RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 EML1O00423 815 aa12.71□□□□□ -0.38
PDZRN3-203ENST00000462146 KIAA0391O15091 583 aaKnown RBP12.71□□□□□ -0.38
PDZRN3-203ENST00000462146 RPA1P27694 616 aa12.71□□□□□ -0.38
PDZRN3-203ENST00000462146 USH1GQ495M9 461 aa12.71□□□□□ -0.38
PDZRN3-203ENST00000462146 KIAA1755Q5JYT7 1200 aa12.71□□□□□ -0.38
PDZRN3-203ENST00000462146 HIBCHQ6NVY1 386 aaPredicted RBP12.71□□□□□ -0.38
PDZRN3-203ENST00000462146 CPNE8Q86YQ8 564 aa12.71□□□□□ -0.38
PDZRN3-203ENST00000462146 FAM186BQ8IYM0 893 aa12.71□□□□□ -0.38
PDZRN3-203ENST00000462146 KIRREL3Q8IZU9 778 aa12.71□□□□□ -0.38
PDZRN3-203ENST00000462146 CCDC197Q8NCU1 140 aa12.71□□□□□ -0.38
PDZRN3-203ENST00000462146 NEK9Q8TD19 979 aa12.71□□□□□ -0.38
PDZRN3-203ENST00000462146 CTNNBL1Q8WYA6 563 aaPredicted RBP12.71□□□□□ -0.38
PDZRN3-203ENST00000462146 TBC1D31Q96DN5 1066 aa12.71□□□□□ -0.38
PDZRN3-203ENST00000462146 FAM163AQ96GL9 167 aaPredicted RBP12.71□□□□□ -0.38
PDZRN3-203ENST00000462146 SYT11Q9BT88 431 aa12.71□□□□□ -0.38
PDZRN3-203ENST00000462146 PABPC3Q9H361 631 aaKnown RBP12.71□□□□□ -0.38
PDZRN3-203ENST00000462146 GRHL1Q9NZI5 618 aa12.71□□□□□ -0.38
PDZRN3-203ENST00000462146 SWAP70Q9UH65 585 aa12.71□□□□□ -0.38
PDZRN3-203ENST00000462146 SERPINB13Q9UIV8 391 aa12.71□□□□□ -0.38
PDZRN3-203ENST00000462146 INTUQ9ULD6 942 aa12.71□□□□□ -0.38
PDZRN3-203ENST00000462146 TTC7AQ9ULT0 858 aaPredicted RBP12.71□□□□□ -0.38
PDZRN3-203ENST00000462146 CCT8L1PA6NM43 557 aa12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 ANKRD63C9JTQ0 380 aa12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 PPIP5K2O43314 1243 aa12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 ECM2O94769 699 aaPredicted RBP12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 TMEM253P0C7T8 217 aa12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 SCP2P22307 547 aa12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 ELF1P32519 619 aa12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 RPL21P46778 160 aaKnown RBP12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 ELF3P78545 371 aaPredicted RBP12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 NBPF9Q3BBW0 867 aa12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 MEX3CQ5U5Q3 659 aaKnown RBP12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 TTC27Q6P3X3 843 aa12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 SLFN12Q8IYM2 578 aa12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 SLC20A1Q8WUM9 679 aa12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 MBOAT7Q96N66 472 aa12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 KDM4CQ9H3R0 1056 aa12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 CNOT10Q9H9A5 744 aaKnown RBP12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 METTL14Q9HCE5 456 aaKnown RBP12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 GGA1Q9UJY5 639 aa12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 BTAF1O14981 1849 aa12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 CYP3A7-CYP3A51PA0A087WV96 503 aa12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 SLC16A3O15427 465 aaKnown RBP12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 NUDT17P0C025 328 aa12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 VCAM1P19320 739 aa12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 CYP3A7P24462 503 aa12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 MMP13P45452 471 aa12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 FMO5P49326 533 aa12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 SCNN1DP51172 638 aa12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 CTTNQ14247 550 aaKnown RBP12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 PPP1R7Q15435 360 aa12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 BMT2Q1RMZ1 405 aa12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 FAM133BQ5BKY9 247 aaKnown RBP12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 GPATCH4Q5T3I0 446 aaKnown RBP12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 DENND2CQ68D51 928 aa12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 C15orf52Q6ZUT6 534 aaKnown RBP12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 HOOK3Q86VS8 718 aa12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 CNBD1Q8NA66 436 aa12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 CRYGNQ8WXF5 182 aa12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 ELAC2Q9BQ52 826 aaKnown RBP12.7□□□□□ -0.38
PDZRN3-203ENST00000462146 TCRBV7S2A1N4TA0A589 114 aa12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 RIMBP2O15034 1052 aa12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 MGRN1O60291 552 aa12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 TBCAO75347 108 aaKnown RBP12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 DNAJC8O75937 253 aaPredicted RBP12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 PTGIRP43119 386 aa12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 CYP2J2P51589 502 aa12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 EIF3BP55884 814 aaKnown RBP12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 LLGL1Q15334 1064 aa12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 ACCSLQ4AC99 568 aa12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 MSL1Q68DK7 614 aa12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 ARMC9Q7Z3E5 817 aa12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 ZFPM1Q8IX07 1006 aa12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 NGLY1Q96IV0 654 aa12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 CCDC113Q9H0I3 377 aa12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 FOXO6A8MYZ6 492 aa12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 MSH4O15457 936 aa12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 LMNB1P20700 586 aa12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 RPL13P26373 211 aaKnown RBP12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 HOXA13P31271 388 aaPredicted RBP12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 NF2P35240 595 aa12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 MAPK7Q13164 816 aa12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 RDH13Q8NBN7 331 aa12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 RPGRQ92834 1020 aaKnown RBP12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 STK33Q9BYT3 514 aa12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 CARD9Q9H257 536 aa12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 ABCF3Q9NUQ8 709 aa12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 BAIAP2L1Q9UHR4 511 aa12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 DBR1Q9UK59 544 aaKnown RBP12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 SUFUQ9UMX1 484 aa12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 ATP8B3O60423 1300 aa12.69□□□□□ -0.38
PDZRN3-203ENST00000462146 RGS16O15492 202 aaPredicted RBP12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 ATMINO43313 823 aaPredicted RBP12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 ATP6V1G2O95670 118 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 ANXA13P27216 316 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 NFIAQ12857 509 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 ZNF746Q6NUN9 644 aaPredicted RBP12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 RINT1Q6NUQ1 792 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 CERS5Q8N5B7 392 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 PRELID2Q8N945 189 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms