RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.28□□□□□ -0.44
CPSF7-212ENST00000489728 E9PMD0 336 aa12.28□□□□□ -0.44
CPSF7-212ENST00000489728 GJB5O95377 273 aa12.28□□□□□ -0.44
CPSF7-212ENST00000489728 PLA2G4BP0C869 781 aa12.28□□□□□ -0.44
CPSF7-212ENST00000489728 PLCG1P19174 1290 aa12.28□□□□□ -0.44
CPSF7-212ENST00000489728 SCP2P22307 547 aa12.28□□□□□ -0.44
CPSF7-212ENST00000489728 GLRA2P23416 452 aa12.28□□□□□ -0.44
CPSF7-212ENST00000489728 SLC12A3P55017 1021 aa12.28□□□□□ -0.44
CPSF7-212ENST00000489728 PTENP60484 403 aa12.28□□□□□ -0.44
CPSF7-212ENST00000489728 DNM1Q05193 864 aaKnown RBP12.28□□□□□ -0.44
CPSF7-212ENST00000489728 NFX1Q12986 1120 aaKnown RBP12.28□□□□□ -0.44
CPSF7-212ENST00000489728 CAPSQ13938 189 aa12.28□□□□□ -0.44
CPSF7-212ENST00000489728 FAM102BQ5T8I3 360 aa12.28□□□□□ -0.44
CPSF7-212ENST00000489728 CDCA2Q69YH5 1023 aaPredicted RBP12.28□□□□□ -0.44
CPSF7-212ENST00000489728 CCDC73Q6ZRK6 1079 aa12.28□□□□□ -0.44
CPSF7-212ENST00000489728 C1orf186Q6ZWK4 172 aa12.28□□□□□ -0.44
CPSF7-212ENST00000489728 KCNK18Q7Z418 384 aa12.28□□□□□ -0.44
CPSF7-212ENST00000489728 RNF149Q8NC42 400 aa12.28□□□□□ -0.44
CPSF7-212ENST00000489728 TOP1MTQ969P6 601 aa12.28□□□□□ -0.44
CPSF7-212ENST00000489728 PYM1Q9BRP8 204 aaKnown RBP12.28□□□□□ -0.44
CPSF7-212ENST00000489728 RGS18Q9NS28 235 aa12.28□□□□□ -0.44
CPSF7-212ENST00000489728 DACT1Q9NYF0 836 aa12.28□□□□□ -0.44
CPSF7-212ENST00000489728 MSRAQ9UJ68 235 aa12.28□□□□□ -0.44
CPSF7-212ENST00000489728 ODF2LQ9ULJ1 636 aa12.28□□□□□ -0.44
CPSF7-212ENST00000489728 PTPRSQ13332 1948 aa12.28□□□□□ -0.44
CPSF7-212ENST00000489728 DENND3A2RUS2 1198 aa12.27□□□□□ -0.45
CPSF7-212ENST00000489728 SOX1O00570 391 aaPredicted RBP12.27□□□□□ -0.45
CPSF7-212ENST00000489728 ENPP3O14638 875 aa12.27□□□□□ -0.45
CPSF7-212ENST00000489728 STAG3L1P0CL83 205 aa12.27□□□□□ -0.45
CPSF7-212ENST00000489728 SKIP12755 728 aa12.27□□□□□ -0.45
CPSF7-212ENST00000489728 ZSCAN20P17040 1043 aaPredicted RBP12.27□□□□□ -0.45
CPSF7-212ENST00000489728 DNAJB2P25686 324 aa12.27□□□□□ -0.45
CPSF7-212ENST00000489728 AXLP30530 894 aa12.27□□□□□ -0.45
CPSF7-212ENST00000489728 ME1P48163 572 aa12.27□□□□□ -0.45
CPSF7-212ENST00000489728 DEFB103AP81534 67 aa12.27□□□□□ -0.45
CPSF7-212ENST00000489728 HTRA4P83105 476 aaPredicted RBP12.27□□□□□ -0.45
CPSF7-212ENST00000489728 DSC3Q14574 896 aa12.27□□□□□ -0.45
CPSF7-212ENST00000489728 KARSQ15046 597 aaKnown RBP12.27□□□□□ -0.45
CPSF7-212ENST00000489728 ZRSR1Q15695 479 aaKnown RBP12.27□□□□□ -0.45
CPSF7-212ENST00000489728 RINT1Q6NUQ1 792 aa12.27□□□□□ -0.45
CPSF7-212ENST00000489728 SLC24A5Q71RS6 500 aa12.27□□□□□ -0.45
CPSF7-212ENST00000489728 NPAS4Q8IUM7 802 aa12.27□□□□□ -0.45
CPSF7-212ENST00000489728 KSR1Q8IVT5 923 aa12.27□□□□□ -0.45
CPSF7-212ENST00000489728 ASAP3Q8TDY4 903 aa12.27□□□□□ -0.45
CPSF7-212ENST00000489728 LARP4BQ92615 738 aaKnown RBP12.27□□□□□ -0.45
CPSF7-212ENST00000489728 RAD54LQ92698 747 aa12.27□□□□□ -0.45
CPSF7-212ENST00000489728 CCDC51Q96ER9 411 aa12.27□□□□□ -0.45
CPSF7-212ENST00000489728 EPSTI1Q96J88 318 aa12.27□□□□□ -0.45
CPSF7-212ENST00000489728 IFT74Q96LB3 600 aa12.27□□□□□ -0.45
CPSF7-212ENST00000489728 PRIMPOLQ96LW4 560 aa12.27□□□□□ -0.45
CPSF7-212ENST00000489728 CLIC6Q96NY7 704 aa12.27□□□□□ -0.45
CPSF7-212ENST00000489728 PPP1R16BQ96T49 567 aa12.27□□□□□ -0.45
CPSF7-212ENST00000489728 RAD9AQ99638 391 aa12.27□□□□□ -0.45
CPSF7-212ENST00000489728 TMX1Q9H3N1 280 aa12.27□□□□□ -0.45
CPSF7-212ENST00000489728 CUEDC2Q9H467 287 aa12.27□□□□□ -0.45
CPSF7-212ENST00000489728 ELAC1Q9H777 363 aaKnown RBP12.27□□□□□ -0.45
CPSF7-212ENST00000489728 BMP2KQ9NSY1 1161 aaPredicted RBP12.27□□□□□ -0.45
CPSF7-212ENST00000489728 BLOC1S4Q9NUP1 217 aa12.27□□□□□ -0.45
CPSF7-212ENST00000489728 AGPAT5Q9NUQ2 364 aa12.27□□□□□ -0.45
CPSF7-212ENST00000489728 INSL6Q9Y581 213 aa12.27□□□□□ -0.45
CPSF7-212ENST00000489728 TTC3P53804 2025 aa12.27□□□□□ -0.45
CPSF7-212ENST00000489728 A0A087WWV3 80 aa12.26□□□□□ -0.45
CPSF7-212ENST00000489728 C9IYK1 514 aa12.26□□□□□ -0.45
CPSF7-212ENST00000489728 ERLIN2O94905 339 aa12.26□□□□□ -0.45
CPSF7-212ENST00000489728 SRGAP2CP0DJJ0 459 aa12.26□□□□□ -0.45
CPSF7-212ENST00000489728 ABCD1P33897 745 aa12.26□□□□□ -0.45
CPSF7-212ENST00000489728 SARSP49591 514 aaKnown RBP12.26□□□□□ -0.45
CPSF7-212ENST00000489728 RAB27AP51159 221 aa12.26□□□□□ -0.45
CPSF7-212ENST00000489728 EFNA5P52803 228 aa12.26□□□□□ -0.45
CPSF7-212ENST00000489728 FAM189BP81408 668 aa12.26□□□□□ -0.45
CPSF7-212ENST00000489728 NCBP1Q09161 790 aaKnown RBP12.26□□□□□ -0.45
CPSF7-212ENST00000489728 DMP1Q13316 513 aaPredicted RBP12.26□□□□□ -0.45
CPSF7-212ENST00000489728 FAM187BQ17R55 369 aa12.26□□□□□ -0.45
CPSF7-212ENST00000489728 AXDND1Q5T1B0 1012 aaPredicted RBP12.26□□□□□ -0.45
CPSF7-212ENST00000489728 RRAGBQ5VZM2 374 aa12.26□□□□□ -0.45
CPSF7-212ENST00000489728 PPP4R3CPQ6ZMV5 832 aa12.26□□□□□ -0.45
CPSF7-212ENST00000489728 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.26□□□□□ -0.45
CPSF7-212ENST00000489728 USP49Q70CQ1 688 aa12.26□□□□□ -0.45
CPSF7-212ENST00000489728 CATSPER4Q7RTX7 472 aa12.26□□□□□ -0.45
CPSF7-212ENST00000489728 ZBTB8OSQ8IWT0 167 aa12.26□□□□□ -0.45
CPSF7-212ENST00000489728 MYOCDQ8IZQ8 938 aa12.26□□□□□ -0.45
CPSF7-212ENST00000489728 CRIPAKQ8N1N5 446 aa12.26□□□□□ -0.45
CPSF7-212ENST00000489728 SP7Q8TDD2 431 aaPredicted RBP12.26□□□□□ -0.45
CPSF7-212ENST00000489728 LINC01599Q8WXQ3 324 aa12.26□□□□□ -0.45
CPSF7-212ENST00000489728 KCNN1Q92952 543 aa12.26□□□□□ -0.45
CPSF7-212ENST00000489728 SPATA32Q96LK8 384 aa12.26□□□□□ -0.45
CPSF7-212ENST00000489728 ADAM2Q99965 735 aa12.26□□□□□ -0.45
CPSF7-212ENST00000489728 RUSC1Q9BVN2 902 aa12.26□□□□□ -0.45
CPSF7-212ENST00000489728 PBX4Q9BYU1 374 aa12.26□□□□□ -0.45
CPSF7-212ENST00000489728 MAGEF1Q9HAY2 307 aa12.26□□□□□ -0.45
CPSF7-212ENST00000489728 GPRC5CQ9NQ84 441 aa12.26□□□□□ -0.45
CPSF7-212ENST00000489728 GBF1Q92538 1859 aa12.25□□□□□ -0.45
CPSF7-212ENST00000489728 LRRIQ4A6NIV6 560 aa12.25□□□□□ -0.45
CPSF7-212ENST00000489728 HOXA2O43364 376 aa12.25□□□□□ -0.45
CPSF7-212ENST00000489728 TLL1O43897 1013 aa12.25□□□□□ -0.45
CPSF7-212ENST00000489728 HIP1RO75146 1068 aa12.25□□□□□ -0.45
CPSF7-212ENST00000489728 STAT6P42226 847 aa12.25□□□□□ -0.45
CPSF7-212ENST00000489728 MBTD1Q05BQ5 628 aa12.25□□□□□ -0.45
CPSF7-212ENST00000489728 MAPK7Q13164 816 aa12.25□□□□□ -0.45
CPSF7-212ENST00000489728 SPECC1Q5M775 1068 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms