RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 FESP07332 822 aa8.58□□□□□ -1.04
TPM3-215ENST00000469717 NUDT17P0C025 328 aa8.58□□□□□ -1.04
TPM3-215ENST00000469717 NEFHP12036 1026 aa8.58□□□□□ -1.04
TPM3-215ENST00000469717 KIF5BP33176 963 aa8.58□□□□□ -1.04
TPM3-215ENST00000469717 EIF3BP55884 814 aaKnown RBP8.58□□□□□ -1.04
TPM3-215ENST00000469717 TBC1D25Q3MII6 688 aa8.58□□□□□ -1.04
TPM3-215ENST00000469717 FAM26FQ5R3K3 315 aa8.58□□□□□ -1.04
TPM3-215ENST00000469717 SUSD4Q5VX71 490 aa8.58□□□□□ -1.04
TPM3-215ENST00000469717 CWF19L1Q69YN2 538 aaKnown RBP8.58□□□□□ -1.04
TPM3-215ENST00000469717 USP17L2Q6R6M4 530 aa8.58□□□□□ -1.04
TPM3-215ENST00000469717 PTF1AQ7RTS3 328 aa8.58□□□□□ -1.04
TPM3-215ENST00000469717 SPATA21Q7Z572 469 aa8.58□□□□□ -1.04
TPM3-215ENST00000469717 SLC51AQ86UW1 340 aa8.58□□□□□ -1.04
TPM3-215ENST00000469717 KRT35Q92764 455 aa8.58□□□□□ -1.04
TPM3-215ENST00000469717 UBA5Q9GZZ9 404 aa8.58□□□□□ -1.04
TPM3-215ENST00000469717 CUEDC2Q9H467 287 aa8.58□□□□□ -1.04
TPM3-215ENST00000469717 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.58□□□□□ -1.048e-7■■■■■ 194.6
TPM3-215ENST00000469717 MCM9Q9NXL9 1143 aa8.58□□□□□ -1.04
TPM3-215ENST00000469717 SLIT2O94813 1529 aa8.58□□□□□ -1.04
TPM3-215ENST00000469717 PTENP60484 403 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 NONOQ15233 471 aaKnown RBP eCLIP8.57□□□□□ -1.041e-7■■■■□ 26.2
TPM3-215ENST00000469717 KIAA1755Q5JYT7 1200 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 FOXB2Q5VYV0 432 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 DPY19L2P1Q6NXN4 242 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 TMEM154Q6P9G4 183 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 NEK8Q86SG6 692 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 SLC35G2Q8TBE7 412 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 TBC1D16Q8TBP0 767 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 DNAJC19Q96DA6 116 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 HES6Q96HZ4 224 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 NUCKS1Q9H1E3 243 aaKnown RBP8.57□□□□□ -1.04
TPM3-215ENST00000469717 OCEL1Q9H607 264 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 HOMER3Q9NSC5 361 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 PLCH1Q4KWH8 1693 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 DDX3YO15523 660 aaKnown RBP8.57□□□□□ -1.04
TPM3-215ENST00000469717 RIPK2O43353 540 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 SUN1O94901 812 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 H2AFZP0C0S5 128 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 GNAZP19086 355 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 PRPHP41219 470 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 GRM1Q13255 1194 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 IFI16Q16666 785 aaKnown RBP8.57□□□□□ -1.04
TPM3-215ENST00000469717 EXOC3L4Q17RC7 722 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 ZC2HC1CQ53FD0 456 aaPredicted RBP8.57□□□□□ -1.04
TPM3-215ENST00000469717 H2AFVQ71UI9 128 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 CYP4X1Q8N118 509 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 LNX1Q8TBB1 728 aaPredicted RBP8.57□□□□□ -1.04
TPM3-215ENST00000469717 RAD54LQ92698 747 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 SYN2Q92777 582 aaPredicted RBP8.57□□□□□ -1.04
TPM3-215ENST00000469717 ARHGEF2Q92974 986 aaKnown RBP8.57□□□□□ -1.04
TPM3-215ENST00000469717 AK8Q96MA6 479 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 EPAS1Q99814 870 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 SEPT11Q9NVA2 429 aaKnown RBP8.57□□□□□ -1.04
TPM3-215ENST00000469717 TAF1P21675 1872 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 TRPM3Q9HCF6 1732 aaPredicted RBP8.57□□□□□ -1.04
TPM3-215ENST00000469717 HIP1RO75146 1068 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 CBX6O95503 412 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 EPHB2P29323 1055 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 CASP4P49662 377 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 SCFD1Q8WVM8 642 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 PPP1R12CQ9BZL4 782 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 NSRP1Q9H0G5 558 aaKnown RBP8.57□□□□□ -1.04
TPM3-215ENST00000469717 MYLK2Q9H1R3 596 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 KLRF2D3W0D1 207 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 FGFR1OPO95684 399 aaKnown RBP8.57□□□□□ -1.04
TPM3-215ENST00000469717 FGRP09769 529 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 TPBGLP0DKB5 382 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 NR2F2P24468 414 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 PON1P27169 355 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 MECOMQ03112 1051 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 CALCRLQ16602 461 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 DZIP1Q86YF9 867 aaKnown RBP8.57□□□□□ -1.04
TPM3-215ENST00000469717 COA7Q96BR5 231 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 ERP27Q96DN0 273 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 BRIP1Q9BX63 1249 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 USP40Q9NVE5 1235 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 HDAC9Q9UKV0 1011 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 AMFRQ9UKV5 643 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 COG5Q9UP83 839 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 SUGT1Q9Y2Z0 365 aa8.57□□□□□ -1.04
TPM3-215ENST00000469717 AHCYL1O43865 530 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 RTN3O95197 1032 aaPredicted RBP8.56□□□□□ -1.04
TPM3-215ENST00000469717 ZC3H12AQ5D1E8 599 aaKnown RBP8.56□□□□□ -1.04
TPM3-215ENST00000469717 HERC4Q5GLZ8 1057 aaPredicted RBP8.56□□□□□ -1.04
TPM3-215ENST00000469717 SLFN11Q7Z7L1 901 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 FAM13CQ8NE31 585 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 TGS1Q96RS0 853 aaKnown RBP8.56□□□□□ -1.04
TPM3-215ENST00000469717 NUDCD1Q96RS6 583 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 EDEM3Q9BZQ6 932 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 SLCO1B3Q9NPD5 702 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 SUCLA2Q9P2R7 463 aaPredicted RBP8.56□□□□□ -1.04
TPM3-215ENST00000469717 CACNA1SQ13698 1873 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 CASZ1Q86V15 1759 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 PVALEFA0A1B0GWK0 134 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 CES2O00748 559 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 AGTP01019 485 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 CETPP11597 493 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 POLD1P28340 1107 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 RANBP1P43487 201 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 PTDSS1P48651 473 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms