RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 GOLGA8NF8WBI6 632 aa12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 APOA5Q6Q788 366 aa12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 SLFN12Q8IYM2 578 aa12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 ACRBPQ8NEB7 543 aa12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 NEK9Q8TD19 979 aa12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 HINFPQ9BQA5 517 aa12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 NOP53Q9NZM5 478 aaKnown RBP12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 MAN1B1Q9UKM7 699 aa12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 GOLGA8FQ08AF8 430 aa12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 GOLGA8DPQ0D2H9 430 aa12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 RESTQ13127 1097 aa12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 PPP2R5AQ15172 486 aa12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 C10orf76Q5T2E6 689 aa12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 MMP19Q99542 508 aa12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 AMNQ9BXJ7 453 aa12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 PLIN4Q96Q06 1357 aa12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 IGF2BP3O00425 579 aaKnown RBP eCLIP12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 GAS7O60861 476 aa12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 SLURP2P0DP57 97 aa12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 ZNF658Q5TYW1 1059 aaPredicted RBP12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 CC2D1AQ6P1N0 951 aaPredicted RBP12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 CCDC117Q8IWD4 279 aaPredicted RBP12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 CHST13Q8NET6 341 aa12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 ATG4CQ96DT6 458 aa12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 MIS12Q9H081 205 aa12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 RWDD2AQ9UIY3 292 aa12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 SOWAHDA6NJG2 315 aa12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 GJA5P36382 358 aa12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 ERVK-9P63128 1117 aa12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 ERVK-24P63145 666 aa12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 FKBP3Q00688 224 aaKnown RBP12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 PTPROQ16827 1216 aa12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 TPH2Q8IWU9 490 aa12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 HAUS8Q9BT25 410 aa12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 SUDS3Q9H7L9 328 aaPredicted RBP12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 STRNO43815 780 aa12.75□□□□□ -0.37
SYNGAP1-201ENST00000293748 FGRP09769 529 aa12.75□□□□□ -0.37
SYNGAP1-201ENST00000293748 P4HA1P13674 534 aa12.75□□□□□ -0.37
SYNGAP1-201ENST00000293748 POLR2BP30876 1174 aaKnown RBP12.75□□□□□ -0.37
SYNGAP1-201ENST00000293748 OAZ1P54368 228 aa12.75□□□□□ -0.37
SYNGAP1-201ENST00000293748 CUL1Q13616 776 aa12.75□□□□□ -0.37
SYNGAP1-201ENST00000293748 GLE1Q53GS7 698 aaKnown RBP12.75□□□□□ -0.37
SYNGAP1-201ENST00000293748 FAM178BQ8IXR5 827 aa12.75□□□□□ -0.37
SYNGAP1-201ENST00000293748 ENAHQ8N8S7 591 aaPredicted RBP12.75□□□□□ -0.37
SYNGAP1-201ENST00000293748 MS4A4AQ96JQ5 239 aa12.75□□□□□ -0.37
SYNGAP1-201ENST00000293748 ACAD9Q9H845 621 aa12.75□□□□□ -0.37
SYNGAP1-201ENST00000293748 SPC25Q9HBM1 224 aa12.75□□□□□ -0.37
SYNGAP1-201ENST00000293748 ATF7P17544 494 aaPredicted RBP12.75□□□□□ -0.37
SYNGAP1-201ENST00000293748 PLTPP55058 493 aa12.75□□□□□ -0.37
SYNGAP1-201ENST00000293748 BPIFB4P59827 614 aa12.75□□□□□ -0.37
SYNGAP1-201ENST00000293748 ESRRGP62508 458 aa12.75□□□□□ -0.37
SYNGAP1-201ENST00000293748 SATB1Q01826 763 aa12.75□□□□□ -0.37
SYNGAP1-201ENST00000293748 C2orf54Q08AI8 447 aa12.75□□□□□ -0.37
SYNGAP1-201ENST00000293748 TREML2Q5T2D2 321 aa12.75□□□□□ -0.37
SYNGAP1-201ENST00000293748 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.75□□□□□ -0.37
SYNGAP1-201ENST00000293748 MYO1FO00160 1098 aa12.75□□□□□ -0.37
SYNGAP1-201ENST00000293748 NMT2O60551 498 aa12.75□□□□□ -0.37
SYNGAP1-201ENST00000293748 INHBAP08476 426 aa12.75□□□□□ -0.37
SYNGAP1-201ENST00000293748 SHCBP1Q8NEM2 672 aa12.75□□□□□ -0.37
SYNGAP1-201ENST00000293748 CD99L2Q8TCZ2 262 aa12.75□□□□□ -0.37
SYNGAP1-201ENST00000293748 CDKL2Q92772 493 aa12.75□□□□□ -0.37
SYNGAP1-201ENST00000293748 EIF3CLB5ME19 914 aaKnown RBP12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 ZNF543Q08ER8 600 aa12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 TMTC3Q6ZXV5 915 aa12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 CMTR1Q8N1G2 835 aaKnown RBP12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 TRPM7Q96QT4 1865 aa12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 EIF3CQ99613 913 aaKnown RBP12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 HAUS2Q9NVX0 235 aa12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 NOVA2Q9UNW9 492 aaKnown RBP12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 MORC2Q9Y6X9 1032 aaPredicted RBP12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 SSC5DA1L4H1 1573 aa12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 POC1B-GALNT4F8VUJ3 575 aa12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 SPECC1L-ADORA2AF8WAN1 911 aa12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 H0YCG3 227 aa12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 SH2B2O14492 632 aaPredicted RBP12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 TSGA10IPQ3SY00 556 aa12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 LRRC23Q53EV4 343 aaPredicted RBP12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 PRR16Q569H4 304 aa12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 MB21D2Q8IYB1 491 aaPredicted RBP12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 NSMCE1Q8WV22 266 aa12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 CFBP00751 764 aa12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 NSFP46459 744 aaKnown RBP12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 RCAN1P53805 252 aa12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 BRDTQ58F21 947 aaPredicted RBP12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 CAPN12Q6ZSI9 719 aa12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 TNS4Q8IZW8 715 aa12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 TRIM11Q96F44 468 aa12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 SPATC1LQ9H0A9 340 aa12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 CCDC188H7C350 402 aa12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 RASGRF2O14827 1237 aa12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 ASPHQ12797 758 aa12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 TCP11X2Q5H9J9 407 aa12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 BSPRYQ5W0U4 402 aa12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 NXNQ6DKJ4 435 aa12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 PPM1KQ8N3J5 372 aa12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 DRC3Q9H069 523 aa12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 THAP9Q9H5L6 903 aa12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 RAVER2Q9HCJ3 691 aaKnown RBP12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 SAMSN1Q9NSI8 373 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms