RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 NHSQ6T4R5 1651 aa18.9■□□□□ 0.62
TRAM1-201ENST00000262213 CCT8L1PA6NM43 557 aa18.89■□□□□ 0.62
TRAM1-201ENST00000262213 TGFB1I1O43294 461 aa18.89■□□□□ 0.62
TRAM1-201ENST00000262213 RPSAP08865 295 aaKnown RBP18.89■□□□□ 0.62
TRAM1-201ENST00000262213 LMNB1P20700 586 aa18.89■□□□□ 0.62
TRAM1-201ENST00000262213 EIF3BP55884 814 aaKnown RBP18.89■□□□□ 0.62
TRAM1-201ENST00000262213 CBWD6Q4V339 395 aa18.89■□□□□ 0.62
TRAM1-201ENST00000262213 CBWD3Q5JTY5 395 aa18.89■□□□□ 0.62
TRAM1-201ENST00000262213 KIAA1755Q5JYT7 1200 aa18.89■□□□□ 0.62
TRAM1-201ENST00000262213 CBWD5Q5RIA9 395 aa18.89■□□□□ 0.62
TRAM1-201ENST00000262213 SLC30A5Q8TAD4 765 aa18.89■□□□□ 0.62
TRAM1-201ENST00000262213 ETNPPLQ8TBG4 499 aa18.89■□□□□ 0.62
TRAM1-201ENST00000262213 NAP1L4Q99733 375 aaKnown RBP18.89■□□□□ 0.62
TRAM1-201ENST00000262213 CD2APQ9Y5K6 639 aa18.89■□□□□ 0.62
TRAM1-201ENST00000262213 FAM13AO94988 1023 aa18.89■□□□□ 0.61
TRAM1-201ENST00000262213 IL1R1P14778 569 aa18.89■□□□□ 0.61
TRAM1-201ENST00000262213 RPA1P27694 616 aa18.89■□□□□ 0.61
TRAM1-201ENST00000262213 PNMA8AQ86V59 439 aaPredicted RBP18.89■□□□□ 0.61
TRAM1-201ENST00000262213 OLIG1Q8TAK6 271 aa18.89■□□□□ 0.61
TRAM1-201ENST00000262213 MGARPQ8TDB4 240 aa18.89■□□□□ 0.61
TRAM1-201ENST00000262213 PABPC3Q9H361 631 aaKnown RBP18.89■□□□□ 0.61
TRAM1-201ENST00000262213 INTS9Q9NV88 658 aaKnown RBP18.89■□□□□ 0.61
TRAM1-201ENST00000262213 PTPN22Q9Y2R2 807 aa18.89■□□□□ 0.61
TRAM1-201ENST00000262213 RABGAP1Q9Y3P9 1069 aa18.89■□□□□ 0.61
TRAM1-201ENST00000262213 GAKO14976 1311 aa18.89■□□□□ 0.61
TRAM1-201ENST00000262213 SPATA31A5Q5VU36 1347 aa18.89■□□□□ 0.61
TRAM1-201ENST00000262213 SPATA31A7Q8IWB4 1347 aa18.89■□□□□ 0.61
TRAM1-201ENST00000262213 MEIS2O14770 477 aa18.88■□□□□ 0.61
TRAM1-201ENST00000262213 TMEM253P0C7T8 217 aa18.88■□□□□ 0.61
TRAM1-201ENST00000262213 NPEPPSP55786 919 aa18.88■□□□□ 0.61
TRAM1-201ENST00000262213 KLRC3Q07444 240 aa18.88■□□□□ 0.61
TRAM1-201ENST00000262213 ZNF746Q6NUN9 644 aaPredicted RBP18.88■□□□□ 0.61
TRAM1-201ENST00000262213 KIRREL3Q8IZU9 778 aa18.88■□□□□ 0.61
TRAM1-201ENST00000262213 KRT35Q92764 455 aa18.88■□□□□ 0.61
TRAM1-201ENST00000262213 TXLNGYQ9BZA5 131 aa18.88■□□□□ 0.61
TRAM1-201ENST00000262213 CTTNBP2NLQ9P2B4 639 aa18.88■□□□□ 0.61
TRAM1-201ENST00000262213 DBR1Q9UK59 544 aaKnown RBP18.88■□□□□ 0.61
TRAM1-201ENST00000262213 INTUQ9ULD6 942 aa18.88■□□□□ 0.61
TRAM1-201ENST00000262213 MYO3BQ8WXR4 1341 aa18.88■□□□□ 0.61
TRAM1-201ENST00000262213 EML1O00423 815 aa18.88■□□□□ 0.61
TRAM1-201ENST00000262213 CLTAP09496 248 aa18.88■□□□□ 0.61
TRAM1-201ENST00000262213 ELF1P32519 619 aa18.88■□□□□ 0.61
TRAM1-201ENST00000262213 ZNF76P36508 570 aa18.88■□□□□ 0.61
TRAM1-201ENST00000262213 FMO5P49326 533 aa18.88■□□□□ 0.61
TRAM1-201ENST00000262213 PPATQ06203 517 aa18.88■□□□□ 0.61
TRAM1-201ENST00000262213 ARMC9Q7Z3E5 817 aa18.88■□□□□ 0.61
TRAM1-201ENST00000262213 TBC1D1Q86TI0 1168 aaPredicted RBP18.88■□□□□ 0.61
TRAM1-201ENST00000262213 TAX1BP1Q86VP1 789 aa18.88■□□□□ 0.61
TRAM1-201ENST00000262213 TPH2Q8IWU9 490 aa18.88■□□□□ 0.61
TRAM1-201ENST00000262213 ANKS4BQ8N8V4 417 aa18.88■□□□□ 0.61
TRAM1-201ENST00000262213 SLC20A1Q8WUM9 679 aa18.88■□□□□ 0.61
TRAM1-201ENST00000262213 PLIN4Q96Q06 1357 aa18.88■□□□□ 0.61
TRAM1-201ENST00000262213 KIAA0391O15091 583 aaKnown RBP18.87■□□□□ 0.61
TRAM1-201ENST00000262213 PPP1R12BO60237 982 aaPredicted RBP18.87■□□□□ 0.61
TRAM1-201ENST00000262213 PSMC2P35998 433 aaKnown RBP18.87■□□□□ 0.61
TRAM1-201ENST00000262213 CACNB3P54284 484 aa18.87■□□□□ 0.61
TRAM1-201ENST00000262213 NBPF9Q3BBW0 867 aa18.87■□□□□ 0.61
TRAM1-201ENST00000262213 LACTB2Q53H82 288 aaPredicted RBP18.87■□□□□ 0.61
TRAM1-201ENST00000262213 ZDHHC24Q6UX98 284 aa18.87■□□□□ 0.61
TRAM1-201ENST00000262213 SLC16A3O15427 465 aaKnown RBP18.87■□□□□ 0.61
TRAM1-201ENST00000262213 ATP2B4P23634 1241 aa18.87■□□□□ 0.61
TRAM1-201ENST00000262213 RPL21P46778 160 aaKnown RBP18.87■□□□□ 0.61
TRAM1-201ENST00000262213 LRRC14Q15048 493 aa18.87■□□□□ 0.61
TRAM1-201ENST00000262213 OTUD6AQ7L8S5 288 aa18.87■□□□□ 0.61
TRAM1-201ENST00000262213 FAM163AQ96GL9 167 aaPredicted RBP18.87■□□□□ 0.61
TRAM1-201ENST00000262213 ZNF317Q96PQ6 595 aaPredicted RBP18.87■□□□□ 0.61
TRAM1-201ENST00000262213 STK33Q9BYT3 514 aa18.87■□□□□ 0.61
TRAM1-201ENST00000262213 KDM4CQ9H3R0 1056 aa18.87■□□□□ 0.61
TRAM1-201ENST00000262213 ALG6Q9Y672 507 aa18.87■□□□□ 0.61
TRAM1-201ENST00000262213 EZRP15311 586 aaKnown RBP18.87■□□□□ 0.61
TRAM1-201ENST00000262213 SCP2P22307 547 aa18.87■□□□□ 0.61
TRAM1-201ENST00000262213 ELF3P78545 371 aaPredicted RBP18.87■□□□□ 0.61
TRAM1-201ENST00000262213 TCP10Q12799 353 aa18.87■□□□□ 0.61
TRAM1-201ENST00000262213 MAPK7Q13164 816 aa18.87■□□□□ 0.61
TRAM1-201ENST00000262213 XRCC4Q13426 336 aa18.87■□□□□ 0.61
TRAM1-201ENST00000262213 ATXN2LQ8WWM7 1075 aaKnown RBP18.87■□□□□ 0.61
TRAM1-201ENST00000262213 EIF2AK1Q9BQI3 630 aaKnown RBP18.87■□□□□ 0.61
TRAM1-201ENST00000262213 INTS2Q9H0H0 1204 aaKnown RBP18.87■□□□□ 0.61
TRAM1-201ENST00000262213 ADAM7Q9H2U9 754 aa18.87■□□□□ 0.61
TRAM1-201ENST00000262213 MLXIPLQ9NP71 852 aa18.87■□□□□ 0.61
TRAM1-201ENST00000262213 SAMD15Q9P1V8 674 aa18.87■□□□□ 0.61
TRAM1-201ENST00000262213 NCANO14594 1321 aa18.86■□□□□ 0.61
TRAM1-201ENST00000262213 CCDC169A6NNP5 214 aa18.86■□□□□ 0.61
TRAM1-201ENST00000262213 HGSO14964 777 aaPredicted RBP18.86■□□□□ 0.61
TRAM1-201ENST00000262213 MSH4O15457 936 aa18.86■□□□□ 0.61
TRAM1-201ENST00000262213 ATMINO43313 823 aaPredicted RBP18.86■□□□□ 0.61
TRAM1-201ENST00000262213 ZFPM1Q8IX07 1006 aa18.86■□□□□ 0.61
TRAM1-201ENST00000262213 NAP1L3Q99457 506 aaPredicted RBP18.86■□□□□ 0.61
TRAM1-201ENST00000262213 CARD9Q9H257 536 aa18.86■□□□□ 0.61
TRAM1-201ENST00000262213 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.86■□□□□ 0.612e-6■■□□□ 11.6
TRAM1-201ENST00000262213 RASAL2Q9UJF2 1139 aa18.86■□□□□ 0.61
TRAM1-201ENST00000262213 SUFUQ9UMX1 484 aa18.86■□□□□ 0.61
TRAM1-201ENST00000262213 RPTORQ8N122 1335 aa18.86■□□□□ 0.61
TRAM1-201ENST00000262213 EEF2P13639 858 aaKnown RBP18.86■□□□□ 0.61
TRAM1-201ENST00000262213 ANXA13P27216 316 aa18.86■□□□□ 0.61
TRAM1-201ENST00000262213 MESDQ14696 234 aa18.86■□□□□ 0.61
TRAM1-201ENST00000262213 SLFN13Q68D06 897 aa18.86■□□□□ 0.61
TRAM1-201ENST00000262213 RINT1Q6NUQ1 792 aa18.86■□□□□ 0.61
TRAM1-201ENST00000262213 CPNE8Q86YQ8 564 aa18.86■□□□□ 0.61
TRAM1-201ENST00000262213 CCDC63Q8NA47 563 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms