RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 RNF168Q8IYW5 571 aaPredicted RBP10.29□□□□□ -0.76
SF3A3-201ENST00000373019 CFAP61Q8NHU2 1237 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 DDX27Q96GQ7 796 aaKnown RBP10.29□□□□□ -0.76
SF3A3-201ENST00000373019 LBHD1Q9BQE6 289 aaPredicted RBP10.29□□□□□ -0.76
SF3A3-201ENST00000373019 CCDC113Q9H0I3 377 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 TLE6Q9H808 572 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 NLRC4Q9NPP4 1024 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 PLCH1Q4KWH8 1693 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 ATP5HO75947 161 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 BMP15O95972 392 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 MTFR1Q15390 333 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 SLC18A3Q16572 532 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 SOGA3Q5TF21 947 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 LRRC74BQ6ZQY2 392 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 WDR60Q8WVS4 1066 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 NR1H4Q96RI1 486 aaPredicted RBP10.29□□□□□ -0.76
SF3A3-201ENST00000373019 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.29□□□□□ -0.766e-8■■■■■ 208.6
SF3A3-201ENST00000373019 RTCBQ9Y3I0 505 aaKnown RBP10.29□□□□□ -0.76
SF3A3-201ENST00000373019 PRDM1O75626 825 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 LMNAP02545 664 aaKnown RBP10.29□□□□□ -0.76
SF3A3-201ENST00000373019 CDK7P50613 346 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 OXCT1P55809 520 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 RCN1Q15293 331 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 AKAP4Q5JQC9 854 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 FBXO25Q8TCJ0 367 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 NAT14Q8WUY8 206 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 DCAF5Q96JK2 942 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 MIPEPQ99797 713 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 PAIP2BQ9ULR5 123 aaKnown RBP10.29□□□□□ -0.76
SF3A3-201ENST00000373019 RPL26L1Q9UNX3 145 aaKnown RBP10.29□□□□□ -0.76
SF3A3-201ENST00000373019 SH3GLB1Q9Y371 365 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 SLC4A4Q9Y6R1 1079 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 PKD1L3Q7Z443 1732 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 ABCA3Q99758 1704 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 MARF1Q9Y4F3 1742 aaKnown RBP10.29□□□□□ -0.76
SF3A3-201ENST00000373019 KRT36O76013 467 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 NOL4O94818 638 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 CBX6O95503 412 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 KRT2P35908 639 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 YARSP54577 528 aaKnown RBP10.28□□□□□ -0.76
SF3A3-201ENST00000373019 KBTBD12Q3ZCT8 623 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 ACSBG2Q5FVE4 666 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 OLFML2BQ68BL8 750 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 MFSD5Q6N075 450 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 SLF2Q8IX21 1173 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 CYP4X1Q8N118 509 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 GDAP1Q8TB36 358 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 DISC1Q9NRI5 854 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 hCG_1642624A0A1W2PR95 340 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 RAD21O60216 631 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 HNRNPCP07910 306 aaKnown RBP eCLIP10.28□□□□□ -0.76
SF3A3-201ENST00000373019 PABPC4LP0CB38 370 aaKnown RBP10.28□□□□□ -0.76
SF3A3-201ENST00000373019 FOXO4P98177 505 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 AP1B1Q10567 949 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 TCERG1LQ5VWI1 586 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 BTNL9Q6UXG8 535 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 OTUD6AQ7L8S5 288 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 ZNF554Q86TJ5 538 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 SPATA24Q86W54 205 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 VSIG1Q86XK7 387 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 RIBC1Q8N443 379 aaPredicted RBP10.28□□□□□ -0.76
SF3A3-201ENST00000373019 MARCH10Q8NA82 808 aaPredicted RBP10.28□□□□□ -0.76
SF3A3-201ENST00000373019 DNAJC1Q96KC8 554 aaKnown RBP10.28□□□□□ -0.76
SF3A3-201ENST00000373019 TGS1Q96RS0 853 aaKnown RBP10.28□□□□□ -0.76
SF3A3-201ENST00000373019 PYM1Q9BRP8 204 aaKnown RBP10.28□□□□□ -0.76
SF3A3-201ENST00000373019 PUS3Q9BZE2 481 aaKnown RBP10.28□□□□□ -0.76
SF3A3-201ENST00000373019 ASCC2Q9H1I8 757 aaPredicted RBP10.28□□□□□ -0.76
SF3A3-201ENST00000373019 SEMA6BQ9H3T3 888 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 CUEDC2Q9H467 287 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 AIPL1Q9NZN9 384 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 ADAMTS1Q9UHI8 967 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 AFDNP55196 1824 aaKnown RBP10.28□□□□□ -0.76
SF3A3-201ENST00000373019 ADAMTS3O15072 1205 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 MAGEB3O15480 346 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 FCER1AP12319 257 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 GRIA2P42262 883 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 ZAP70P43403 619 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 POLGP54098 1239 aaPredicted RBP10.28□□□□□ -0.76
SF3A3-201ENST00000373019 PLTPP55058 493 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 SLC34A1Q06495 639 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 COPS6Q7L5N1 327 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 TAOK1Q7L7X3 1001 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 DNAAF5Q86Y56 855 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 XAGE3Q8WTP9 111 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 PPP1R14BQ96C90 147 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 ZNF184Q99676 751 aaPredicted RBP10.28□□□□□ -0.76
SF3A3-201ENST00000373019 ZKSCAN3Q9BRR0 538 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 KBTBD4Q9NVX7 518 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 LMO7Q8WWI1 1683 aa10.28□□□□□ -0.76
SF3A3-201ENST00000373019 CAPN9O14815 690 aa10.27□□□□□ -0.76
SF3A3-201ENST00000373019 RASGRF2O14827 1237 aa10.27□□□□□ -0.76
SF3A3-201ENST00000373019 SERPING1P05155 500 aa10.27□□□□□ -0.76
SF3A3-201ENST00000373019 VAV1P15498 845 aa10.27□□□□□ -0.76
SF3A3-201ENST00000373019 ALOX15P16050 662 aaPredicted RBP10.27□□□□□ -0.76
SF3A3-201ENST00000373019 EMP3P54852 163 aa10.27□□□□□ -0.76
SF3A3-201ENST00000373019 SLC4A8Q2Y0W8 1093 aa10.27□□□□□ -0.76
SF3A3-201ENST00000373019 SLC9C1Q4G0N8 1177 aa10.27□□□□□ -0.76
SF3A3-201ENST00000373019 CCDC84Q86UT8 332 aaPredicted RBP10.27□□□□□ -0.76
SF3A3-201ENST00000373019 SCUBE1Q8IWY4 988 aa10.27□□□□□ -0.76
SF3A3-201ENST00000373019 C4orf32Q8N8J7 132 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms