RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 H0YCG3 227 aa18.43■□□□□ 0.54
HMGXB3-201ENST00000502717 CUL3Q13618 768 aa18.43■□□□□ 0.54
HMGXB3-201ENST00000502717 DRAP1Q14919 205 aaPredicted RBP18.43■□□□□ 0.54
HMGXB3-201ENST00000502717 DALRD3Q5D0E6 543 aaKnown RBP18.43■□□□□ 0.54
HMGXB3-201ENST00000502717 SLFN13Q68D06 897 aa18.43■□□□□ 0.54
HMGXB3-201ENST00000502717 GLYCTKQ8IVS8 523 aa18.43■□□□□ 0.54
HMGXB3-201ENST00000502717 PDIK1LQ8N165 341 aa18.43■□□□□ 0.54
HMGXB3-201ENST00000502717 CDKL2Q92772 493 aa18.43■□□□□ 0.54
HMGXB3-201ENST00000502717 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.43■□□□□ 0.54
HMGXB3-201ENST00000502717 MYOM1P52179 1685 aa18.43■□□□□ 0.54
HMGXB3-201ENST00000502717 NOP56O00567 594 aaKnown RBP18.43■□□□□ 0.54
HMGXB3-201ENST00000502717 NMT2O60551 498 aa18.43■□□□□ 0.54
HMGXB3-201ENST00000502717 POLR2MP0CAP2 368 aa18.43■□□□□ 0.54
HMGXB3-201ENST00000502717 SCP2P22307 547 aa18.43■□□□□ 0.54
HMGXB3-201ENST00000502717 TMED1Q13445 227 aa18.43■□□□□ 0.54
HMGXB3-201ENST00000502717 MIS12Q9H081 205 aa18.43■□□□□ 0.54
HMGXB3-201ENST00000502717 KRT1P04264 644 aa18.43■□□□□ 0.54
HMGXB3-201ENST00000502717 DIXDC1Q155Q3 683 aa18.43■□□□□ 0.54
HMGXB3-201ENST00000502717 UBE2SQ16763 222 aa18.43■□□□□ 0.54
HMGXB3-201ENST00000502717 SFR1Q86XK3 245 aa18.43■□□□□ 0.54
HMGXB3-201ENST00000502717 ERP44Q9BS26 406 aa18.43■□□□□ 0.54
HMGXB3-201ENST00000502717 IRAK4Q9NWZ3 460 aa18.43■□□□□ 0.54
HMGXB3-201ENST00000502717 RNF8O76064 485 aa18.42■□□□□ 0.54
HMGXB3-201ENST00000502717 ARFIP2P53365 341 aa18.42■□□□□ 0.54
HMGXB3-201ENST00000502717 PDIA5Q14554 519 aa18.42■□□□□ 0.54
HMGXB3-201ENST00000502717 DNAJC9Q8WXX5 260 aa18.42■□□□□ 0.54
HMGXB3-201ENST00000502717 TMEM47Q9BQJ4 181 aa18.42■□□□□ 0.54
HMGXB3-201ENST00000502717 BHMT2Q9H2M3 363 aa18.42■□□□□ 0.54
HMGXB3-201ENST00000502717 E9PMD0 336 aa18.42■□□□□ 0.54
HMGXB3-201ENST00000502717 PHF2O75151 1096 aa18.42■□□□□ 0.54
HMGXB3-201ENST00000502717 CYP19A1P11511 503 aaPredicted RBP18.42■□□□□ 0.54
HMGXB3-201ENST00000502717 NQO1P15559 274 aaKnown RBP18.42■□□□□ 0.54
HMGXB3-201ENST00000502717 GRAMD1BQ3KR37 738 aa18.42■□□□□ 0.54
HMGXB3-201ENST00000502717 CCDC117Q8IWD4 279 aaPredicted RBP18.42■□□□□ 0.54
HMGXB3-201ENST00000502717 TSPYL2Q9H2G4 693 aaPredicted RBP18.42■□□□□ 0.54
HMGXB3-201ENST00000502717 PPARGC1AQ9UBK2 798 aaKnown RBP18.42■□□□□ 0.54
HMGXB3-201ENST00000502717 PLEKP08567 350 aaPredicted RBP18.42■□□□□ 0.54
HMGXB3-201ENST00000502717 ARL1P40616 181 aaPredicted RBP18.42■□□□□ 0.54
HMGXB3-201ENST00000502717 DEUP1Q05D60 604 aa18.42■□□□□ 0.54
HMGXB3-201ENST00000502717 TBC1D9BQ66K14 1250 aa18.42■□□□□ 0.54
HMGXB3-201ENST00000502717 TRIM59Q8IWR1 403 aa18.42■□□□□ 0.54
HMGXB3-201ENST00000502717 WDR11Q9BZH6 1224 aa18.42■□□□□ 0.54
HMGXB3-201ENST00000502717 NDE1Q9NXR1 346 aa18.42■□□□□ 0.54
HMGXB3-201ENST00000502717 CD163L1Q9NR16 1453 aa18.42■□□□□ 0.54
HMGXB3-201ENST00000502717 SOX5P35711 763 aa18.42■□□□□ 0.54
HMGXB3-201ENST00000502717 COL23A1Q86Y22 540 aaPredicted RBP18.42■□□□□ 0.54
HMGXB3-201ENST00000502717 CCDC17Q96LX7 622 aa18.42■□□□□ 0.54
HMGXB3-201ENST00000502717 SUCLA2Q9P2R7 463 aaPredicted RBP18.42■□□□□ 0.54
HMGXB3-201ENST00000502717 ARHGEF28Q8N1W1 1705 aaKnown RBP18.42■□□□□ 0.54
HMGXB3-201ENST00000502717 FAM237AA0A1B0GTK4 181 aa18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 CDH16O75309 829 aa18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 MDM1Q8TC05 714 aa18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 CHURC1Q8WUH1 139 aa18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 HPS3Q969F9 1004 aa18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 BSDC1Q9NW68 430 aaPredicted RBP18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 EPS15L1Q9UBC2 864 aa18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 ABT1Q9ULW3 272 aaKnown RBP18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 ALCAMQ13740 583 aa18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 GEN1Q17RS7 908 aa18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 TMEM154Q6P9G4 183 aa18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 LRRC34Q8IZ02 419 aa18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 PCIF1Q9H4Z3 704 aa18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 TRPC6Q9Y210 931 aa18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 MAD1L1Q9Y6D9 718 aa18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 ABCB11O95342 1321 aa18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 FTLP02792 175 aaPredicted RBP18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 MYCLP12524 364 aaPredicted RBP18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 KRT81Q14533 505 aa18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 XKR9Q5GH70 373 aa18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 KIF2BQ8N4N8 673 aa18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 GABPB2Q8TAK5 448 aaPredicted RBP18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 DCP1AQ9NPI6 582 aaPredicted RBP18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 CNOT8Q9UFF9 292 aaKnown RBP18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 DDX20Q9UHI6 824 aaKnown RBP18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 DCTN4Q9UJW0 460 aa18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 NVLO15381 856 aaKnown RBP18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 PDHBP11177 359 aa18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 LIG4P49917 911 aa18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 BBS9Q3SYG4 887 aa18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 SUPT20HL1Q3ZLR7 823 aa18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 C1orf146Q5VVC0 180 aa18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 JAMLQ86YT9 394 aa18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 CRLF3Q8IUI8 442 aa18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 POMGNT1Q8WZA1 660 aa18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 MRPL11Q9Y3B7 192 aaKnown RBP18.41■□□□□ 0.54
HMGXB3-201ENST00000502717 SHPRHQ149N8 1683 aa18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 M0QZ92 97 aa18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 DMP1Q13316 513 aaPredicted RBP18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 PLA2G12BQ9BX93 195 aa18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 ANAPC7Q9UJX3 599 aa18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 ITSN1Q15811 1721 aa18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 H7C0C1 242 aa18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 ATP5OP48047 213 aa18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 GALCP54803 685 aa18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 NXNQ6DKJ4 435 aa18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 LONP2Q86WA8 852 aa18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 CDAN1Q8IWY9 1227 aa18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 DBR1Q9UK59 544 aaKnown RBP18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 BBOX1O75936 387 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms