RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 ZNF720Q7Z2F6 126 aa13.21□□□□□ -0.29
HMGCL-202ENST00000374487 FAM186BQ8IYM0 893 aa13.21□□□□□ -0.29
HMGCL-202ENST00000374487 NEK9Q8TD19 979 aa13.21□□□□□ -0.29
HMGCL-202ENST00000374487 CLEC4DQ8WXI8 215 aa13.21□□□□□ -0.29
HMGCL-202ENST00000374487 ST7Q9NRC1 585 aa13.21□□□□□ -0.29
HMGCL-202ENST00000374487 RNF216Q9NWF9 866 aaPredicted RBP13.21□□□□□ -0.29
HMGCL-202ENST00000374487 COL20A1Q9P218 1284 aa13.21□□□□□ -0.29
HMGCL-202ENST00000374487 ADAMTS1Q9UHI8 967 aa13.21□□□□□ -0.29
HMGCL-202ENST00000374487 SLC45A1Q9Y2W3 748 aa13.21□□□□□ -0.29
HMGCL-202ENST00000374487 BUB1O43683 1085 aa13.21□□□□□ -0.3
HMGCL-202ENST00000374487 CNMDO75829 334 aa13.21□□□□□ -0.3
HMGCL-202ENST00000374487 OSBPP22059 807 aa13.21□□□□□ -0.3
HMGCL-202ENST00000374487 MCM3P25205 808 aa13.21□□□□□ -0.3
HMGCL-202ENST00000374487 PSMC4P43686 418 aa13.21□□□□□ -0.3
HMGCL-202ENST00000374487 USP14P54578 494 aa13.21□□□□□ -0.3
HMGCL-202ENST00000374487 VSNL1P62760 191 aa13.21□□□□□ -0.3
HMGCL-202ENST00000374487 BEND6Q5SZJ8 279 aaPredicted RBP13.21□□□□□ -0.3
HMGCL-202ENST00000374487 KLHDC7AQ5VTJ3 777 aa13.21□□□□□ -0.3
HMGCL-202ENST00000374487 B3GNT9Q6UX72 402 aa13.21□□□□□ -0.3
HMGCL-202ENST00000374487 HDXQ7Z353 690 aa13.21□□□□□ -0.3
HMGCL-202ENST00000374487 CTU1Q7Z7A3 348 aaKnown RBP13.21□□□□□ -0.3
HMGCL-202ENST00000374487 SYCP3Q8IZU3 236 aa13.21□□□□□ -0.3
HMGCL-202ENST00000374487 SLC38A10Q9HBR0 1119 aa13.21□□□□□ -0.3
HMGCL-202ENST00000374487 ABCB6Q9NP58 842 aa13.21□□□□□ -0.3
HMGCL-202ENST00000374487 BTBD7Q9P203 1132 aa13.21□□□□□ -0.3
HMGCL-202ENST00000374487 FRMD4BQ9Y2L6 1034 aa13.21□□□□□ -0.3
HMGCL-202ENST00000374487 SPDYE16A6NNV3 312 aaPredicted RBP13.2□□□□□ -0.3
HMGCL-202ENST00000374487 P4HBP07237 508 aaKnown RBP13.2□□□□□ -0.3
HMGCL-202ENST00000374487 PRLRP16471 622 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 TCP1P17987 556 aaKnown RBP13.2□□□□□ -0.3
HMGCL-202ENST00000374487 GUCY2CP25092 1073 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 ZNF131P52739 623 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 DMTNQ08495 405 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 MTMR1Q13613 665 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 SMC1AQ14683 1233 aaKnown RBP13.2□□□□□ -0.3
HMGCL-202ENST00000374487 TKFCQ3LXA3 575 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 PCNX4Q63HM2 1172 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 CCDC70Q6NSX1 233 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 NIPA1Q7RTP0 329 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 KSR1Q8IVT5 923 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 SLC35C1Q96A29 364 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 GCNT4Q9P109 453 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 GABRQQ9UN88 632 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 BZW2Q9Y6E2 419 aaKnown RBP13.2□□□□□ -0.3
HMGCL-202ENST00000374487 RPTORQ8N122 1335 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 A0A087X0T9 212 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 ZBED4O75132 1171 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 HIP1RO75146 1068 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 FAM228BP0C875 321 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 EIF2AK2P19525 551 aaKnown RBP13.2□□□□□ -0.3
HMGCL-202ENST00000374487 KIAA0753Q2KHM9 967 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 MUM1L1Q5H9M0 696 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 CCDC181Q5TID7 509 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 WDR93Q6P2C0 686 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 PADI6Q6TGC4 694 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 MAEAQ7L5Y9 396 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 IL31RAQ8NI17 732 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 ATG4CQ96DT6 458 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 CCDC43Q96MW1 224 aaKnown RBP13.2□□□□□ -0.3
HMGCL-202ENST00000374487 PORCNQ9H237 461 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 IKZF4Q9H2S9 585 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 EFCC1Q9HA90 598 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 MAP3K20Q9NYL2 800 aaKnown RBP13.2□□□□□ -0.3
HMGCL-202ENST00000374487 TCEAL9Q9UHQ7 104 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 SALL4Q9UJQ4 1053 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 HYOU1Q9Y4L1 999 aa13.2□□□□□ -0.3
HMGCL-202ENST00000374487 UBE4BO95155 1302 aa13.19□□□□□ -0.3
HMGCL-202ENST00000374487 MYCP01106 439 aaPredicted RBP13.19□□□□□ -0.3
HMGCL-202ENST00000374487 MYCLP12524 364 aaPredicted RBP13.19□□□□□ -0.3
HMGCL-202ENST00000374487 CYP2J2P51589 502 aa13.19□□□□□ -0.3
HMGCL-202ENST00000374487 GPS2Q13227 327 aa13.19□□□□□ -0.3
HMGCL-202ENST00000374487 NFIL3Q16649 462 aa13.19□□□□□ -0.3
HMGCL-202ENST00000374487 GOLGA5Q8TBA6 731 aa13.19□□□□□ -0.3
HMGCL-202ENST00000374487 SYTL5Q8TDW5 730 aaPredicted RBP13.19□□□□□ -0.3
HMGCL-202ENST00000374487 OSBPL9Q96SU4 736 aa13.19□□□□□ -0.3
HMGCL-202ENST00000374487 PSMB7Q99436 277 aa13.19□□□□□ -0.3
HMGCL-202ENST00000374487 AGO4Q9HCK5 861 aaKnown RBP13.19□□□□□ -0.3
HMGCL-202ENST00000374487 LARSQ9P2J5 1176 aaKnown RBP13.19□□□□□ -0.3
HMGCL-202ENST00000374487 PNMA3Q9UL41 463 aa13.19□□□□□ -0.3
HMGCL-202ENST00000374487 PNMA2Q9UL42 364 aa13.19□□□□□ -0.3
HMGCL-202ENST00000374487 PPP1R9AQ9ULJ8 1098 aa13.19□□□□□ -0.3
HMGCL-202ENST00000374487 ZMYM2Q9UBW7 1377 aa13.19□□□□□ -0.3
HMGCL-202ENST00000374487 PDE2AO00408 941 aaPredicted RBP13.18□□□□□ -0.3
HMGCL-202ENST00000374487 POLR3GO15318 223 aaPredicted RBP13.18□□□□□ -0.3
HMGCL-202ENST00000374487 RPS6P62753 249 aaKnown RBP13.18□□□□□ -0.3
HMGCL-202ENST00000374487 PTK2Q05397 1052 aa13.18□□□□□ -0.3
HMGCL-202ENST00000374487 PLS1Q14651 629 aa13.18□□□□□ -0.3
HMGCL-202ENST00000374487 COG2Q14746 738 aa13.18□□□□□ -0.3
HMGCL-202ENST00000374487 TERF2Q15554 542 aa13.18□□□□□ -0.3
HMGCL-202ENST00000374487 NAB2Q15742 525 aa13.18□□□□□ -0.3
HMGCL-202ENST00000374487 IRF2BP2Q7Z5L9 587 aa13.18□□□□□ -0.3
HMGCL-202ENST00000374487 CREG2Q8IUH2 290 aa13.18□□□□□ -0.3
HMGCL-202ENST00000374487 TRERF1Q96PN7 1200 aa13.18□□□□□ -0.3
HMGCL-202ENST00000374487 TAAR1Q96RJ0 339 aa13.18□□□□□ -0.3
HMGCL-202ENST00000374487 FIZ1Q96SL8 496 aa13.18□□□□□ -0.3
HMGCL-202ENST00000374487 MKNK1Q9BUB5 465 aa13.18□□□□□ -0.3
HMGCL-202ENST00000374487 AGPAT3Q9NRZ7 376 aa13.18□□□□□ -0.3
HMGCL-202ENST00000374487 TBC1D22BQ9NU19 505 aa13.18□□□□□ -0.3
HMGCL-202ENST00000374487 L1RE1Q9UN81 338 aa13.18□□□□□ -0.3
HMGCL-202ENST00000374487 UBIAD1Q9Y5Z9 338 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 153.1 ms