RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 COX4I2Q96KJ9 171 aa11.53□□□□□ -0.56
LINC00342-202ENST00000448494 INPP4AQ96PE3 977 aaPredicted RBP11.53□□□□□ -0.56
LINC00342-202ENST00000448494 NOX5Q96PH1 765 aa11.53□□□□□ -0.56
LINC00342-202ENST00000448494 TXLNGYQ9BZA5 131 aa11.53□□□□□ -0.56
LINC00342-202ENST00000448494 USP29Q9HBJ7 922 aa11.53□□□□□ -0.56
LINC00342-202ENST00000448494 TELO2Q9Y4R8 837 aa11.53□□□□□ -0.56
LINC00342-202ENST00000448494 PDS5AQ29RF7 1337 aaKnown RBP11.53□□□□□ -0.56
LINC00342-202ENST00000448494 TET3O43151 1660 aa11.52□□□□□ -0.56
LINC00342-202ENST00000448494 NDC80O14777 642 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 ZNF263O14978 683 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 FGFR1OPO95684 399 aaKnown RBP11.52□□□□□ -0.57
LINC00342-202ENST00000448494 EPHB2P29323 1055 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 VPS41P49754 854 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 E2F2Q14209 437 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 LPIN1Q14693 890 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 SNRNP48Q6IEG0 339 aaKnown RBP11.52□□□□□ -0.57
LINC00342-202ENST00000448494 SATL1Q86VE3 508 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 DDX42Q86XP3 938 aaKnown RBP eCLIP11.52□□□□□ -0.57
LINC00342-202ENST00000448494 KBTBD2Q8IY47 623 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 USP38Q8NB14 1042 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 GPR101Q96P66 508 aaPredicted RBP11.52□□□□□ -0.57
LINC00342-202ENST00000448494 TTYH3Q9C0H2 523 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 MYLK2Q9H1R3 596 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.52□□□□□ -0.57
LINC00342-202ENST00000448494 ANGPTL2Q9UKU9 493 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 PNPLA7Q6ZV29 1317 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 SMIM23A6NLE4 172 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 TRIM64CA6NLI5 447 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 OPHN1O60890 802 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 TBX10O75333 385 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 PTPN4P29074 926 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 HSPA1LP34931 641 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 CCR3P51677 355 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 YARSP54577 528 aaKnown RBP11.52□□□□□ -0.57
LINC00342-202ENST00000448494 MGAT5Q09328 741 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 CERKLQ49MI3 558 aaPredicted RBP11.52□□□□□ -0.57
LINC00342-202ENST00000448494 BTNL9Q6UXG8 535 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 VPS37DQ86XT2 251 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 MYO1HQ8N1T3 1032 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 SPERTQ8NA61 448 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 ZNF507Q8TCN5 953 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 SEC14L1Q92503 715 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 CCDC85AQ96PX6 553 aaPredicted RBP11.52□□□□□ -0.57
LINC00342-202ENST00000448494 TMEM109Q9BVC6 243 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 NEUROG2Q9H2A3 272 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 C14orf93Q9H972 538 aaKnown RBP11.52□□□□□ -0.57
LINC00342-202ENST00000448494 PLGRKTQ9HBL7 147 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 SEC31BQ9NQW1 1179 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 ZMAT5Q9UDW3 170 aaKnown RBP11.52□□□□□ -0.57
LINC00342-202ENST00000448494 FAF1Q9UNN5 650 aaPredicted RBP11.52□□□□□ -0.57
LINC00342-202ENST00000448494 CTNND2Q9UQB3 1225 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 SLC30A1Q9Y6M5 507 aa11.52□□□□□ -0.57
LINC00342-202ENST00000448494 KIF1BO60333 1816 aa11.51□□□□□ -0.57
LINC00342-202ENST00000448494 ARHGAP10A1A4S6 786 aa11.51□□□□□ -0.57
LINC00342-202ENST00000448494 FBXO21O94952 628 aa11.51□□□□□ -0.57
LINC00342-202ENST00000448494 APOEP02649 317 aa11.51□□□□□ -0.57
LINC00342-202ENST00000448494 PTPREP23469 700 aa11.51□□□□□ -0.57
LINC00342-202ENST00000448494 CRABP2P29373 138 aa11.51□□□□□ -0.57
LINC00342-202ENST00000448494 RXRGP48443 463 aa11.51□□□□□ -0.57
LINC00342-202ENST00000448494 POLGP54098 1239 aaPredicted RBP11.51□□□□□ -0.57
LINC00342-202ENST00000448494 HNRNPDQ14103 355 aaKnown RBP11.51□□□□□ -0.57
LINC00342-202ENST00000448494 CTC1Q2NKJ3 1217 aa11.51□□□□□ -0.57
LINC00342-202ENST00000448494 TRIM71Q2Q1W2 868 aaKnown RBP11.51□□□□□ -0.57
LINC00342-202ENST00000448494 TNFAIP8L3Q5GJ75 292 aa11.51□□□□□ -0.57
LINC00342-202ENST00000448494 ARHGAP27Q6ZUM4 889 aa11.51□□□□□ -0.57
LINC00342-202ENST00000448494 UBE2Q1Q7Z7E8 422 aa11.51□□□□□ -0.57
LINC00342-202ENST00000448494 CCDC125Q86Z20 511 aa11.51□□□□□ -0.57
LINC00342-202ENST00000448494 GRAMD1CQ8IYS0 662 aa11.51□□□□□ -0.57
LINC00342-202ENST00000448494 ARHGAP24Q8N264 748 aa11.51□□□□□ -0.57
LINC00342-202ENST00000448494 DDHD1Q8NEL9 900 aa11.51□□□□□ -0.57
LINC00342-202ENST00000448494 ECSITQ9BQ95 431 aa11.51□□□□□ -0.57
LINC00342-202ENST00000448494 TUT1Q9H6E5 874 aaKnown RBP11.51□□□□□ -0.57
LINC00342-202ENST00000448494 HAO1Q9UJM8 370 aa11.51□□□□□ -0.57
LINC00342-202ENST00000448494 SATB2Q9UPW6 733 aa11.51□□□□□ -0.57
LINC00342-202ENST00000448494 A0A1W2PQJ5 194 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 TEX28O15482 410 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 AP1G1O43747 822 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 UBL4AP11441 157 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 GRIA2P42262 883 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 NEK3P51956 506 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 NAA20P61599 178 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 TMC4Q7Z404 712 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 PYROXD1Q8WU10 500 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 APPBP2Q92624 585 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 STMN2Q93045 179 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 PRICKLE1Q96MT3 831 aaPredicted RBP11.5□□□□□ -0.57
LINC00342-202ENST00000448494 SELENONQ9NZV5 590 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 DMTF1Q9Y222 760 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 NEXMIFQ5QGS0 1516 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 FUOMA2VDF0 154 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 RNASEH1O60930 286 aaKnown RBP11.5□□□□□ -0.57
LINC00342-202ENST00000448494 DCTN3O75935 186 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 KRT36O76013 467 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 TARSP26639 723 aaKnown RBP11.5□□□□□ -0.57
LINC00342-202ENST00000448494 HNRNPH3P31942 346 aaKnown RBP11.5□□□□□ -0.57
LINC00342-202ENST00000448494 PHBP35232 272 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 COL15A1P39059 1388 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 RPL5P46777 297 aaKnown RBP11.5□□□□□ -0.57
LINC00342-202ENST00000448494 DNM2P50570 870 aa11.5□□□□□ -0.57
LINC00342-202ENST00000448494 RPL26P61254 145 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms