RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 EIF2AK1Q9BQI3 630 aaKnown RBP17.82■□□□□ 0.44
SCAP-201ENST00000265565 PDE2AO00408 941 aaPredicted RBP17.82■□□□□ 0.44
SCAP-201ENST00000265565 SLC37A4O43826 429 aa17.82■□□□□ 0.44
SCAP-201ENST00000265565 RPS6KA4O75676 772 aa17.82■□□□□ 0.44
SCAP-201ENST00000265565 CAMTA2O94983 1202 aa17.82■□□□□ 0.44
SCAP-201ENST00000265565 PDHA1P08559 390 aa17.82■□□□□ 0.44
SCAP-201ENST00000265565 PACS2Q86VP3 889 aa17.82■□□□□ 0.44
SCAP-201ENST00000265565 RFX6Q8HWS3 928 aa17.82■□□□□ 0.44
SCAP-201ENST00000265565 PYROXD1Q8WU10 500 aa17.82■□□□□ 0.44
SCAP-201ENST00000265565 TRIM11Q96F44 468 aa17.82■□□□□ 0.44
SCAP-201ENST00000265565 C11orf70Q9BRQ4 267 aa17.82■□□□□ 0.44
SCAP-201ENST00000265565 NBPF3Q9H094 633 aa17.82■□□□□ 0.44
SCAP-201ENST00000265565 SLC40A1Q9NP59 571 aa17.82■□□□□ 0.44
SCAP-201ENST00000265565 TRPC6Q9Y210 931 aa17.82■□□□□ 0.44
SCAP-201ENST00000265565 TTLL3Q9Y4R7 772 aa17.82■□□□□ 0.44
SCAP-201ENST00000265565 TMEM131LA2VDJ0 1609 aa17.82■□□□□ 0.44
SCAP-201ENST00000265565 SLC16A4O15374 487 aa17.82■□□□□ 0.44
SCAP-201ENST00000265565 VEGFAP15692 232 aaPredicted RBP17.82■□□□□ 0.44
SCAP-201ENST00000265565 GRB10Q13322 594 aa17.82■□□□□ 0.44
SCAP-201ENST00000265565 SPARCL1Q14515 664 aa17.82■□□□□ 0.44
SCAP-201ENST00000265565 DNAJC24Q6P3W2 148 aa17.82■□□□□ 0.44
SCAP-201ENST00000265565 MIGA2Q7L4E1 593 aa17.82■□□□□ 0.44
SCAP-201ENST00000265565 YIPF3Q9GZM5 350 aa17.82■□□□□ 0.44
SCAP-201ENST00000265565 ADAM22Q9P0K1 906 aa17.82■□□□□ 0.44
SCAP-201ENST00000265565 USP21Q9UK80 565 aa17.82■□□□□ 0.44
SCAP-201ENST00000265565 ESRRAP11474 423 aaPredicted RBP17.81■□□□□ 0.44
SCAP-201ENST00000265565 FGFR2P21802 821 aa17.81■□□□□ 0.44
SCAP-201ENST00000265565 GEN1Q17RS7 908 aa17.81■□□□□ 0.44
SCAP-201ENST00000265565 C1orf167Q5SNV9 1468 aa17.81■□□□□ 0.44
SCAP-201ENST00000265565 TNS3Q68CZ2 1445 aa17.81■□□□□ 0.44
SCAP-201ENST00000265565 SPAG7O75391 227 aa17.81■□□□□ 0.44
SCAP-201ENST00000265565 VAMP7P51809 220 aa17.81■□□□□ 0.44
SCAP-201ENST00000265565 LONRF1Q17RB8 773 aa17.81■□□□□ 0.44
SCAP-201ENST00000265565 MCF2L2Q86YR7 1114 aa17.81■□□□□ 0.44
SCAP-201ENST00000265565 ZNF526Q8TF50 670 aaPredicted RBP17.81■□□□□ 0.44
SCAP-201ENST00000265565 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.81■□□□□ 0.442e-6■■■■■ 53.2
SCAP-201ENST00000265565 GINM1Q9NU53 330 aa17.81■□□□□ 0.44
SCAP-201ENST00000265565 MAD2L2Q9UI95 211 aa17.81■□□□□ 0.44
SCAP-201ENST00000265565 SERPINB6P35237 376 aa17.81■□□□□ 0.44
SCAP-201ENST00000265565 IRX4P78413 519 aa17.81■□□□□ 0.44
SCAP-201ENST00000265565 CCHCR1Q8TD31 782 aa17.81■□□□□ 0.44
SCAP-201ENST00000265565 NXF1Q9UBU9 619 aaKnown RBP17.81■□□□□ 0.44
SCAP-201ENST00000265565 NAGPAQ9UK23 515 aa17.81■□□□□ 0.44
SCAP-201ENST00000265565 FAM237AA0A1B0GTK4 181 aa17.8■□□□□ 0.44
SCAP-201ENST00000265565 SLC29A2Q14542 456 aa17.8■□□□□ 0.44
SCAP-201ENST00000265565 CENPPQ6IPU0 288 aa17.8■□□□□ 0.44
SCAP-201ENST00000265565 LRIG3Q6UXM1 1119 aa17.8■□□□□ 0.44
SCAP-201ENST00000265565 SUPT20HQ8NEM7 779 aa17.8■□□□□ 0.44
SCAP-201ENST00000265565 SAAL1Q96ER3 474 aa17.8■□□□□ 0.44
SCAP-201ENST00000265565 LRRC37BQ96QE4 947 aa17.8■□□□□ 0.44
SCAP-201ENST00000265565 NTSR2O95665 410 aa17.8■□□□□ 0.44
SCAP-201ENST00000265565 DHX34Q14147 1143 aaKnown RBP17.8■□□□□ 0.44
SCAP-201ENST00000265565 ZC2HC1CQ53FD0 456 aaPredicted RBP17.8■□□□□ 0.44
SCAP-201ENST00000265565 MIPOL1Q8TD10 442 aa17.8■□□□□ 0.44
SCAP-201ENST00000265565 TTC17Q96AE7 1141 aa17.8■□□□□ 0.44
SCAP-201ENST00000265565 KDM6AO15550 1401 aaPredicted RBP17.8■□□□□ 0.44
SCAP-201ENST00000265565 PREX1Q8TCU6 1659 aa17.8■□□□□ 0.44
SCAP-201ENST00000265565 LRRC10BA6NIK2 292 aa17.8■□□□□ 0.44
SCAP-201ENST00000265565 PDHBP11177 359 aa17.8■□□□□ 0.44
SCAP-201ENST00000265565 ZNF543Q08ER8 600 aa17.8■□□□□ 0.44
SCAP-201ENST00000265565 SF3B3Q15393 1217 aaKnown RBP17.8■□□□□ 0.44
SCAP-201ENST00000265565 CC2D2BQ6DHV5 1058 aa17.8■□□□□ 0.44
SCAP-201ENST00000265565 AEBP2Q6ZN18 517 aaPredicted RBP17.8■□□□□ 0.44
SCAP-201ENST00000265565 FBXO33Q7Z6M2 555 aa17.8■□□□□ 0.44
SCAP-201ENST00000265565 PPP4R1Q8TF05 950 aa17.8■□□□□ 0.44
SCAP-201ENST00000265565 DUSP9Q99956 384 aaKnown RBP17.8■□□□□ 0.44
SCAP-201ENST00000265565 VIRMAQ69YN4 1812 aaKnown RBP17.8■□□□□ 0.44
SCAP-201ENST00000265565 ZNF335Q9H4Z2 1342 aaPredicted RBP17.8■□□□□ 0.44
SCAP-201ENST00000265565 NKX1-1Q15270 411 aaPredicted RBP17.79■□□□□ 0.44
SCAP-201ENST00000265565 GNPTABQ3T906 1256 aa17.79■□□□□ 0.44
SCAP-201ENST00000265565 TMEM139Q8IV31 216 aa17.79■□□□□ 0.44
SCAP-201ENST00000265565 CDAN1Q8IWY9 1227 aa17.79■□□□□ 0.44
SCAP-201ENST00000265565 KIF2BQ8N4N8 673 aa17.79■□□□□ 0.44
SCAP-201ENST00000265565 SPDL1Q96EA4 605 aa17.79■□□□□ 0.44
SCAP-201ENST00000265565 C9orf72Q96LT7 481 aa17.79■□□□□ 0.44
SCAP-201ENST00000265565 AGPAT1Q99943 283 aa17.79■□□□□ 0.44
SCAP-201ENST00000265565 CYP26A1O43174 497 aa17.79■□□□□ 0.44
SCAP-201ENST00000265565 FAM153BP0C7A2 387 aa17.79■□□□□ 0.44
SCAP-201ENST00000265565 PRLRP16471 622 aa17.79■□□□□ 0.44
SCAP-201ENST00000265565 ERFP50548 548 aa17.79■□□□□ 0.44
SCAP-201ENST00000265565 FAM153CQ494X1 144 aa17.79■□□□□ 0.44
SCAP-201ENST00000265565 FIGNQ5HY92 759 aa17.79■□□□□ 0.44
SCAP-201ENST00000265565 KDM7AQ6ZMT4 941 aa17.79■□□□□ 0.44
SCAP-201ENST00000265565 JAMLQ86YT9 394 aa17.79■□□□□ 0.44
SCAP-201ENST00000265565 SLC30A5Q8TAD4 765 aa17.79■□□□□ 0.44
SCAP-201ENST00000265565 MAML1Q92585 1016 aa17.79■□□□□ 0.44
SCAP-201ENST00000265565 CYTH2Q99418 400 aa17.79■□□□□ 0.44
SCAP-201ENST00000265565 FAM153AQ9UHL3 310 aa17.79■□□□□ 0.44
SCAP-201ENST00000265565 KCNG1Q9UIX4 513 aa17.79■□□□□ 0.44
SCAP-201ENST00000265565 RNF225M0QZC1 329 aaPredicted RBP17.79■□□□□ 0.44
SCAP-201ENST00000265565 CLGNO14967 610 aa17.79■□□□□ 0.44
SCAP-201ENST00000265565 KLHDC7AQ5VTJ3 777 aa17.79■□□□□ 0.44
SCAP-201ENST00000265565 TMEM179Q6ZVK1 233 aa17.79■□□□□ 0.44
SCAP-201ENST00000265565 CENPUQ71F23 418 aa17.79■□□□□ 0.44
SCAP-201ENST00000265565 TRIM4Q9C037 500 aa17.79■□□□□ 0.44
SCAP-201ENST00000265565 ITSN1Q15811 1721 aa17.79■□□□□ 0.44
SCAP-201ENST00000265565 DIAPH2O60879 1101 aa17.79■□□□□ 0.44
SCAP-201ENST00000265565 STK10O94804 968 aaKnown RBP17.79■□□□□ 0.44
SCAP-201ENST00000265565 SSTR3P32745 418 aaPredicted RBP17.79■□□□□ 0.44
SCAP-201ENST00000265565 TFAMQ00059 246 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms