RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 TAF11Q15544 211 aa19.11■□□□□ 0.65
CDKN1B-201ENST00000228872 SLC4A8Q2Y0W8 1093 aa19.11■□□□□ 0.65
CDKN1B-201ENST00000228872 SBK1Q52WX2 424 aa19.11■□□□□ 0.65
CDKN1B-201ENST00000228872 TNFAIP8L3Q5GJ75 292 aa19.11■□□□□ 0.65
CDKN1B-201ENST00000228872 CROCCP2Q86T23 111 aa19.11■□□□□ 0.65
CDKN1B-201ENST00000228872 FBXO25Q8TCJ0 367 aa19.11■□□□□ 0.65
CDKN1B-201ENST00000228872 SNX29Q8TEQ0 813 aa19.11■□□□□ 0.65
CDKN1B-201ENST00000228872 GLG1Q92896 1179 aa19.11■□□□□ 0.65
CDKN1B-201ENST00000228872 TMEM109Q9BVC6 243 aa19.11■□□□□ 0.65
CDKN1B-201ENST00000228872 C6orf50Q9HD87 102 aa19.11■□□□□ 0.65
CDKN1B-201ENST00000228872 FGFR1OP2Q9NVK5 253 aa19.11■□□□□ 0.65
CDKN1B-201ENST00000228872 CNOT7Q9UIV1 285 aaKnown RBP19.11■□□□□ 0.65
CDKN1B-201ENST00000228872 PNMA3Q9UL41 463 aa19.11■□□□□ 0.65
CDKN1B-201ENST00000228872 CDK5RAP2Q96SN8 1893 aa19.11■□□□□ 0.65
CDKN1B-201ENST00000228872 POTEMA6NI47 508 aa19.11■□□□□ 0.65
CDKN1B-201ENST00000228872 AP1G2O75843 785 aa19.11■□□□□ 0.65
CDKN1B-201ENST00000228872 UCHL3P15374 230 aa19.11■□□□□ 0.65
CDKN1B-201ENST00000228872 SLC9A1P19634 815 aa19.11■□□□□ 0.65
CDKN1B-201ENST00000228872 PRKCIP41743 596 aa19.11■□□□□ 0.65
CDKN1B-201ENST00000228872 ATP11AP98196 1134 aa19.11■□□□□ 0.65
CDKN1B-201ENST00000228872 THEMIS2Q5TEJ8 643 aa19.11■□□□□ 0.65
CDKN1B-201ENST00000228872 DCAF12L1Q5VU92 463 aa19.11■□□□□ 0.65
CDKN1B-201ENST00000228872 UHMK1Q8TAS1 419 aaKnown RBP19.11■□□□□ 0.65
CDKN1B-201ENST00000228872 RBM46Q8TBY0 533 aaKnown RBP19.11■□□□□ 0.65
CDKN1B-201ENST00000228872 OSBPL1AQ9BXW6 950 aa19.11■□□□□ 0.65
CDKN1B-201ENST00000228872 ERVK-5Q9HDB9 667 aa19.11■□□□□ 0.65
CDKN1B-201ENST00000228872 TBC1D7Q9P0N9 293 aa19.11■□□□□ 0.65
CDKN1B-201ENST00000228872 NAV1Q8NEY1 1877 aa19.11■□□□□ 0.65
CDKN1B-201ENST00000228872 KIAA0391O15091 583 aaKnown RBP19.1■□□□□ 0.65
CDKN1B-201ENST00000228872 DDX3YO15523 660 aaKnown RBP19.1■□□□□ 0.65
CDKN1B-201ENST00000228872 FESP07332 822 aa19.1■□□□□ 0.65
CDKN1B-201ENST00000228872 SLCO1A2P46721 670 aa19.1■□□□□ 0.65
CDKN1B-201ENST00000228872 TMEM266Q2M3C6 531 aa19.1■□□□□ 0.65
CDKN1B-201ENST00000228872 KIAA1755Q5JYT7 1200 aa19.1■□□□□ 0.65
CDKN1B-201ENST00000228872 JAMLQ86YT9 394 aa19.1■□□□□ 0.65
CDKN1B-201ENST00000228872 KCNV2Q8TDN2 545 aa19.1■□□□□ 0.65
CDKN1B-201ENST00000228872 CCDC113Q9H0I3 377 aa19.1■□□□□ 0.65
CDKN1B-201ENST00000228872 SEMA4AQ9H3S1 761 aa19.1■□□□□ 0.65
CDKN1B-201ENST00000228872 MCM9Q9NXL9 1143 aa19.1■□□□□ 0.65
CDKN1B-201ENST00000228872 PALM3A6NDB9 673 aaPredicted RBP19.1■□□□□ 0.65
CDKN1B-201ENST00000228872 AHCYL1O43865 530 aa19.1■□□□□ 0.65
CDKN1B-201ENST00000228872 PECAM1P16284 738 aaPredicted RBP19.1■□□□□ 0.65
CDKN1B-201ENST00000228872 PPP2R5EQ16537 467 aa19.1■□□□□ 0.65
CDKN1B-201ENST00000228872 BTNL9Q6UXG8 535 aa19.1■□□□□ 0.65
CDKN1B-201ENST00000228872 ADAT2Q7Z6V5 191 aaKnown RBP19.1■□□□□ 0.65
CDKN1B-201ENST00000228872 NAF1Q96HR8 494 aaKnown RBP19.1■□□□□ 0.65
CDKN1B-201ENST00000228872 ZC3H12CQ9C0D7 883 aaKnown RBP19.1■□□□□ 0.65
CDKN1B-201ENST00000228872 STMN4Q9H169 189 aaPredicted RBP19.1■□□□□ 0.65
CDKN1B-201ENST00000228872 CPVLQ9H3G5 476 aa19.1■□□□□ 0.65
CDKN1B-201ENST00000228872 TRIM33Q9UPN9 1127 aa19.1■□□□□ 0.65
CDKN1B-201ENST00000228872 TCP11X1B4DZS4 312 aa19.09■□□□□ 0.65
CDKN1B-201ENST00000228872 WFS1O76024 890 aa19.09■□□□□ 0.65
CDKN1B-201ENST00000228872 GOLGA8HP0CJ92 632 aa19.09■□□□□ 0.65
CDKN1B-201ENST00000228872 ANXA13P27216 316 aa19.09■□□□□ 0.65
CDKN1B-201ENST00000228872 GNA11P29992 359 aa19.09■□□□□ 0.65
CDKN1B-201ENST00000228872 PRPF4BQ13523 1007 aaKnown RBP19.09■□□□□ 0.65
CDKN1B-201ENST00000228872 GRIK5Q16478 980 aa19.09■□□□□ 0.65
CDKN1B-201ENST00000228872 KRT79Q5XKE5 535 aa19.09■□□□□ 0.65
CDKN1B-201ENST00000228872 ANKRD27Q96NW4 1050 aa19.09■□□□□ 0.65
CDKN1B-201ENST00000228872 EYA3Q99504 573 aa19.09■□□□□ 0.65
CDKN1B-201ENST00000228872 INTUQ9ULD6 942 aa19.09■□□□□ 0.65
CDKN1B-201ENST00000228872 GJB6O95452 261 aa19.09■□□□□ 0.65
CDKN1B-201ENST00000228872 USP17L8P0C7I0 530 aa19.09■□□□□ 0.65
CDKN1B-201ENST00000228872 ATP4AP20648 1035 aa19.09■□□□□ 0.65
CDKN1B-201ENST00000228872 CHRNA5P30532 468 aa19.09■□□□□ 0.65
CDKN1B-201ENST00000228872 DRG2P55039 364 aaKnown RBP19.09■□□□□ 0.65
CDKN1B-201ENST00000228872 AUHQ13825 339 aaKnown RBP19.09■□□□□ 0.65
CDKN1B-201ENST00000228872 PLS1Q14651 629 aa19.09■□□□□ 0.65
CDKN1B-201ENST00000228872 DIXDC1Q155Q3 683 aa19.09■□□□□ 0.65
CDKN1B-201ENST00000228872 CCDC38Q502W7 563 aa19.09■□□□□ 0.65
CDKN1B-201ENST00000228872 GRHL1Q9NZI5 618 aa19.09■□□□□ 0.65
CDKN1B-201ENST00000228872 SNED1Q8TER0 1413 aa19.09■□□□□ 0.65
CDKN1B-201ENST00000228872 ZNF646O15015 1829 aaPredicted RBP19.09■□□□□ 0.65
CDKN1B-201ENST00000228872 USP17L3A6NCW0 530 aa19.08■□□□□ 0.65
CDKN1B-201ENST00000228872 USP17L4A6NCW7 530 aa19.08■□□□□ 0.65
CDKN1B-201ENST00000228872 O00370 1275 aa19.08■□□□□ 0.65
CDKN1B-201ENST00000228872 DDX3XO00571 662 aaKnown RBP eCLIP19.08■□□□□ 0.652e-7■■■■□ 20.4
CDKN1B-201ENST00000228872 SLC37A4O43826 429 aa19.08■□□□□ 0.65
CDKN1B-201ENST00000228872 LDHCP07864 332 aa19.08■□□□□ 0.65
CDKN1B-201ENST00000228872 DHX34Q14147 1143 aaKnown RBP19.08■□□□□ 0.65
CDKN1B-201ENST00000228872 LRRC14Q15048 493 aa19.08■□□□□ 0.65
CDKN1B-201ENST00000228872 TAOK1Q7L7X3 1001 aa19.08■□□□□ 0.65
CDKN1B-201ENST00000228872 USP17L1Q7RTZ2 530 aa19.08■□□□□ 0.65
CDKN1B-201ENST00000228872 ZC3H3Q8IXZ2 948 aaKnown RBP19.08■□□□□ 0.65
CDKN1B-201ENST00000228872 TEX9Q8N6V9 391 aa19.08■□□□□ 0.65
CDKN1B-201ENST00000228872 DYDC1Q8WWB3 177 aa19.08■□□□□ 0.65
CDKN1B-201ENST00000228872 KCTD10Q9H3F6 313 aa19.08■□□□□ 0.65
CDKN1B-201ENST00000228872 TMEM260Q9NX78 707 aa19.08■□□□□ 0.65
CDKN1B-201ENST00000228872 BIN2Q9UBW5 565 aaPredicted RBP19.08■□□□□ 0.65
CDKN1B-201ENST00000228872 DBR1Q9UK59 544 aaKnown RBP19.08■□□□□ 0.65
CDKN1B-201ENST00000228872 HDAC9Q9UKV0 1011 aa19.08■□□□□ 0.65
CDKN1B-201ENST00000228872 ARL2BPQ9Y2Y0 163 aa19.08■□□□□ 0.65
CDKN1B-201ENST00000228872 ATAD5Q96QE3 1844 aa19.08■□□□□ 0.65
CDKN1B-201ENST00000228872 EIF4E1BA6NMX2 242 aaKnown RBP19.08■□□□□ 0.64
CDKN1B-201ENST00000228872 PPP4CP60510 307 aa19.08■□□□□ 0.64
CDKN1B-201ENST00000228872 ADAM9Q13443 819 aa19.08■□□□□ 0.64
CDKN1B-201ENST00000228872 ECM1Q16610 540 aa19.08■□□□□ 0.64
CDKN1B-201ENST00000228872 FITM2Q8N6M3 262 aa19.08■□□□□ 0.64
CDKN1B-201ENST00000228872 SH3RF3Q8TEJ3 882 aaPredicted RBP19.08■□□□□ 0.64
CDKN1B-201ENST00000228872 U2AF1L4Q8WU68 220 aaKnown RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms