RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 UTP6Q9NYH9 597 aaKnown RBP18.51■□□□□ 0.55
PRKCD-201ENST00000330452 IGKV6D-41A0A0C4DH26 115 aa18.51■□□□□ 0.55
PRKCD-201ENST00000330452 PNMA6FA0A0J9YX94 578 aa18.51■□□□□ 0.55
PRKCD-201ENST00000330452 HNRNPH3P31942 346 aaKnown RBP18.51■□□□□ 0.55
PRKCD-201ENST00000330452 TSNAXIP1Q2TAA8 658 aa18.51■□□□□ 0.55
PRKCD-201ENST00000330452 TMEM119Q4V9L6 283 aa18.51■□□□□ 0.55
PRKCD-201ENST00000330452 CCDC70Q6NSX1 233 aa18.51■□□□□ 0.55
PRKCD-201ENST00000330452 FGFBP2Q9BYJ0 223 aa18.51■□□□□ 0.55
PRKCD-201ENST00000330452 RIC8AQ9NPQ8 531 aa18.51■□□□□ 0.55
PRKCD-201ENST00000330452 DDX25Q9UHL0 483 aaKnown RBP18.51■□□□□ 0.55
PRKCD-201ENST00000330452 ANO9A1A5B4 782 aa18.5■□□□□ 0.55
PRKCD-201ENST00000330452 USP17L10C9JJH3 530 aa18.5■□□□□ 0.55
PRKCD-201ENST00000330452 TTLL1O95922 423 aa18.5■□□□□ 0.55
PRKCD-201ENST00000330452 PDHA1P08559 390 aa18.5■□□□□ 0.55
PRKCD-201ENST00000330452 CFAP58Q5T655 872 aa18.5■□□□□ 0.55
PRKCD-201ENST00000330452 TMEM154Q6P9G4 183 aa18.5■□□□□ 0.55
PRKCD-201ENST00000330452 ANKRD13CQ8N6S4 541 aa18.5■□□□□ 0.55
PRKCD-201ENST00000330452 MASTLQ96GX5 879 aa18.5■□□□□ 0.55
PRKCD-201ENST00000330452 IWS1Q96ST2 819 aa18.5■□□□□ 0.55
PRKCD-201ENST00000330452 TANGO6Q9C0B7 1094 aa18.5■□□□□ 0.55
PRKCD-201ENST00000330452 SMAPO00193 183 aa18.5■□□□□ 0.55
PRKCD-201ENST00000330452 AKR1B10O60218 316 aa18.5■□□□□ 0.55
PRKCD-201ENST00000330452 MARCH6O60337 910 aa18.5■□□□□ 0.55
PRKCD-201ENST00000330452 HPDP32754 393 aaPredicted RBP18.5■□□□□ 0.55
PRKCD-201ENST00000330452 RFC5P40937 340 aa18.5■□□□□ 0.55
PRKCD-201ENST00000330452 EHHADHQ08426 723 aa18.5■□□□□ 0.55
PRKCD-201ENST00000330452 OLFML1Q6UWY5 402 aa18.5■□□□□ 0.55
PRKCD-201ENST00000330452 GBP7Q8N8V2 638 aaPredicted RBP18.5■□□□□ 0.55
PRKCD-201ENST00000330452 TRAPPC9Q96Q05 1148 aa18.5■□□□□ 0.55
PRKCD-201ENST00000330452 PSMB7Q99436 277 aa18.5■□□□□ 0.55
PRKCD-201ENST00000330452 SH2D4AQ9H788 454 aa18.5■□□□□ 0.55
PRKCD-201ENST00000330452 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.5■□□□□ 0.55
PRKCD-201ENST00000330452 PLIN4Q96Q06 1357 aa18.5■□□□□ 0.55
PRKCD-201ENST00000330452 HMGB1P1B2RPK0 211 aaPredicted RBP18.49■□□□□ 0.55
PRKCD-201ENST00000330452 CACNB1Q02641 598 aaPredicted RBP18.49■□□□□ 0.55
PRKCD-201ENST00000330452 LRRC63Q05C16 580 aa18.49■□□□□ 0.55
PRKCD-201ENST00000330452 COASYQ13057 564 aa18.49■□□□□ 0.55
PRKCD-201ENST00000330452 FOXB2Q5VYV0 432 aa18.49■□□□□ 0.55
PRKCD-201ENST00000330452 BAP1Q92560 729 aa18.49■□□□□ 0.55
PRKCD-201ENST00000330452 DNAJC19Q96DA6 116 aa18.49■□□□□ 0.55
PRKCD-201ENST00000330452 CCDC43Q96MW1 224 aaKnown RBP18.49■□□□□ 0.55
PRKCD-201ENST00000330452 SERPINB13Q9UIV8 391 aa18.49■□□□□ 0.55
PRKCD-201ENST00000330452 USO1O60763 962 aaKnown RBP18.49■□□□□ 0.55
PRKCD-201ENST00000330452 ALDH5A1P51649 535 aaPredicted RBP18.49■□□□□ 0.55
PRKCD-201ENST00000330452 MRPS25P82663 173 aaKnown RBP18.49■□□□□ 0.55
PRKCD-201ENST00000330452 PPARDQ03181 441 aa18.49■□□□□ 0.55
PRKCD-201ENST00000330452 CDC42EP5Q6NZY7 148 aa18.49■□□□□ 0.55
PRKCD-201ENST00000330452 ZBTB8BQ8NAP8 495 aaPredicted RBP18.49■□□□□ 0.55
PRKCD-201ENST00000330452 RUBCNQ92622 972 aa18.49■□□□□ 0.55
PRKCD-201ENST00000330452 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.49■□□□□ 0.55
PRKCD-201ENST00000330452 LRRC1Q9BTT6 524 aa18.49■□□□□ 0.55
PRKCD-201ENST00000330452 COA1Q9GZY4 146 aa18.49■□□□□ 0.55
PRKCD-201ENST00000330452 KANSL2Q9H9L4 492 aa18.49■□□□□ 0.55
PRKCD-201ENST00000330452 H0YIN7 160 aa18.48■□□□□ 0.55
PRKCD-201ENST00000330452 CLK2P49760 499 aaKnown RBP18.48■□□□□ 0.55
PRKCD-201ENST00000330452 IFI16Q16666 785 aaKnown RBP18.48■□□□□ 0.55
PRKCD-201ENST00000330452 CCDC92Q53HC0 331 aaPredicted RBP18.48■□□□□ 0.55
PRKCD-201ENST00000330452 APBB1IPQ7Z5R6 666 aaPredicted RBP18.48■□□□□ 0.55
PRKCD-201ENST00000330452 SAPCD2Q86UD0 394 aa18.48■□□□□ 0.55
PRKCD-201ENST00000330452 CCDC84Q86UT8 332 aaPredicted RBP18.48■□□□□ 0.55
PRKCD-201ENST00000330452 CREG2Q8IUH2 290 aa18.48■□□□□ 0.55
PRKCD-201ENST00000330452 CD302Q8IX05 232 aa18.48■□□□□ 0.55
PRKCD-201ENST00000330452 C1orf131Q8NDD1 294 aaKnown RBP18.48■□□□□ 0.55
PRKCD-201ENST00000330452 NLRC4Q9NPP4 1024 aa18.48■□□□□ 0.55
PRKCD-201ENST00000330452 SMARCAL1Q9NZC9 954 aa18.48■□□□□ 0.55
PRKCD-201ENST00000330452 SALL4Q9UJQ4 1053 aa18.48■□□□□ 0.55
PRKCD-201ENST00000330452 SNX12Q9UMY4 172 aa18.48■□□□□ 0.55
PRKCD-201ENST00000330452 LRRC42Q9Y546 428 aa18.48■□□□□ 0.55
PRKCD-201ENST00000330452 E9PMD0 336 aa18.48■□□□□ 0.55
PRKCD-201ENST00000330452 TACC1O75410 805 aa18.48■□□□□ 0.55
PRKCD-201ENST00000330452 FGFR1OPO95684 399 aaKnown RBP18.48■□□□□ 0.55
PRKCD-201ENST00000330452 CXCR5P32302 372 aa18.48■□□□□ 0.55
PRKCD-201ENST00000330452 SHMT1P34896 483 aa18.48■□□□□ 0.55
PRKCD-201ENST00000330452 KCNJ2P63252 427 aa18.48■□□□□ 0.55
PRKCD-201ENST00000330452 KCNMA1Q12791 1236 aa18.48■□□□□ 0.55
PRKCD-201ENST00000330452 OR52E8Q6IFG1 317 aa18.48■□□□□ 0.55
PRKCD-201ENST00000330452 MYOCDQ8IZQ8 938 aa18.48■□□□□ 0.55
PRKCD-201ENST00000330452 ARFGAP2Q8N6H7 521 aa18.48■□□□□ 0.55
PRKCD-201ENST00000330452 TEKT1Q969V4 418 aa18.48■□□□□ 0.55
PRKCD-201ENST00000330452 SLC12A6Q9UHW9 1150 aa18.48■□□□□ 0.55
PRKCD-201ENST00000330452 BARX2Q9UMQ3 279 aaPredicted RBP18.48■□□□□ 0.55
PRKCD-201ENST00000330452 NPHP3-ACAD11A0A0J9YXS1 232 aa18.47■□□□□ 0.55
PRKCD-201ENST00000330452 USP17L15C9J2P7 530 aa18.47■□□□□ 0.55
PRKCD-201ENST00000330452 USP17L13C9JLJ4 530 aa18.47■□□□□ 0.55
PRKCD-201ENST00000330452 USP17L11C9JVI0 530 aa18.47■□□□□ 0.55
PRKCD-201ENST00000330452 USP17L18D6R9N7 530 aa18.47■□□□□ 0.55
PRKCD-201ENST00000330452 USP17L22D6RA61 530 aa18.47■□□□□ 0.55
PRKCD-201ENST00000330452 USP17L17D6RBQ6 530 aa18.47■□□□□ 0.55
PRKCD-201ENST00000330452 USP17L19D6RCP7 530 aa18.47■□□□□ 0.55
PRKCD-201ENST00000330452 USP17L20D6RJB6 530 aa18.47■□□□□ 0.55
PRKCD-201ENST00000330452 TRAF5O00463 557 aa18.47■□□□□ 0.55
PRKCD-201ENST00000330452 TMCC1O94876 653 aa18.47■□□□□ 0.55
PRKCD-201ENST00000330452 NQO1P15559 274 aaKnown RBP18.47■□□□□ 0.55
PRKCD-201ENST00000330452 GFPT1Q06210 699 aaPredicted RBP18.47■□□□□ 0.55
PRKCD-201ENST00000330452 ADCY1Q08828 1119 aa18.47■□□□□ 0.55
PRKCD-201ENST00000330452 USP17L24Q0WX57 530 aa18.47■□□□□ 0.55
PRKCD-201ENST00000330452 USP17L6PQ6QN14 398 aa18.47■□□□□ 0.55
PRKCD-201ENST00000330452 NELFCDQ8IXH7 590 aa18.47■□□□□ 0.55
PRKCD-201ENST00000330452 MMGT1Q8N4V1 131 aa18.47■□□□□ 0.55
PRKCD-201ENST00000330452 TSG101Q99816 390 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms