RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 MEA1Q16626 185 aa24.84■■□□□ 1.57
CDX1-201ENST00000231656 XKR9Q5GH70 373 aa24.84■■□□□ 1.57
CDX1-201ENST00000231656 XKR3Q5GH77 459 aa24.84■■□□□ 1.57
CDX1-201ENST00000231656 PLA2G4FQ68DD2 849 aa24.84■■□□□ 1.57
CDX1-201ENST00000231656 TRIM59Q8IWR1 403 aa24.84■■□□□ 1.57
CDX1-201ENST00000231656 TRIB2Q92519 343 aa24.84■■□□□ 1.57
CDX1-201ENST00000231656 PCMTD1Q96MG8 357 aaPredicted RBP24.84■■□□□ 1.57
CDX1-201ENST00000231656 CCDC43Q96MW1 224 aaKnown RBP24.84■■□□□ 1.57
CDX1-201ENST00000231656 CHP1Q99653 195 aa24.84■■□□□ 1.57
CDX1-201ENST00000231656 ODF2LQ9ULJ1 636 aa24.84■■□□□ 1.57
CDX1-201ENST00000231656 SFI1A8K8P3 1242 aa24.83■■□□□ 1.57
CDX1-201ENST00000231656 PDXKO00764 312 aa24.83■■□□□ 1.57
CDX1-201ENST00000231656 GUCY2CP25092 1073 aa24.83■■□□□ 1.57
CDX1-201ENST00000231656 ADAM9Q13443 819 aa24.83■■□□□ 1.57
CDX1-201ENST00000231656 PPTC7Q8NI37 304 aa24.83■■□□□ 1.57
CDX1-201ENST00000231656 AZI2Q9H6S1 392 aa24.83■■□□□ 1.57
CDX1-201ENST00000231656 PARVGQ9HBI0 331 aa24.83■■□□□ 1.57
CDX1-201ENST00000231656 SEL1LQ9UBV2 794 aa24.83■■□□□ 1.57
CDX1-201ENST00000231656 DNAI1Q9UI46 699 aa24.83■■□□□ 1.57
CDX1-201ENST00000231656 CETN3O15182 167 aa24.82■■□□□ 1.56
CDX1-201ENST00000231656 EIF3DO15371 548 aaKnown RBP eCLIP24.82■■□□□ 1.56
CDX1-201ENST00000231656 GCNT3O95395 438 aa24.82■■□□□ 1.56
CDX1-201ENST00000231656 MYCT1Q8N699 235 aa24.82■■□□□ 1.56
CDX1-201ENST00000231656 FIZ1Q96SL8 496 aa24.82■■□□□ 1.56
CDX1-201ENST00000231656 TYW1Q9NV66 732 aaKnown RBP24.82■■□□□ 1.56
CDX1-201ENST00000231656 SEPT9Q9UHD8 586 aaPredicted RBP24.82■■□□□ 1.56
CDX1-201ENST00000231656 EMSYQ7Z589 1322 aa24.82■■□□□ 1.56
CDX1-201ENST00000231656 OATP04181 439 aa24.82■■□□□ 1.56
CDX1-201ENST00000231656 NR2F2P24468 414 aa24.82■■□□□ 1.56
CDX1-201ENST00000231656 ACRBPQ8NEB7 543 aa24.82■■□□□ 1.56
CDX1-201ENST00000231656 AFG1LQ8WV93 481 aa24.82■■□□□ 1.56
CDX1-201ENST00000231656 TSC1Q92574 1164 aa24.82■■□□□ 1.56
CDX1-201ENST00000231656 GLG1Q92896 1179 aa24.82■■□□□ 1.56
CDX1-201ENST00000231656 L2HGDHQ9H9P8 463 aa24.82■■□□□ 1.56
CDX1-201ENST00000231656 SRRDQ9UH36 339 aa24.82■■□□□ 1.56
CDX1-201ENST00000231656 GNEQ9Y223 722 aaKnown RBP24.82■■□□□ 1.56
CDX1-201ENST00000231656 CALUO43852 315 aaPredicted RBP24.81■■□□□ 1.56
CDX1-201ENST00000231656 HOXD10P28358 340 aa24.81■■□□□ 1.56
CDX1-201ENST00000231656 TSR1Q2NL82 804 aaKnown RBP24.81■■□□□ 1.56
CDX1-201ENST00000231656 MFSD14CQ5VZR4 134 aa24.81■■□□□ 1.56
CDX1-201ENST00000231656 PLPPR4Q7Z2D5 763 aa24.81■■□□□ 1.56
CDX1-201ENST00000231656 TRIM50Q86XT4 487 aa24.81■■□□□ 1.56
CDX1-201ENST00000231656 OR6J1Q8NGC5 347 aa24.81■■□□□ 1.56
CDX1-201ENST00000231656 CEP170P1Q96L14 293 aa24.81■■□□□ 1.56
CDX1-201ENST00000231656 ZMYM2Q9UBW7 1377 aa24.8■■□□□ 1.56
CDX1-201ENST00000231656 A0A0U1RQJ8 604 aa24.8■■□□□ 1.56
CDX1-201ENST00000231656 USO1O60763 962 aaKnown RBP24.8■■□□□ 1.56
CDX1-201ENST00000231656 FKTNO75072 461 aa24.8■■□□□ 1.56
CDX1-201ENST00000231656 MAPK7Q13164 816 aa24.8■■□□□ 1.56
CDX1-201ENST00000231656 ZNF296Q8WUU4 475 aaPredicted RBP24.8■■□□□ 1.56
CDX1-201ENST00000231656 ATRIPQ8WXE1 791 aa24.8■■□□□ 1.56
CDX1-201ENST00000231656 CYP26B1Q9NR63 512 aa24.8■■□□□ 1.56
CDX1-201ENST00000231656 EPN1Q9Y6I3 576 aaPredicted RBP24.8■■□□□ 1.56
CDX1-201ENST00000231656 UBE4BO95155 1302 aa24.8■■□□□ 1.56
CDX1-201ENST00000231656 EPHB6O15197 1021 aa24.8■■□□□ 1.56
CDX1-201ENST00000231656 NMT1P30419 496 aaKnown RBP24.8■■□□□ 1.56
CDX1-201ENST00000231656 KCNMA1Q12791 1236 aa24.8■■□□□ 1.56
CDX1-201ENST00000231656 ERO1AQ96HE7 468 aa24.8■■□□□ 1.56
CDX1-201ENST00000231656 SMARCAD1Q9H4L7 1026 aa24.8■■□□□ 1.56
CDX1-201ENST00000231656 FAM184BQ9ULE4 1060 aa24.8■■□□□ 1.56
CDX1-201ENST00000231656 NDUFA10O95299 355 aa24.79■■□□□ 1.56
CDX1-201ENST00000231656 GNRH1P01148 92 aa24.79■■□□□ 1.56
CDX1-201ENST00000231656 C1QTNF8P60827 252 aa24.79■■□□□ 1.56
CDX1-201ENST00000231656 MAP2K1Q02750 393 aaPredicted RBP24.79■■□□□ 1.56
CDX1-201ENST00000231656 KCNA1Q09470 495 aa24.79■■□□□ 1.56
CDX1-201ENST00000231656 DAW1Q8N136 415 aa24.79■■□□□ 1.56
CDX1-201ENST00000231656 TRPV1Q8NER1 839 aa24.79■■□□□ 1.56
CDX1-201ENST00000231656 ZNF397Q8NF99 534 aaPredicted RBP24.79■■□□□ 1.56
CDX1-201ENST00000231656 NIFKQ9BYG3 293 aaKnown RBP24.79■■□□□ 1.56
CDX1-201ENST00000231656 NRBP2Q9NSY0 501 aa24.79■■□□□ 1.56
CDX1-201ENST00000231656 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.79■■□□□ 1.56
CDX1-201ENST00000231656 DYNC1LI2O43237 492 aaPredicted RBP24.78■■□□□ 1.56
CDX1-201ENST00000231656 TGFB1I1O43294 461 aa24.78■■□□□ 1.56
CDX1-201ENST00000231656 HIP1RO75146 1068 aa24.78■■□□□ 1.56
CDX1-201ENST00000231656 PPFIA4O75335 1185 aa24.78■■□□□ 1.56
CDX1-201ENST00000231656 CYBAP13498 195 aa24.78■■□□□ 1.56
CDX1-201ENST00000231656 HNRNPH3P31942 346 aaKnown RBP24.78■■□□□ 1.56
CDX1-201ENST00000231656 GNG11P61952 73 aa24.78■■□□□ 1.56
CDX1-201ENST00000231656 CDK17Q00537 523 aa24.78■■□□□ 1.56
CDX1-201ENST00000231656 ZNF720Q7Z2F6 126 aa24.78■■□□□ 1.56
CDX1-201ENST00000231656 FRMD5Q7Z6J6 570 aa24.78■■□□□ 1.56
CDX1-201ENST00000231656 CCDC155Q8N6L0 562 aa24.78■■□□□ 1.56
CDX1-201ENST00000231656 LENG1Q96BZ8 264 aaPredicted RBP24.78■■□□□ 1.56
CDX1-201ENST00000231656 WDR24Q96S15 920 aa24.78■■□□□ 1.56
CDX1-201ENST00000231656 MMRN2Q9H8L6 949 aa24.78■■□□□ 1.56
CDX1-201ENST00000231656 FAM207AQ9NSI2 230 aaPredicted RBP24.78■■□□□ 1.56
CDX1-201ENST00000231656 REXO2Q9Y3B8 237 aaKnown RBP24.78■■□□□ 1.56
CDX1-201ENST00000231656 NR3C1P04150 777 aa24.77■■□□□ 1.56
CDX1-201ENST00000231656 LGALS2P05162 132 aa24.77■■□□□ 1.56
CDX1-201ENST00000231656 MARK3P27448 753 aa24.77■■□□□ 1.56
CDX1-201ENST00000231656 SLC26A2P50443 739 aa24.77■■□□□ 1.56
CDX1-201ENST00000231656 MTERF2Q49AM1 385 aa24.77■■□□□ 1.56
CDX1-201ENST00000231656 MAEAQ7L5Y9 396 aa24.77■■□□□ 1.56
CDX1-201ENST00000231656 FAM167AQ96KS9 214 aa24.77■■□□□ 1.56
CDX1-201ENST00000231656 ZNHIT6Q9NWK9 470 aaKnown RBP24.77■■□□□ 1.56
CDX1-201ENST00000231656 MMP3P08254 477 aa24.77■■□□□ 1.56
CDX1-201ENST00000231656 HOXD8P13378 290 aaPredicted RBP24.77■■□□□ 1.56
CDX1-201ENST00000231656 ELNP15502 786 aa24.77■■□□□ 1.56
CDX1-201ENST00000231656 NFIL3Q16649 462 aa24.77■■□□□ 1.56
CDX1-201ENST00000231656 ZC2HC1CQ53FD0 456 aaPredicted RBP24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms