RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 SLC9A7Q96T83 725 aa11.23□□□□□ -0.61
RFX3-210ENST00000457373 FDXACB1Q9BRP7 624 aaPredicted RBP11.23□□□□□ -0.61
RFX3-210ENST00000457373 DHX33Q9H6R0 707 aaKnown RBP11.23□□□□□ -0.61
RFX3-210ENST00000457373 DDX19AQ9NUU7 478 aaKnown RBP11.23□□□□□ -0.61
RFX3-210ENST00000457373 DBR1Q9UK59 544 aaKnown RBP11.23□□□□□ -0.61
RFX3-210ENST00000457373 PADI3Q9ULW8 664 aa11.23□□□□□ -0.61
RFX3-210ENST00000457373 PPME1Q9Y570 386 aa11.23□□□□□ -0.61
RFX3-210ENST00000457373 SQORQ9Y6N5 450 aa11.23□□□□□ -0.61
RFX3-210ENST00000457373 ARHGEF35A5YM69 484 aa11.22□□□□□ -0.61
RFX3-210ENST00000457373 EFCAB14O75071 495 aa11.22□□□□□ -0.61
RFX3-210ENST00000457373 DGAT1O75907 488 aa11.22□□□□□ -0.61
RFX3-210ENST00000457373 UPP2O95045 317 aa11.22□□□□□ -0.61
RFX3-210ENST00000457373 AMHP03971 560 aa11.22□□□□□ -0.61
RFX3-210ENST00000457373 IBSPP21815 317 aaPredicted RBP11.22□□□□□ -0.61
RFX3-210ENST00000457373 MUTP22033 750 aa11.22□□□□□ -0.61
RFX3-210ENST00000457373 FGFR4P22455 802 aa11.22□□□□□ -0.61
RFX3-210ENST00000457373 STK38Q15208 465 aa11.22□□□□□ -0.61
RFX3-210ENST00000457373 ODR4Q5SWX8 454 aa11.22□□□□□ -0.61
RFX3-210ENST00000457373 CABP7Q86V35 215 aa11.22□□□□□ -0.61
RFX3-210ENST00000457373 FAM228AQ86W67 206 aa11.22□□□□□ -0.61
RFX3-210ENST00000457373 MYOCDQ8IZQ8 938 aa11.22□□□□□ -0.61
RFX3-210ENST00000457373 PHOSPHO2Q8TCD6 241 aa11.22□□□□□ -0.61
RFX3-210ENST00000457373 CDK5RAP3Q96JB5 506 aa11.22□□□□□ -0.61
RFX3-210ENST00000457373 NLRP4Q96MN2 994 aa11.22□□□□□ -0.61
RFX3-210ENST00000457373 ZNF396Q96N95 335 aaPredicted RBP11.22□□□□□ -0.61
RFX3-210ENST00000457373 ZBED2Q9BTP6 218 aa11.22□□□□□ -0.61
RFX3-210ENST00000457373 MMTAG2Q9BU76 263 aaKnown RBP11.22□□□□□ -0.61
RFX3-210ENST00000457373 PBX4Q9BYU1 374 aa11.22□□□□□ -0.61
RFX3-210ENST00000457373 GCOM2Q9BZD3 368 aaPredicted RBP11.22□□□□□ -0.61
RFX3-210ENST00000457373 ADAMTS10Q9H324 1103 aa11.22□□□□□ -0.61
RFX3-210ENST00000457373 ATP6V0A4Q9HBG4 840 aa11.22□□□□□ -0.61
RFX3-210ENST00000457373 ERVK-5Q9HDB9 667 aa11.22□□□□□ -0.61
RFX3-210ENST00000457373 XPNPEP1Q9NQW7 623 aa11.22□□□□□ -0.61
RFX3-210ENST00000457373 MSRAQ9UJ68 235 aa11.22□□□□□ -0.61
RFX3-210ENST00000457373 ST3GAL5Q9UNP4 418 aa11.22□□□□□ -0.61
RFX3-210ENST00000457373 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.21□□□□□ -0.61
RFX3-210ENST00000457373 ENPP3O14638 875 aa11.21□□□□□ -0.61
RFX3-210ENST00000457373 GPR182O15218 404 aa11.21□□□□□ -0.61
RFX3-210ENST00000457373 GAS2O43903 313 aaKnown RBP11.21□□□□□ -0.61
RFX3-210ENST00000457373 CSDE1O75534 798 aaKnown RBP11.21□□□□□ -0.61
RFX3-210ENST00000457373 SRGAP2CP0DJJ0 459 aa11.21□□□□□ -0.61
RFX3-210ENST00000457373 MYOGP15173 224 aa11.21□□□□□ -0.61
RFX3-210ENST00000457373 UBA7P41226 1012 aa11.21□□□□□ -0.61
RFX3-210ENST00000457373 CDC42EP1Q00587 391 aa11.21□□□□□ -0.61
RFX3-210ENST00000457373 GRB10Q13322 594 aa11.21□□□□□ -0.61
RFX3-210ENST00000457373 SPECC1Q5M775 1068 aa11.21□□□□□ -0.61
RFX3-210ENST00000457373 PADI6Q6TGC4 694 aa11.21□□□□□ -0.61
RFX3-210ENST00000457373 RTN4RL1Q86UN2 441 aaPredicted RBP11.21□□□□□ -0.61
RFX3-210ENST00000457373 HERC6Q8IVU3 1022 aa11.21□□□□□ -0.61
RFX3-210ENST00000457373 PRPF31Q8WWY3 499 aaKnown RBP11.21□□□□□ -0.61
RFX3-210ENST00000457373 PSPC1Q8WXF1 523 aaKnown RBP11.21□□□□□ -0.61
RFX3-210ENST00000457373 FAM161BQ96MY7 647 aa11.21□□□□□ -0.61
RFX3-210ENST00000457373 CLIC6Q96NY7 704 aa11.21□□□□□ -0.61
RFX3-210ENST00000457373 PNMA5Q96PV4 448 aa11.21□□□□□ -0.61
RFX3-210ENST00000457373 CSRNP2Q9H175 543 aa11.21□□□□□ -0.61
RFX3-210ENST00000457373 BHMT2Q9H2M3 363 aa11.21□□□□□ -0.61
RFX3-210ENST00000457373 NKX2-4Q9H2Z4 354 aa11.21□□□□□ -0.61
RFX3-210ENST00000457373 POLD4Q9HCU8 107 aa11.21□□□□□ -0.61
RFX3-210ENST00000457373 DNM3Q9UQ16 869 aa11.21□□□□□ -0.61
RFX3-210ENST00000457373 COL4A3BPQ9Y5P4 624 aa11.21□□□□□ -0.61
RFX3-210ENST00000457373 ASAP2O43150 1006 aa11.2□□□□□ -0.62
RFX3-210ENST00000457373 TLL1O43897 1013 aa11.2□□□□□ -0.62
RFX3-210ENST00000457373 EYA4O95677 639 aa11.2□□□□□ -0.62
RFX3-210ENST00000457373 SSBP05455 408 aaKnown RBP eCLIP11.2□□□□□ -0.62
RFX3-210ENST00000457373 DARSP14868 501 aaKnown RBP11.2□□□□□ -0.62
RFX3-210ENST00000457373 EIF4BP23588 611 aaKnown RBP11.2□□□□□ -0.62
RFX3-210ENST00000457373 DNAJB2P25686 324 aa11.2□□□□□ -0.62
RFX3-210ENST00000457373 LONP1P36776 959 aaKnown RBP11.2□□□□□ -0.62
RFX3-210ENST00000457373 LAMTOR4Q0VGL1 99 aa11.2□□□□□ -0.62
RFX3-210ENST00000457373 SLC39A14Q15043 492 aa11.2□□□□□ -0.62
RFX3-210ENST00000457373 SKIV2LQ15477 1246 aaKnown RBP11.2□□□□□ -0.62
RFX3-210ENST00000457373 RAB30Q15771 203 aa11.2□□□□□ -0.62
RFX3-210ENST00000457373 FAM102BQ5T8I3 360 aa11.2□□□□□ -0.62
RFX3-210ENST00000457373 Q7L0L9 218 aa11.2□□□□□ -0.62
RFX3-210ENST00000457373 KCNK18Q7Z418 384 aa11.2□□□□□ -0.62
RFX3-210ENST00000457373 ZNF410Q86VK4 478 aa11.2□□□□□ -0.62
RFX3-210ENST00000457373 ZNF710Q8N1W2 664 aa11.2□□□□□ -0.62
RFX3-210ENST00000457373 RNF149Q8NC42 400 aa11.2□□□□□ -0.62
RFX3-210ENST00000457373 RASSF8Q8NHQ8 419 aa11.2□□□□□ -0.62
RFX3-210ENST00000457373 ASAP3Q8TDY4 903 aa11.2□□□□□ -0.62
RFX3-210ENST00000457373 TIFAQ96CG3 184 aa11.2□□□□□ -0.62
RFX3-210ENST00000457373 CALML4Q96GE6 196 aa11.2□□□□□ -0.62
RFX3-210ENST00000457373 AK8Q96MA6 479 aa11.2□□□□□ -0.62
RFX3-210ENST00000457373 EPAS1Q99814 870 aa11.2□□□□□ -0.62
RFX3-210ENST00000457373 FTHL17Q9BXU8 183 aa11.2□□□□□ -0.62
RFX3-210ENST00000457373 INO80BQ9C086 356 aaPredicted RBP11.2□□□□□ -0.62
RFX3-210ENST00000457373 POLR3FQ9H1D9 316 aaPredicted RBP11.2□□□□□ -0.62
RFX3-210ENST00000457373 TMX1Q9H3N1 280 aa11.2□□□□□ -0.62
RFX3-210ENST00000457373 GPRC5CQ9NQ84 441 aa11.2□□□□□ -0.62
RFX3-210ENST00000457373 FBXO2Q9UK22 296 aaPredicted RBP11.2□□□□□ -0.62
RFX3-210ENST00000457373 YBX2Q9Y2T7 364 aaKnown RBP11.2□□□□□ -0.62
RFX3-210ENST00000457373 SRPRBQ9Y5M8 271 aaKnown RBP11.2□□□□□ -0.62
RFX3-210ENST00000457373 DENND3A2RUS2 1198 aa11.19□□□□□ -0.62
RFX3-210ENST00000457373 MGEA5O60502 916 aa11.19□□□□□ -0.62
RFX3-210ENST00000457373 BRD1O95696 1058 aa11.19□□□□□ -0.62
RFX3-210ENST00000457373 ZSCAN20P17040 1043 aaPredicted RBP11.19□□□□□ -0.62
RFX3-210ENST00000457373 CYP11B2P19099 503 aa11.19□□□□□ -0.62
RFX3-210ENST00000457373 SSTR3P32745 418 aaPredicted RBP11.19□□□□□ -0.62
RFX3-210ENST00000457373 ARL2P36404 184 aa11.19□□□□□ -0.62
RFX3-210ENST00000457373 NASPP49321 788 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms