RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.18□□□□□ -0.14
NUP54-201ENST00000264883 DLGAP2Q9P1A6 1054 aa14.18□□□□□ -0.14
NUP54-201ENST00000264883 ARL2BPQ9Y2Y0 163 aa14.18□□□□□ -0.14
NUP54-201ENST00000264883 TLR2O60603 784 aa14.17□□□□□ -0.14
NUP54-201ENST00000264883 CCNB1P14635 433 aa14.17□□□□□ -0.14
NUP54-201ENST00000264883 ACADSP16219 412 aa14.17□□□□□ -0.14
NUP54-201ENST00000264883 NAPAP54920 295 aa14.17□□□□□ -0.14
NUP54-201ENST00000264883 DIXDC1Q155Q3 683 aa14.17□□□□□ -0.14
NUP54-201ENST00000264883 CNGA2Q16280 664 aa14.17□□□□□ -0.14
NUP54-201ENST00000264883 LETM2Q2VYF4 491 aa14.17□□□□□ -0.14
NUP54-201ENST00000264883 SOGA3Q5TF21 947 aa14.17□□□□□ -0.14
NUP54-201ENST00000264883 STK32AQ8WU08 396 aa14.17□□□□□ -0.14
NUP54-201ENST00000264883 DYDC1Q8WWB3 177 aa14.17□□□□□ -0.14
NUP54-201ENST00000264883 LARP4BQ92615 738 aaKnown RBP14.17□□□□□ -0.14
NUP54-201ENST00000264883 FGD4Q96M96 766 aa14.17□□□□□ -0.14
NUP54-201ENST00000264883 CEP63Q96MT8 703 aa14.17□□□□□ -0.14
NUP54-201ENST00000264883 TRIM31Q9BZY9 425 aa14.17□□□□□ -0.14
NUP54-201ENST00000264883 IL17RBQ9NRM6 502 aa14.17□□□□□ -0.14
NUP54-201ENST00000264883 MCM9Q9NXL9 1143 aa14.17□□□□□ -0.14
NUP54-201ENST00000264883 KLRG2A4D1S0 409 aaPredicted RBP14.17□□□□□ -0.14
NUP54-201ENST00000264883 GJB6O95452 261 aa14.17□□□□□ -0.14
NUP54-201ENST00000264883 SETSIPP0DME0 302 aa14.17□□□□□ -0.14
NUP54-201ENST00000264883 PMS2P54278 862 aa14.17□□□□□ -0.14
NUP54-201ENST00000264883 C6orf118Q5T5N4 469 aa14.17□□□□□ -0.14
NUP54-201ENST00000264883 LRRC55Q6ZSA7 311 aa14.17□□□□□ -0.14
NUP54-201ENST00000264883 NCAPG2Q86XI2 1143 aa14.17□□□□□ -0.14
NUP54-201ENST00000264883 FLAD1Q8NFF5 587 aa14.17□□□□□ -0.14
NUP54-201ENST00000264883 TBC1D16Q8TBP0 767 aa14.17□□□□□ -0.14
NUP54-201ENST00000264883 CDK5RAP3Q96JB5 506 aa14.17□□□□□ -0.14
NUP54-201ENST00000264883 TRAPPC9Q96Q05 1148 aa14.17□□□□□ -0.14
NUP54-201ENST00000264883 MMTAG2Q9BU76 263 aaKnown RBP14.17□□□□□ -0.14
NUP54-201ENST00000264883 EPB41L4BQ9H329 900 aa14.17□□□□□ -0.14
NUP54-201ENST00000264883 PABPC3Q9H361 631 aaKnown RBP14.17□□□□□ -0.14
NUP54-201ENST00000264883 ATP6V0A2Q9Y487 856 aa14.17□□□□□ -0.14
NUP54-201ENST00000264883 MYH4Q9Y623 1939 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 A0A087X0T9 212 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 TCP11X1B4DZS4 312 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 PEX11AO75192 247 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 BAG3O95817 575 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 FAM228BP0C875 321 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 TSPY3P0CV98 308 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 TSPY8P0CW00 308 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 SKIV2L2P42285 1042 aaKnown RBP14.16□□□□□ -0.14
NUP54-201ENST00000264883 EN1Q05925 392 aaPredicted RBP14.16□□□□□ -0.14
NUP54-201ENST00000264883 PTPROQ16827 1216 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 RBM12BQ8IXT5 1001 aaKnown RBP14.16□□□□□ -0.14
NUP54-201ENST00000264883 METTL13Q8N6R0 699 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 PIGOQ8TEQ8 1089 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 DNAJC9Q8WXX5 260 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 ANKRD2Q9GZV1 360 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 CCDC113Q9H0I3 377 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 GOLPH3Q9H4A6 298 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 MKNK2Q9HBH9 465 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 ETNK1Q9HBU6 452 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 CYP39A1Q9NYL5 469 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 COL4A3BPQ9Y5P4 624 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 PDLIM1O00151 329 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 TPBGLP0DKB5 382 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 CYP2D6P10635 497 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 TECP42680 631 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 MAGEA8P43361 318 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 FKBP3Q00688 224 aaKnown RBP14.16□□□□□ -0.14
NUP54-201ENST00000264883 GRAPQ13588 217 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 OR52E8Q6IFG1 317 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 NLGN1Q8N2Q7 840 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 GRAPLQ8TC17 118 aaPredicted RBP14.16□□□□□ -0.14
NUP54-201ENST00000264883 ATP8B4Q8TF62 1192 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 MAIP1Q8WWC4 291 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 UTP4Q969X6 686 aaKnown RBP14.16□□□□□ -0.14
NUP54-201ENST00000264883 TRIM51Q9BSJ1 452 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 CTNNAL1Q9UBT7 734 aa14.16□□□□□ -0.14
NUP54-201ENST00000264883 ANKRD31Q8N7Z5 1873 aa14.15□□□□□ -0.14
NUP54-201ENST00000264883 MYMKA6NI61 221 aa14.15□□□□□ -0.14
NUP54-201ENST00000264883 CYTH3O43739 400 aa14.15□□□□□ -0.14
NUP54-201ENST00000264883 CREB3O43889 395 aa14.15□□□□□ -0.14
NUP54-201ENST00000264883 HIBADHP31937 336 aaKnown RBP14.15□□□□□ -0.14
NUP54-201ENST00000264883 MARSP56192 900 aaKnown RBP14.15□□□□□ -0.14
NUP54-201ENST00000264883 GRB10Q13322 594 aa14.15□□□□□ -0.14
NUP54-201ENST00000264883 LONP2Q86WA8 852 aa14.15□□□□□ -0.14
NUP54-201ENST00000264883 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.15□□□□□ -0.14
NUP54-201ENST00000264883 ZNF444Q8N0Y2 327 aaPredicted RBP14.15□□□□□ -0.14
NUP54-201ENST00000264883 RNF25Q96BH1 459 aaPredicted RBP14.15□□□□□ -0.14
NUP54-201ENST00000264883 TANGO6Q9C0B7 1094 aa14.15□□□□□ -0.14
NUP54-201ENST00000264883 STMN4Q9H169 189 aaPredicted RBP14.15□□□□□ -0.14
NUP54-201ENST00000264883 BLOC1S4Q9NUP1 217 aa14.15□□□□□ -0.14
NUP54-201ENST00000264883 SEC63Q9UGP8 760 aaKnown RBP14.15□□□□□ -0.14
NUP54-201ENST00000264883 ADAMTS1Q9UHI8 967 aa14.15□□□□□ -0.14
NUP54-201ENST00000264883 IRS2Q9Y4H2 1338 aa14.15□□□□□ -0.14
NUP54-201ENST00000264883 SMCO2A6NFE2 343 aa14.15□□□□□ -0.14
NUP54-201ENST00000264883 SLC26A4O43511 780 aa14.15□□□□□ -0.14
NUP54-201ENST00000264883 ANXA13P27216 316 aa14.15□□□□□ -0.14
NUP54-201ENST00000264883 HOXA10P31260 410 aaPredicted RBP14.15□□□□□ -0.14
NUP54-201ENST00000264883 ARID5AQ03989 594 aa14.15□□□□□ -0.14
NUP54-201ENST00000264883 KCNMA1Q12791 1236 aa14.15□□□□□ -0.14
NUP54-201ENST00000264883 IRGCQ6NXR0 463 aa14.15□□□□□ -0.14
NUP54-201ENST00000264883 TAOK1Q7L7X3 1001 aa14.15□□□□□ -0.14
NUP54-201ENST00000264883 CROCCP2Q86T23 111 aa14.15□□□□□ -0.14
NUP54-201ENST00000264883 ASAP3Q8TDY4 903 aa14.15□□□□□ -0.14
NUP54-201ENST00000264883 RAD54LQ92698 747 aa14.15□□□□□ -0.14
NUP54-201ENST00000264883 HPS3Q969F9 1004 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms