RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 ANKRD18BA2A2Z9 1011 aa4.53□□□□□ -1.68
LRCH3-213ENST00000471667 LOC730098B7Z3J9 87 aa4.53□□□□□ -1.68
LRCH3-213ENST00000471667 ZEB2O60315 1214 aa4.53□□□□□ -1.68
LRCH3-213ENST00000471667 CABYRO75952 493 aa4.53□□□□□ -1.68
LRCH3-213ENST00000471667 C6orf222P0C671 652 aaPredicted RBP4.53□□□□□ -1.68
LRCH3-213ENST00000471667 ADORA2AP29274 412 aa4.53□□□□□ -1.68
LRCH3-213ENST00000471667 CDK7P50613 346 aa4.53□□□□□ -1.68
LRCH3-213ENST00000471667 CHAF1AQ13111 956 aaPredicted RBP4.53□□□□□ -1.68
LRCH3-213ENST00000471667 CBX2Q14781 532 aaPredicted RBP4.53□□□□□ -1.68
LRCH3-213ENST00000471667 KCNA10Q16322 511 aa4.53□□□□□ -1.68
LRCH3-213ENST00000471667 NKG7Q16617 165 aa4.53□□□□□ -1.68
LRCH3-213ENST00000471667 CAVIN4Q5BKX8 364 aa4.53□□□□□ -1.68
LRCH3-213ENST00000471667 TAF7LQ5H9L4 462 aa4.53□□□□□ -1.68
LRCH3-213ENST00000471667 HDXQ7Z353 690 aa4.53□□□□□ -1.68
LRCH3-213ENST00000471667 LRP10Q7Z4F1 713 aa4.53□□□□□ -1.68
LRCH3-213ENST00000471667 C1QL4Q86Z23 238 aa4.53□□□□□ -1.68
LRCH3-213ENST00000471667 CCDC105Q8IYK2 499 aa4.53□□□□□ -1.68
LRCH3-213ENST00000471667 TTLL11Q8NHH1 800 aa4.53□□□□□ -1.68
LRCH3-213ENST00000471667 RPGRIP1Q96KN7 1286 aa4.53□□□□□ -1.68
LRCH3-213ENST00000471667 PHACTR3Q96KR7 559 aa4.53□□□□□ -1.68
LRCH3-213ENST00000471667 RAD9AQ99638 391 aa4.53□□□□□ -1.68
LRCH3-213ENST00000471667 PHF7Q9BWX1 381 aaPredicted RBP4.53□□□□□ -1.68
LRCH3-213ENST00000471667 WNT10AQ9GZT5 417 aa4.53□□□□□ -1.68
LRCH3-213ENST00000471667 HYPKQ9NX55 129 aa4.53□□□□□ -1.68
LRCH3-213ENST00000471667 GMEB2Q9UKD1 530 aa4.53□□□□□ -1.68
LRCH3-213ENST00000471667 FAM184BQ9ULE4 1060 aa4.53□□□□□ -1.68
LRCH3-213ENST00000471667 CAPN6Q9Y6Q1 641 aa4.53□□□□□ -1.68
LRCH3-213ENST00000471667 EP300Q09472 2414 aaPredicted RBP4.53□□□□□ -1.68
LRCH3-213ENST00000471667 ROBO3Q96MS0 1386 aa4.53□□□□□ -1.69
LRCH3-213ENST00000471667 CHD9Q3L8U1 2897 aa4.52□□□□□ -1.69
LRCH3-213ENST00000471667 EFCAB14O75071 495 aa4.52□□□□□ -1.69
LRCH3-213ENST00000471667 ENTPD3O75355 529 aa4.52□□□□□ -1.69
LRCH3-213ENST00000471667 TAF5LO75529 589 aa4.52□□□□□ -1.69
LRCH3-213ENST00000471667 DDX58O95786 925 aaKnown RBP4.52□□□□□ -1.69
LRCH3-213ENST00000471667 PDGFBP01127 241 aaPredicted RBP4.52□□□□□ -1.69
LRCH3-213ENST00000471667 ASGR1P07306 291 aa4.52□□□□□ -1.69
LRCH3-213ENST00000471667 CAP2P40123 477 aa4.52□□□□□ -1.69
LRCH3-213ENST00000471667 BACE1P56817 501 aa4.52□□□□□ -1.69
LRCH3-213ENST00000471667 ETF1P62495 437 aaKnown RBP4.52□□□□□ -1.69
LRCH3-213ENST00000471667 WIPI1Q5MNZ9 446 aaPredicted RBP4.52□□□□□ -1.69
LRCH3-213ENST00000471667 PRAMEF19Q5SWL8 479 aa4.52□□□□□ -1.69
LRCH3-213ENST00000471667 IL31Q6EBC2 164 aa4.52□□□□□ -1.69
LRCH3-213ENST00000471667 ALG1LQ6GMV1 187 aa4.52□□□□□ -1.69
LRCH3-213ENST00000471667 APOBEC3HQ6NTF7 200 aaKnown RBP4.52□□□□□ -1.69
LRCH3-213ENST00000471667 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.52□□□□□ -1.69
LRCH3-213ENST00000471667 LCNL1Q6ZST4 164 aa4.52□□□□□ -1.69
LRCH3-213ENST00000471667 HID1Q8IV36 788 aa4.52□□□□□ -1.69
LRCH3-213ENST00000471667 LRRC56Q8IYG6 542 aaPredicted RBP4.52□□□□□ -1.69
LRCH3-213ENST00000471667 DCLK2Q8N568 766 aa4.52□□□□□ -1.69
LRCH3-213ENST00000471667 MFSD2AQ8NA29 543 aa4.52□□□□□ -1.69
LRCH3-213ENST00000471667 ZSCAN18Q8TBC5 510 aaPredicted RBP4.52□□□□□ -1.69
LRCH3-213ENST00000471667 GAL3ST3Q96A11 431 aa4.52□□□□□ -1.69
LRCH3-213ENST00000471667 SCLYQ96I15 445 aa4.52□□□□□ -1.69
LRCH3-213ENST00000471667 DIRC2Q96SL1 478 aa4.52□□□□□ -1.69
LRCH3-213ENST00000471667 MYD88Q99836 296 aa4.52□□□□□ -1.69
LRCH3-213ENST00000471667 NOC4LQ9BVI4 516 aaKnown RBP4.52□□□□□ -1.69
LRCH3-213ENST00000471667 PANK3Q9H999 370 aa4.52□□□□□ -1.69
LRCH3-213ENST00000471667 USP40Q9NVE5 1235 aa4.52□□□□□ -1.69
LRCH3-213ENST00000471667 SORCS3Q9UPU3 1222 aa4.52□□□□□ -1.69
LRCH3-213ENST00000471667 NR2E1Q9Y466 385 aa4.52□□□□□ -1.69
LRCH3-213ENST00000471667 ST14Q9Y5Y6 855 aa4.52□□□□□ -1.69
LRCH3-213ENST00000471667 GCN1Q92616 2671 aaKnown RBP4.51□□□□□ -1.69
LRCH3-213ENST00000471667 PHIPQ8WWQ0 1821 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 SYNRGQ9UMZ2 1314 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 DNAH12Q6ZR08 3092 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 FSD2A1L4K1 749 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 KRTAP9-7A8MTY7 169 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 PLIN1O60240 522 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 FOXD2O60548 495 aaPredicted RBP4.51□□□□□ -1.69
LRCH3-213ENST00000471667 CBX7O95931 251 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 CD4P01730 458 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 KRT1P04264 644 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 USP17L7P0C7H9 530 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 C1QTNF9P0C862 333 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 SRGAP2BP0DMP2 458 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 AOC1P19801 751 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 CST5P28325 142 aaPredicted RBP4.51□□□□□ -1.69
LRCH3-213ENST00000471667 PMLP29590 882 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 CDK8P49336 464 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 NEXNQ0ZGT2 675 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 GPM6BQ13491 265 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 PRAMEF13Q5VWM6 474 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 LETMD1Q6P1Q0 360 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 THAP5Q7Z6K1 395 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 CCDC84Q86UT8 332 aaPredicted RBP4.51□□□□□ -1.69
LRCH3-213ENST00000471667 DTWD2Q8NBA8 298 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 FBXO15Q8NCQ5 510 aaPredicted RBP4.51□□□□□ -1.69
LRCH3-213ENST00000471667 RIN3Q8TB24 985 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 CCDC120Q96HB5 630 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 ALPK1Q96QP1 1244 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 KRTAP4-2Q9BYR5 136 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 LMAN2LQ9H0V9 348 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 C12orf49Q9H741 205 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 CHPF2Q9P2E5 772 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 FAM8A1Q9UBU6 413 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 INSL6Q9Y581 213 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 R4GN57 208 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 BRWD1Q9NSI6 2320 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 PLXNB2O15031 1838 aa4.51□□□□□ -1.69
LRCH3-213ENST00000471667 GBF1Q92538 1859 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms