RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 SLC8A2Q9UPR5 921 aa18.35■□□□□ 0.53
MCF2L-203ENST00000375604 ATICP31939 592 aa18.35■□□□□ 0.53
MCF2L-203ENST00000375604 ZCWPW1Q9H0M4 648 aa18.35■□□□□ 0.53
MCF2L-203ENST00000375604 ZNF521Q96K83 1311 aa18.35■□□□□ 0.53
MCF2L-203ENST00000375604 HMBSP08397 361 aa18.35■□□□□ 0.53
MCF2L-203ENST00000375604 GNAT1P11488 350 aa18.35■□□□□ 0.53
MCF2L-203ENST00000375604 NFRKBQ6P4R8 1299 aa18.35■□□□□ 0.53
MCF2L-203ENST00000375604 FMO2Q99518 471 aa18.35■□□□□ 0.53
MCF2L-203ENST00000375604 ABHD10Q9NUJ1 306 aa18.35■□□□□ 0.53
MCF2L-203ENST00000375604 JRKLQ9Y4A0 524 aa18.35■□□□□ 0.53
MCF2L-203ENST00000375604 GLI2P10070 1586 aa18.35■□□□□ 0.53
MCF2L-203ENST00000375604 RABGGTAQ92696 567 aa18.35■□□□□ 0.53
MCF2L-203ENST00000375604 BARHL2Q9NY43 387 aa18.35■□□□□ 0.53
MCF2L-203ENST00000375604 NRKQ7Z2Y5 1582 aa18.35■□□□□ 0.53
MCF2L-203ENST00000375604 RASGRF2O14827 1237 aa18.34■□□□□ 0.53
MCF2L-203ENST00000375604 CPB1P15086 417 aa18.34■□□□□ 0.53
MCF2L-203ENST00000375604 TSPY1Q01534 308 aa18.34■□□□□ 0.53
MCF2L-203ENST00000375604 APOBEC3FQ8IUX4 373 aaKnown RBP18.34■□□□□ 0.53
MCF2L-203ENST00000375604 PHLPP2Q6ZVD8 1323 aa18.34■□□□□ 0.53
MCF2L-203ENST00000375604 AGR3Q8TD06 166 aa18.34■□□□□ 0.53
MCF2L-203ENST00000375604 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.34■□□□□ 0.532e-6■■■■■ 55.9
MCF2L-203ENST00000375604 ARL6IP4Q66PJ3 421 aaKnown RBP18.34■□□□□ 0.53
MCF2L-203ENST00000375604 ZNF467Q7Z7K2 595 aaPredicted RBP18.34■□□□□ 0.53
MCF2L-203ENST00000375604 RASSF3Q86WH2 238 aa18.34■□□□□ 0.53
MCF2L-203ENST00000375604 BEST2Q8NFU1 509 aa18.34■□□□□ 0.53
MCF2L-203ENST00000375604 CYTH2Q99418 400 aa18.34■□□□□ 0.53
MCF2L-203ENST00000375604 CCDC78A2IDD5 438 aa18.34■□□□□ 0.53
MCF2L-203ENST00000375604 DPYSL4O14531 572 aa18.34■□□□□ 0.53
MCF2L-203ENST00000375604 TEX33O43247 280 aa18.34■□□□□ 0.53
MCF2L-203ENST00000375604 IRF1P10914 325 aa18.34■□□□□ 0.53
MCF2L-203ENST00000375604 KCNA1Q09470 495 aa18.34■□□□□ 0.53
MCF2L-203ENST00000375604 ART3Q13508 389 aa18.34■□□□□ 0.53
MCF2L-203ENST00000375604 SURF1Q15526 300 aa18.34■□□□□ 0.53
MCF2L-203ENST00000375604 PHLDB3Q6NSJ2 640 aa18.34■□□□□ 0.53
MCF2L-203ENST00000375604 LDHDQ86WU2 507 aa18.34■□□□□ 0.53
MCF2L-203ENST00000375604 XXYLT1Q8NBI6 393 aa18.34■□□□□ 0.53
MCF2L-203ENST00000375604 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.34■□□□□ 0.53
MCF2L-203ENST00000375604 KRT82Q9NSB4 513 aa18.34■□□□□ 0.53
MCF2L-203ENST00000375604 EVI5O60447 810 aa18.34■□□□□ 0.53
MCF2L-203ENST00000375604 ESRRBO95718 433 aa18.34■□□□□ 0.53
MCF2L-203ENST00000375604 LDHAP00338 332 aaKnown RBP18.34■□□□□ 0.53
MCF2L-203ENST00000375604 UBE2Q2Q8WVN8 375 aa18.34■□□□□ 0.53
MCF2L-203ENST00000375604 ANKRD65E5RJM6 399 aa18.33■□□□□ 0.53
MCF2L-203ENST00000375604 MXD4Q14582 209 aaPredicted RBP18.33■□□□□ 0.53
MCF2L-203ENST00000375604 PODNQ7Z5L7 613 aa18.33■□□□□ 0.53
MCF2L-203ENST00000375604 TTC1Q99614 292 aa18.33■□□□□ 0.53
MCF2L-203ENST00000375604 TJP3O95049 919 aa18.33■□□□□ 0.53
MCF2L-203ENST00000375604 CIITAP33076 1130 aa18.33■□□□□ 0.53
MCF2L-203ENST00000375604 KNOP1Q1ED39 458 aaKnown RBP18.33■□□□□ 0.53
MCF2L-203ENST00000375604 PIP4K2CQ8TBX8 421 aa18.33■□□□□ 0.53
MCF2L-203ENST00000375604 CNOT7Q9UIV1 285 aaKnown RBP18.33■□□□□ 0.53
MCF2L-203ENST00000375604 PTCH1Q13635 1447 aa18.33■□□□□ 0.53
MCF2L-203ENST00000375604 A0A0G2JND7 137 aa18.33■□□□□ 0.52
MCF2L-203ENST00000375604 QARSP47897 775 aaKnown RBP18.33■□□□□ 0.52
MCF2L-203ENST00000375604 DRAP1Q14919 205 aaPredicted RBP18.33■□□□□ 0.52
MCF2L-203ENST00000375604 QRICH2Q9H0J4 1663 aa18.33■□□□□ 0.52
MCF2L-203ENST00000375604 ESYT3A0FGR9 886 aa18.33■□□□□ 0.52
MCF2L-203ENST00000375604 A8MXQ7 604 aa18.33■□□□□ 0.52
MCF2L-203ENST00000375604 SNCBQ16143 134 aa18.33■□□□□ 0.52
MCF2L-203ENST00000375604 TNS3Q68CZ2 1445 aa18.33■□□□□ 0.52
MCF2L-203ENST00000375604 OCRLQ01968 901 aa18.33■□□□□ 0.52
MCF2L-203ENST00000375604 TBC1D16Q8TBP0 767 aa18.33■□□□□ 0.52
MCF2L-203ENST00000375604 PIN4Q9Y237 131 aaKnown RBP18.33■□□□□ 0.52
MCF2L-203ENST00000375604 POLRMTO00411 1230 aaKnown RBP18.32■□□□□ 0.52
MCF2L-203ENST00000375604 YWHABP31946 246 aaKnown RBP18.32■□□□□ 0.52
MCF2L-203ENST00000375604 PSMC1P62191 440 aaKnown RBP18.32■□□□□ 0.52
MCF2L-203ENST00000375604 POU5F1BQ06416 359 aa18.32■□□□□ 0.52
MCF2L-203ENST00000375604 TMEM259Q4ZIN3 620 aa18.32■□□□□ 0.52
MCF2L-203ENST00000375604 PSPC1Q8WXF1 523 aaKnown RBP18.32■□□□□ 0.52
MCF2L-203ENST00000375604 PANX2Q96RD6 677 aa18.32■□□□□ 0.52
MCF2L-203ENST00000375604 EDEM3Q9BZQ6 932 aa18.32■□□□□ 0.52
MCF2L-203ENST00000375604 GRIK1P39086 918 aa18.32■□□□□ 0.52
MCF2L-203ENST00000375604 DRP2Q13474 957 aa18.32■□□□□ 0.52
MCF2L-203ENST00000375604 MAP3K21Q5TCX8 1036 aa18.32■□□□□ 0.52
MCF2L-203ENST00000375604 CENPUQ71F23 418 aa18.32■□□□□ 0.52
MCF2L-203ENST00000375604 RNF149Q8NC42 400 aa18.32■□□□□ 0.52
MCF2L-203ENST00000375604 ZNF564Q8TBZ8 553 aaPredicted RBP18.32■□□□□ 0.52
MCF2L-203ENST00000375604 RAET1EQ8TD07 263 aa18.32■□□□□ 0.52
MCF2L-203ENST00000375604 VPS11Q9H270 941 aa18.32■□□□□ 0.52
MCF2L-203ENST00000375604 ACAD9Q9H845 621 aa18.32■□□□□ 0.52
MCF2L-203ENST00000375604 SUGT1Q9Y2Z0 365 aa18.32■□□□□ 0.52
MCF2L-203ENST00000375604 USP27XA6NNY8 438 aa18.32■□□□□ 0.52
MCF2L-203ENST00000375604 PEX19P40855 299 aa18.32■□□□□ 0.52
MCF2L-203ENST00000375604 RBAKQ9NYW8 714 aaPredicted RBP18.32■□□□□ 0.52
MCF2L-203ENST00000375604 GTSE1Q9NYZ3 720 aa18.32■□□□□ 0.52
MCF2L-203ENST00000375604 CLCN6P51797 869 aa18.32■□□□□ 0.52
MCF2L-203ENST00000375604 EFCAB13Q8IY85 973 aa18.32■□□□□ 0.52
MCF2L-203ENST00000375604 C1orf54Q8WWF1 131 aa18.32■□□□□ 0.52
MCF2L-203ENST00000375604 CEP72Q9P209 647 aa18.32■□□□□ 0.52
MCF2L-203ENST00000375604 ACOT2P49753 483 aa18.31■□□□□ 0.52
MCF2L-203ENST00000375604 PHEXP78562 749 aa18.31■□□□□ 0.52
MCF2L-203ENST00000375604 TNFAIP2Q03169 654 aa18.31■□□□□ 0.52
MCF2L-203ENST00000375604 ZNF507Q8TCN5 953 aa18.31■□□□□ 0.52
MCF2L-203ENST00000375604 MYO3BQ8WXR4 1341 aa18.31■□□□□ 0.52
MCF2L-203ENST00000375604 HSPA4LO95757 839 aa18.31■□□□□ 0.52
MCF2L-203ENST00000375604 FTLP02792 175 aaPredicted RBP18.31■□□□□ 0.52
MCF2L-203ENST00000375604 P4HBP07237 508 aaKnown RBP18.31■□□□□ 0.52
MCF2L-203ENST00000375604 TXNP10599 105 aaKnown RBP18.31■□□□□ 0.52
MCF2L-203ENST00000375604 MFSD14CQ5VZR4 134 aa18.31■□□□□ 0.52
MCF2L-203ENST00000375604 PDCD7Q8N8D1 485 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms