ENST00000518385 PDHXO00330 501 aa19.94■□□□□ 0.78
SDC2-202ENST00000518385 PEX10O60683 326 aa19.94■□□□□ 0.78
SDC2-202ENST00000518385 FAM13AO94988 1023 aa19.94■□□□□ 0.78
SDC2-202ENST00000518385 SFNP31947 248 aa19.94■□□□□ 0.78
SDC2-202ENST00000518385 ZNF157P51786 506 aaPredicted RBP19.94■□□□□ 0.78
SDC2-202ENST00000518385 JAK3P52333 1124 aa19.94■□□□□ 0.78
SDC2-202ENST00000518385 ZNF131P52739 623 aa19.94■□□□□ 0.78
SDC2-202ENST00000518385 C2orf54Q08AI8 447 aa19.94■□□□□ 0.78
SDC2-202ENST00000518385 C8orf74Q6P047 294 aa19.94■□□□□ 0.78
SDC2-202ENST00000518385 KDM7AQ6ZMT4 941 aa19.94■□□□□ 0.78
SDC2-202ENST00000518385 NLRX1Q86UT6 975 aa19.94■□□□□ 0.78
SDC2-202ENST00000518385 SFR1Q86XK3 245 aa19.94■□□□□ 0.78
SDC2-202ENST00000518385 GLIS3Q8NEA6 775 aa19.94■□□□□ 0.78
SDC2-202ENST00000518385 GPRASP2Q96D09 838 aa19.94■□□□□ 0.78
SDC2-202ENST00000518385 RUSC1Q9BVN2 902 aa19.94■□□□□ 0.78
SDC2-202ENST00000518385 ZHX3Q9H4I2 956 aa19.94■□□□□ 0.78
SDC2-202ENST00000518385 CYP39A1Q9NYL5 469 aa19.94■□□□□ 0.78
SDC2-202ENST00000518385 TCEAL9Q9UHQ7 104 aa19.94■□□□□ 0.78
SDC2-202ENST00000518385 AKR1B10O60218 316 aa19.93■□□□□ 0.78
SDC2-202ENST00000518385 SLC25A27O95847 323 aa19.93■□□□□ 0.78
SDC2-202ENST00000518385 RPL13P26373 211 aaKnown RBP19.93■□□□□ 0.78
SDC2-202ENST00000518385 MAGEA1P43355 309 aa19.93■□□□□ 0.78
SDC2-202ENST00000518385 KRT76Q01546 638 aa19.93■□□□□ 0.78
SDC2-202ENST00000518385 NFIL3Q16649 462 aa19.93■□□□□ 0.78
SDC2-202ENST00000518385 CCDC40Q4G0X9 1142 aa19.93■□□□□ 0.78
SDC2-202ENST00000518385 C10orf76Q5T2E6 689 aa19.93■□□□□ 0.78
SDC2-202ENST00000518385 VSIG10LQ86VR7 867 aa19.93■□□□□ 0.78
SDC2-202ENST00000518385 RASAL3Q86YV0 1011 aa19.93■□□□□ 0.78
SDC2-202ENST00000518385 ARFGAP2Q8N6H7 521 aa19.93■□□□□ 0.78
SDC2-202ENST00000518385 IL31RAQ8NI17 732 aa19.93■□□□□ 0.78
SDC2-202ENST00000518385 NSUN6Q8TEA1 469 aaKnown RBP19.93■□□□□ 0.78
SDC2-202ENST00000518385 CDHR1Q96JP9 859 aa19.93■□□□□ 0.78
SDC2-202ENST00000518385 LXNQ9BS40 222 aa19.93■□□□□ 0.78
SDC2-202ENST00000518385 TIPINQ9BVW5 301 aa19.93■□□□□ 0.78
SDC2-202ENST00000518385 MOV10L1Q9BXT6 1211 aaKnown RBP19.93■□□□□ 0.78
SDC2-202ENST00000518385 PARVGQ9HBI0 331 aa19.93■□□□□ 0.78
SDC2-202ENST00000518385 TXNRD2Q9NNW7 524 aa19.93■□□□□ 0.78
SDC2-202ENST00000518385 A1CFQ9NQ94 594 aaKnown RBP19.93■□□□□ 0.78
SDC2-202ENST00000518385 GDF3Q9NR23 364 aa19.93■□□□□ 0.78
SDC2-202ENST00000518385 TBC1D7Q9P0N9 293 aa19.93■□□□□ 0.78
SDC2-202ENST00000518385 FAM169AQ9Y6X4 670 aa19.93■□□□□ 0.78
SDC2-202ENST00000518385 MACROD2A1Z1Q3 448 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms