RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 MAGOHP61326 146 aaKnown RBP5.32□□□□□ -1.56
SMAD4-202ENST00000398417 PLCB3Q01970 1234 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 RINT1Q6NUQ1 792 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 TADA2BQ86TJ2 420 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 EFCAB13Q8IY85 973 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 THOC1Q96FV9 657 aaKnown RBP5.32□□□□□ -1.56
SMAD4-202ENST00000398417 KMT5AQ9NQR1 393 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 MON2Q7Z3U7 1717 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 RGS16O15492 202 aaPredicted RBP5.32□□□□□ -1.56
SMAD4-202ENST00000398417 NOL4O94818 638 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 HDLBPQ00341 1268 aaKnown RBP5.32□□□□□ -1.56
SMAD4-202ENST00000398417 Q4G0T1 1027 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 ZBTB33Q86T24 672 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 WHAMMQ8TF30 809 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 SYN2Q92777 582 aaPredicted RBP5.32□□□□□ -1.56
SMAD4-202ENST00000398417 VPS37BQ9H9H4 285 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 KCNMB3Q9NPA1 279 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 SAMD15Q9P1V8 674 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 RGPD1P0DJD0 1748 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 IGKV6D-41A0A0C4DH26 115 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 MEIS2O14770 477 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 CCND1P24385 295 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 HSPA9P38646 679 aaKnown RBP5.32□□□□□ -1.56
SMAD4-202ENST00000398417 VAMP7P51809 220 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 EDRF1Q3B7T1 1238 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 CCDC38Q502W7 563 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 LRIG3Q6UXM1 1119 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 POP1Q99575 1024 aaKnown RBP5.32□□□□□ -1.56
SMAD4-202ENST00000398417 ELAC2Q9BQ52 826 aaKnown RBP5.32□□□□□ -1.56
SMAD4-202ENST00000398417 LXNQ9BS40 222 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 ASTN1O14525 1302 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 PPP1R37O75864 691 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 SLITRK3O94933 977 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 SPATA31C1P0DKV0 1188 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 PDE6CP51160 858 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 ACTN3Q08043 901 aaPredicted RBP5.32□□□□□ -1.56
SMAD4-202ENST00000398417 DGKZQ13574 1117 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 RRP1BQ14684 758 aaKnown RBP5.32□□□□□ -1.56
SMAD4-202ENST00000398417 WDR44Q5JSH3 913 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 ARHGEF16Q5VV41 709 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 PLA2G4FQ68DD2 849 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 CACNA2D3Q8IZS8 1091 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 KAT5Q92993 513 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 GLIS2Q9BZE0 524 aaPredicted RBP5.32□□□□□ -1.56
SMAD4-202ENST00000398417 RAB17Q9H0T7 212 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 TMEM150BA6NC51 233 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 LSM1O15116 133 aaKnown RBP5.32□□□□□ -1.56
SMAD4-202ENST00000398417 FLT3P36888 993 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 HSD17B3P37058 310 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 ADCY8P40145 1251 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 MXI1P50539 228 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 DLG4P78352 724 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 E2F5Q15329 346 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 C2CD6Q53TS8 623 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 ARSHQ5FYA8 562 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 ZNF365Q70YC5 407 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 ZNF668Q96K58 619 aaPredicted RBP5.32□□□□□ -1.56
SMAD4-202ENST00000398417 WDR18Q9BV38 432 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 KCTD10Q9H3F6 313 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 GPRC5CQ9NQ84 441 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 CNOT8Q9UFF9 292 aaKnown RBP5.32□□□□□ -1.56
SMAD4-202ENST00000398417 PITPNM2Q9BZ72 1349 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 CCDC188H7C350 402 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 ENTPD3O75355 529 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 TNNI1P19237 187 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 FMO5P49326 533 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 NLRX1Q86UT6 975 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 FAM160B2Q86V87 743 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 PACS2Q86VP3 889 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 JAMLQ86YT9 394 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 TPCN2Q8NHX9 752 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 RFFLQ8WZ73 363 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 DDX3YO15523 660 aaKnown RBP5.31□□□□□ -1.56
SMAD4-202ENST00000398417 ECEL1O95672 775 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 HNRNPH3P31942 346 aaKnown RBP5.31□□□□□ -1.56
SMAD4-202ENST00000398417 CORO7P57737 925 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 GPC5P78333 572 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 GABPAQ06546 454 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 ZCWPW2Q504Y3 356 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 PNMA8AQ86V59 439 aaPredicted RBP5.31□□□□□ -1.56
SMAD4-202ENST00000398417 CEP170P1Q96L14 293 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 FAM213AQ9BRX8 229 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 POLR3CQ9BUI4 534 aaPredicted RBP5.31□□□□□ -1.56
SMAD4-202ENST00000398417 ADAM33Q9BZ11 813 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 NAGPAQ9UK23 515 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 USP20Q9Y2K6 914 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 CENPFP49454 3210 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 XRN1Q8IZH2 1706 aaKnown RBP5.31□□□□□ -1.56
SMAD4-202ENST00000398417 TOPAZ1Q8N9V7 1692 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 TGFB1I1O43294 461 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 EDIL3O43854 480 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 COMTP21964 271 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 FGFR4P22455 802 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 STAT2P52630 851 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 COBLL1Q53SF7 1204 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 KDM7AQ6ZMT4 941 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 HAUS6Q7Z4H7 955 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 NSRP1Q9H0G5 558 aaKnown RBP5.31□□□□□ -1.56
SMAD4-202ENST00000398417 TMEM206Q9H813 350 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 SIX2Q9NPC8 291 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms