RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 BBOX1O75936 387 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 SRGAP2CP0DJJ0 459 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 ELF1P32519 619 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 SGMS1Q86VZ5 419 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 NDUFAF2Q8N183 169 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 ZNF473Q8WTR7 871 aaKnown RBP10.2□□□□□ -0.78
SNX1-202ENST00000380285 SKA2Q8WVK7 121 aaPredicted RBP10.2□□□□□ -0.78
SNX1-202ENST00000380285 ASPSCR1Q9BZE9 553 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 NDUFA13Q9P0J0 144 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 H0Y3Z8 333 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 SPAG6O75602 509 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 FAM193BQ96PV7 902 aaPredicted RBP10.2□□□□□ -0.78
SNX1-202ENST00000380285 TIPINQ9BVW5 301 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 RPF1Q9H9Y2 349 aaKnown RBP10.2□□□□□ -0.78
SNX1-202ENST00000380285 NLRP1Q9C000 1473 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 PPIP5K2O43314 1243 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 ARID5BQ14865 1188 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 NUDCD3Q8IVD9 361 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 RNF169Q8NCN4 708 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 TTC8Q8TAM2 541 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 PBXIP1Q96AQ6 731 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 FAM161BQ96MY7 647 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 STRBPQ96SI9 672 aaKnown RBP10.2□□□□□ -0.78
SNX1-202ENST00000380285 WARS2Q9UGM6 360 aaKnown RBP10.2□□□□□ -0.78
SNX1-202ENST00000380285 SEPT3Q9UH03 358 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 DTNBO60941 627 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 TFAMQ00059 246 aaKnown RBP10.19□□□□□ -0.78
SNX1-202ENST00000380285 TNFAIP2Q03169 654 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 CUL3Q13618 768 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 NFRKBQ6P4R8 1299 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 RSRC2Q7L4I2 434 aaKnown RBP10.19□□□□□ -0.78
SNX1-202ENST00000380285 LCORLQ8N3X6 602 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 RASGRP4Q8TDF6 673 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 STX18Q9P2W9 335 aaKnown RBP10.19□□□□□ -0.78
SNX1-202ENST00000380285 PI4KBQ9UBF8 816 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 BLOC1S6Q9UL45 172 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 KDM6BO15054 1643 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 C16orf96A6NNT2 1141 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 SRGAP2O75044 1071 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 TMCC1O94876 653 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 ZSCAN20P17040 1043 aaPredicted RBP10.19□□□□□ -0.78
SNX1-202ENST00000380285 ATP2C1P98194 919 aaPredicted RBP10.19□□□□□ -0.78
SNX1-202ENST00000380285 BIRC2Q13490 618 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 FAM149B1Q96BN6 582 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 TRIM62Q9BVG3 475 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 CXorf56Q9H5V9 222 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 HEG1Q9ULI3 1381 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 A0A1W2PQJ5 194 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 TTC26A0AVF1 554 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 H3BRJ5 948 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 KIAA0391O15091 583 aaKnown RBP10.19□□□□□ -0.78
SNX1-202ENST00000380285 PYGLP06737 847 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 HSPA13P48723 471 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 GYS2P54840 703 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 GFPT1Q06210 699 aaPredicted RBP10.19□□□□□ -0.78
SNX1-202ENST00000380285 TRIP13Q15645 432 aaPredicted RBP10.19□□□□□ -0.78
SNX1-202ENST00000380285 CNGA3Q16281 694 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 TRIM59Q8IWR1 403 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 FAM167AQ96KS9 214 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 NUP85Q9BW27 656 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 ANO3Q9BYT9 981 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 TBC1D23Q9NUY8 699 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 GDAQ9Y2T3 454 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 USP42Q9H9J4 1324 aaKnown RBP10.19□□□□□ -0.78
SNX1-202ENST00000380285 PSMD14O00487 310 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 COBLO75128 1261 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 HSPA2P54652 639 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 CCNA1P78396 465 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 ITPRIPL1Q6GPH6 555 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 FAM47EQ6ZV65 393 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 ZNF710Q8N1W2 664 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 CNKSR1Q969H4 720 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 H0Y626 953 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 TRIM16O95361 564 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 CORO7P57737 925 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 CDKL3Q8IVW4 592 aaPredicted RBP10.19□□□□□ -0.78
SNX1-202ENST00000380285 FBXL5Q9UKA1 691 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 GJA3Q9Y6H8 435 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 RNF103-CHMP3A0A140T963 221 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 KCNQ3O43525 872 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 E2F6O75461 281 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 MED21Q13503 144 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 ATL2Q8NHH9 583 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 PKD2L2Q9NZM6 624 aa10.19□□□□□ -0.78
SNX1-202ENST00000380285 A0A1B0GW55 424 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 FAM107AO95990 144 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 DUX4L2P0CJ85 424 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 DUX4L3P0CJ86 424 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 DUX4L4P0CJ87 422 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 DUX4L5P0CJ88 424 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 DUX4L6P0CJ89 424 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 DUX4L7P0CJ90 424 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 YWHAHQ04917 246 aaPredicted RBP10.18□□□□□ -0.78
SNX1-202ENST00000380285 INPP5AQ14642 412 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 KYAT1Q16773 422 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 DUX4Q9UBX2 424 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 HECW2Q9P2P5 1572 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 PALLDQ8WX93 1383 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 K7ERI5 159 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 ITIH2P19823 946 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms