RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 ZFATQ9P243 1243 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 ZNF804BA4D1E1 1349 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 XIRP1Q702N8 1843 aaKnown RBP8.22□□□□□ -1.09
NEDD9-208ENST00000504387 SNUPNO95149 360 aaKnown RBP8.22□□□□□ -1.09
NEDD9-208ENST00000504387 BAG3O95817 575 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 MYBP10242 640 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 EPHB2P29323 1055 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 PDE6CP51160 858 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 ZNF131P52739 623 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 LRRC63Q05C16 580 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 CTTNQ14247 550 aaKnown RBP8.22□□□□□ -1.09
NEDD9-208ENST00000504387 CCDC6Q16204 474 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 SLC30A9Q6PML9 568 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 SPATA21Q7Z572 469 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 APBB1IPQ7Z5R6 666 aaPredicted RBP8.22□□□□□ -1.09
NEDD9-208ENST00000504387 PIGWQ7Z7B1 504 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 ACTRT1Q8TDG2 376 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 SCFD1Q8WVM8 642 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 TEKT4Q8WW24 435 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 RUBCNQ92622 972 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 C9orf72Q96LT7 481 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 SYT15Q9BQS2 421 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 RAB17Q9H0T7 212 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 ASIC3Q9UHC3 531 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 ATRNO75882 1429 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 SLIT3O75094 1523 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 A0A1W2PRG0 241 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 XRCC5P13010 732 aaKnown RBP8.22□□□□□ -1.09
NEDD9-208ENST00000504387 PON1P27169 355 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 CNGA1P29973 690 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 CYP2J2P51589 502 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 MUM1Q2TAK8 710 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 INTS8Q75QN2 995 aaKnown RBP8.22□□□□□ -1.09
NEDD9-208ENST00000504387 CYP4X1Q8N118 509 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 TLCD1Q96CP7 247 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 C12orf65Q9H3J6 166 aaKnown RBP8.22□□□□□ -1.09
NEDD9-208ENST00000504387 PICK1Q9NRD5 415 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 DCTN4Q9UJW0 460 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 GGA2Q9UJY4 613 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 PCDHA12Q9UN75 941 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 FAM196BA6NMK8 535 aa8.21□□□□□ -1.09
NEDD9-208ENST00000504387 USP17L15C9J2P7 530 aa8.21□□□□□ -1.09
NEDD9-208ENST00000504387 USP17L13C9JLJ4 530 aa8.21□□□□□ -1.09
NEDD9-208ENST00000504387 USP17L11C9JVI0 530 aa8.21□□□□□ -1.09
NEDD9-208ENST00000504387 USP17L18D6R9N7 530 aa8.21□□□□□ -1.09
NEDD9-208ENST00000504387 USP17L22D6RA61 530 aa8.21□□□□□ -1.09
NEDD9-208ENST00000504387 USP17L17D6RBQ6 530 aa8.21□□□□□ -1.09
NEDD9-208ENST00000504387 USP17L19D6RCP7 530 aa8.21□□□□□ -1.09
NEDD9-208ENST00000504387 USP17L20D6RJB6 530 aa8.21□□□□□ -1.09
NEDD9-208ENST00000504387 GCNT3O95395 438 aa8.21□□□□□ -1.09
NEDD9-208ENST00000504387 ZCCHC18P0CG32 403 aa8.21□□□□□ -1.09
NEDD9-208ENST00000504387 DLATP10515 647 aaKnown RBP8.21□□□□□ -1.09
NEDD9-208ENST00000504387 GHRP10912 638 aa8.21□□□□□ -1.09
NEDD9-208ENST00000504387 MMP13P45452 471 aa8.21□□□□□ -1.09
NEDD9-208ENST00000504387 USP17L24Q0WX57 530 aa8.21□□□□□ -1.09
NEDD9-208ENST00000504387 AUHQ13825 339 aaKnown RBP8.21□□□□□ -1.09
NEDD9-208ENST00000504387 ZFYVE27Q5T4F4 411 aa8.21□□□□□ -1.09
NEDD9-208ENST00000504387 CDCA2Q69YH5 1023 aaPredicted RBP8.21□□□□□ -1.09
NEDD9-208ENST00000504387 TTC27Q6P3X3 843 aa8.21□□□□□ -1.09
NEDD9-208ENST00000504387 CCDC137Q6PK04 289 aaKnown RBP8.21□□□□□ -1.09
NEDD9-208ENST00000504387 USP17L6PQ6QN14 398 aa8.21□□□□□ -1.09
NEDD9-208ENST00000504387 VPS36Q86VN1 386 aa8.21□□□□□ -1.09
NEDD9-208ENST00000504387 MAB21L3Q8N8X9 362 aa8.21□□□□□ -1.09
NEDD9-208ENST00000504387 CNBD1Q8NA66 436 aa8.21□□□□□ -1.09
NEDD9-208ENST00000504387 KLHL14Q9P2G3 628 aa8.21□□□□□ -1.09
NEDD9-208ENST00000504387 RPTORQ8N122 1335 aa8.21□□□□□ -1.1
NEDD9-208ENST00000504387 LRRD1A4D1F6 860 aa8.21□□□□□ -1.1
NEDD9-208ENST00000504387 POC1B-GALNT4F8VUJ3 575 aa8.21□□□□□ -1.1
NEDD9-208ENST00000504387 AKAP3O75969 853 aa8.21□□□□□ -1.1
NEDD9-208ENST00000504387 UFL1O94874 794 aa8.21□□□□□ -1.1
NEDD9-208ENST00000504387 PLA2G4BP0C869 781 aa8.21□□□□□ -1.1
NEDD9-208ENST00000504387 CCND1P24385 295 aa8.21□□□□□ -1.1
NEDD9-208ENST00000504387 SSTR3P32745 418 aaPredicted RBP8.21□□□□□ -1.1
NEDD9-208ENST00000504387 SCNN1DP51172 638 aa8.21□□□□□ -1.1
NEDD9-208ENST00000504387 MGAT5Q09328 741 aa8.21□□□□□ -1.1
NEDD9-208ENST00000504387 TCP10Q12799 353 aa8.21□□□□□ -1.1
NEDD9-208ENST00000504387 ZNF268Q14587 947 aaPredicted RBP8.21□□□□□ -1.1
NEDD9-208ENST00000504387 NFIXQ14938 502 aa8.21□□□□□ -1.1
NEDD9-208ENST00000504387 IFI16Q16666 785 aaKnown RBP8.21□□□□□ -1.1
NEDD9-208ENST00000504387 PPP1R15BQ5SWA1 713 aa8.21□□□□□ -1.1
NEDD9-208ENST00000504387 EMC10Q5UCC4 262 aa8.21□□□□□ -1.1
NEDD9-208ENST00000504387 TTBK2Q6IQ55 1244 aa8.21□□□□□ -1.1
NEDD9-208ENST00000504387 ARMC9Q7Z3E5 817 aa8.21□□□□□ -1.1
NEDD9-208ENST00000504387 KRT25Q7Z3Z0 450 aa8.21□□□□□ -1.1
NEDD9-208ENST00000504387 SFR1Q86XK3 245 aa8.21□□□□□ -1.1
NEDD9-208ENST00000504387 TRIM59Q8IWR1 403 aa8.21□□□□□ -1.1
NEDD9-208ENST00000504387 FBF1Q8TES7 1133 aa8.21□□□□□ -1.1
NEDD9-208ENST00000504387 C8orf37Q96NL8 207 aa8.21□□□□□ -1.1
NEDD9-208ENST00000504387 BRIP1Q9BX63 1249 aa8.21□□□□□ -1.1
NEDD9-208ENST00000504387 HEMGNQ9BXL5 484 aa8.21□□□□□ -1.1
NEDD9-208ENST00000504387 PITPNM3Q9BZ71 974 aa8.21□□□□□ -1.1
NEDD9-208ENST00000504387 GANQ9H2C0 597 aa8.21□□□□□ -1.1
NEDD9-208ENST00000504387 ETAA1Q9NY74 926 aa8.21□□□□□ -1.1
NEDD9-208ENST00000504387 ANAPC4Q9UJX5 808 aa8.21□□□□□ -1.1
NEDD9-208ENST00000504387 C2CD2Q9Y426 696 aa8.21□□□□□ -1.1
NEDD9-208ENST00000504387 USH1CQ9Y6N9 552 aa8.21□□□□□ -1.1
NEDD9-208ENST00000504387 AFF2P51816 1311 aa8.21□□□□□ -1.1
NEDD9-208ENST00000504387 TRPM3Q9HCF6 1732 aaPredicted RBP8.21□□□□□ -1.1
NEDD9-208ENST00000504387 COL5A2P05997 1499 aaPredicted RBP8.21□□□□□ -1.1
NEDD9-208ENST00000504387 MYH4Q9Y623 1939 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms