RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 TRIM9Q9C026 710 aa9□□□□□ -0.97
VPS36-201ENST00000378060 POTEMA6NI47 508 aa9□□□□□ -0.97
VPS36-201ENST00000378060 FOXP2O15409 715 aa9□□□□□ -0.97
VPS36-201ENST00000378060 MAP3K7O43318 606 aa9□□□□□ -0.97
VPS36-201ENST00000378060 XPOTO43592 962 aaKnown RBP9□□□□□ -0.97
VPS36-201ENST00000378060 TJP3O95049 919 aa9□□□□□ -0.97
VPS36-201ENST00000378060 PMS2P54278 862 aa9□□□□□ -0.97
VPS36-201ENST00000378060 DPYDQ12882 1025 aa9□□□□□ -0.97
VPS36-201ENST00000378060 RCN2Q14257 317 aa9□□□□□ -0.97
VPS36-201ENST00000378060 SLFN12LQ6IEE8 588 aa9□□□□□ -0.97
VPS36-201ENST00000378060 TMEM179Q6ZVK1 233 aa9□□□□□ -0.97
VPS36-201ENST00000378060 METTL13Q8N6R0 699 aa9□□□□□ -0.97
VPS36-201ENST00000378060 XXYLT1Q8NBI6 393 aa9□□□□□ -0.97
VPS36-201ENST00000378060 GSDMBQ8TAX9 411 aa9□□□□□ -0.97
VPS36-201ENST00000378060 GRAMD1AQ96CP6 724 aa9□□□□□ -0.97
VPS36-201ENST00000378060 HVCN1Q96D96 273 aa9□□□□□ -0.97
VPS36-201ENST00000378060 CHMP6Q96FZ7 201 aa9□□□□□ -0.97
VPS36-201ENST00000378060 SCYL1Q96KG9 808 aa9□□□□□ -0.97
VPS36-201ENST00000378060 EFHD1Q9BUP0 239 aa9□□□□□ -0.97
VPS36-201ENST00000378060 IRX2Q9BZI1 471 aaPredicted RBP9□□□□□ -0.97
VPS36-201ENST00000378060 KIAA1586Q9HCI6 787 aa9□□□□□ -0.97
VPS36-201ENST00000378060 TTLL3Q9Y4R7 772 aa9□□□□□ -0.97
VPS36-201ENST00000378060 C10orf71Q711Q0 1435 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 LRP5O75197 1615 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 TCP10L2B9ZVM9 353 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 SOCS7O14512 581 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 MEFVO15553 781 aaPredicted RBP8.99□□□□□ -0.97
VPS36-201ENST00000378060 KRT37O76014 449 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 RHOBTB3O94955 611 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 MRPS25P82663 173 aaKnown RBP8.99□□□□□ -0.97
VPS36-201ENST00000378060 FMR1Q06787 632 aaKnown RBP eCLIP8.99□□□□□ -0.97
VPS36-201ENST00000378060 SFR1Q86XK3 245 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 SPICE1Q8N0Z3 855 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 SLC16A10Q8TF71 515 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 RFFLQ8WZ73 363 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 NCAPGQ9BPX3 1015 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 TRIM55Q9BYV6 548 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 COA1Q9GZY4 146 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 KIAA1551Q9HCM1 1747 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 PPEF1O14829 653 aaPredicted RBP8.99□□□□□ -0.97
VPS36-201ENST00000378060 RGL2O15211 777 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 ACTN1P12814 892 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 KCNA3P22001 575 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 FXR1P51114 621 aaKnown RBP eCLIP8.99□□□□□ -0.97
VPS36-201ENST00000378060 BASP1P80723 227 aaKnown RBP8.99□□□□□ -0.97
VPS36-201ENST00000378060 COG7P83436 770 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 ADCY1Q08828 1119 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 BYSLQ13895 437 aaKnown RBP8.99□□□□□ -0.97
VPS36-201ENST00000378060 BBS9Q3SYG4 887 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 MUM1L1Q5H9M0 696 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 STAG2Q8N3U4 1231 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 CHP1Q99653 195 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 PHF20Q9BVI0 1012 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 DDX47Q9H0S4 455 aaKnown RBP8.99□□□□□ -0.97
VPS36-201ENST00000378060 STOML1Q9UBI4 398 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 CNOT8Q9UFF9 292 aaKnown RBP8.99□□□□□ -0.97
VPS36-201ENST00000378060 SEPT9Q9UHD8 586 aaPredicted RBP8.99□□□□□ -0.97
VPS36-201ENST00000378060 MINPP1Q9UNW1 487 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 PSMD14O00487 310 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 PFDN6O15212 129 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 ZWINTO95229 277 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 LDHAP00338 332 aaKnown RBP8.99□□□□□ -0.97
VPS36-201ENST00000378060 MKRN3Q13064 507 aaKnown RBP8.99□□□□□ -0.97
VPS36-201ENST00000378060 SCARF1Q14162 830 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 FRMD5Q7Z6J6 570 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 RNF168Q8IYW5 571 aaPredicted RBP8.99□□□□□ -0.97
VPS36-201ENST00000378060 GDAP1Q8TB36 358 aa8.99□□□□□ -0.97
VPS36-201ENST00000378060 M0QZ92 97 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 PRDX5P30044 214 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 KPNA2P52292 529 aaKnown RBP8.98□□□□□ -0.97
VPS36-201ENST00000378060 MMEL1Q495T6 779 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 ANKRD20A4Q4UJ75 823 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 ANKRD20A8PQ5CZ79 823 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 ANKRD20A2Q5SQ80 823 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 ANKRD20A1Q5TYW2 823 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 KRT39Q6A163 491 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 PCGF5Q86SE9 256 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 TXNRD3Q86VQ6 643 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 GSPT2Q8IYD1 628 aaKnown RBP8.98□□□□□ -0.97
VPS36-201ENST00000378060 SYT2Q8N9I0 419 aaPredicted RBP8.98□□□□□ -0.97
VPS36-201ENST00000378060 NEDD1Q8NHV4 660 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 FHDC1Q9C0D6 1143 aaPredicted RBP8.98□□□□□ -0.97
VPS36-201ENST00000378060 TMEM60Q9H2L4 133 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 FAM96AQ9H5X1 160 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 CLEC11AQ9Y240 323 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 NOC2LQ9Y3T9 749 aaKnown RBP8.98□□□□□ -0.97
VPS36-201ENST00000378060 ESYT3A0FGR9 886 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 RASA4BC9J798 803 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 GOLGA8SH3BPF8 625 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 RASA4O43374 803 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 SH3BP5O60239 455 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 CYP2D6P10635 497 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 FDPSP14324 419 aaKnown RBP8.98□□□□□ -0.97
VPS36-201ENST00000378060 USP11P51784 963 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 ARL4CP56559 192 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 SLC18A3Q16572 532 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 ANKRD40Q6AI12 368 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 DARS2Q6PI48 645 aaKnown RBP8.98□□□□□ -0.97
VPS36-201ENST00000378060 LRIG3Q6UXM1 1119 aa8.98□□□□□ -0.97
VPS36-201ENST00000378060 RAD9BQ6WBX8 426 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms