RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 THEMIS2Q5TEJ8 643 aa17.06■□□□□ 0.32
CACNA1A-221ENST00000636012 C16orf87Q6PH81 154 aa17.06■□□□□ 0.32
CACNA1A-221ENST00000636012 CFAP69A5D8W1 941 aa17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 CARSP49589 748 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 DHX9Q08211 1270 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 NLRP10Q86W26 655 aa17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 BEST2Q8NFU1 509 aa17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 UPF3AQ9H1J1 476 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 FGFR1OP2Q9NVK5 253 aa17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 VCAM1P19320 739 aa17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 CRKP46108 304 aa17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 LBRQ14739 615 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 RPAINQ86UA6 219 aa17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 GPT2Q8TD30 523 aa17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 CCDC90BQ9GZT6 254 aa17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 PEG3Q9GZU2 1588 aa17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 SUN2Q9UH99 717 aa17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 PGBD3Q8N328 593 aa17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 TEX9Q8N6V9 391 aa17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 PHKA2P46019 1235 aa17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 SCINQ9Y6U3 715 aa17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 SSH2Q76I76 1423 aa17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 UBA6A0AVT1 1052 aaPredicted RBP17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 PSMC1P62191 440 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 RAET1EQ8TD07 263 aa17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 TTC17Q96AE7 1141 aa17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 KLHL29Q96CT2 875 aa17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 MASTLQ96GX5 879 aa17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 RRAGDQ9NQL2 400 aaPredicted RBP17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 PCDHA6Q9UN73 950 aa17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 PCDHA8Q9Y5H6 950 aa17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 LDHAP00338 332 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 ESRRAP11474 423 aaPredicted RBP17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 MFSD14CQ5VZR4 134 aa17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 CEP70Q8NHQ1 597 aa17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 VPS39Q96JC1 886 aa17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 RWDD2AQ9UIY3 292 aa17.05■□□□□ 0.32
CACNA1A-221ENST00000636012 PRAMEF22A3QJZ6 481 aa17.04■□□□□ 0.32
CACNA1A-221ENST00000636012 DPCR1Q3MIW9 517 aa17.04■□□□□ 0.32
CACNA1A-221ENST00000636012 PAWRQ96IZ0 340 aaKnown RBP17.04■□□□□ 0.32
CACNA1A-221ENST00000636012 ZMYND12Q9H0C1 365 aa17.04■□□□□ 0.32
CACNA1A-221ENST00000636012 EGFL8Q99944 293 aa17.04■□□□□ 0.32
CACNA1A-221ENST00000636012 ZNF212Q9UDV6 495 aa17.04■□□□□ 0.32
CACNA1A-221ENST00000636012 ARHGEF9O43307 516 aa17.04■□□□□ 0.32
CACNA1A-221ENST00000636012 TBL3Q12788 808 aaKnown RBP17.04■□□□□ 0.32
CACNA1A-221ENST00000636012 E2F5Q15329 346 aa17.04■□□□□ 0.32
CACNA1A-221ENST00000636012 TAF11Q15544 211 aa17.04■□□□□ 0.32
CACNA1A-221ENST00000636012 FAM213AQ9BRX8 229 aa17.04■□□□□ 0.32
CACNA1A-221ENST00000636012 DFFAO00273 331 aa17.04■□□□□ 0.32
CACNA1A-221ENST00000636012 SEC31AO94979 1220 aaKnown RBP17.04■□□□□ 0.32
CACNA1A-221ENST00000636012 SNRNP48Q6IEG0 339 aaKnown RBP17.04■□□□□ 0.32
CACNA1A-221ENST00000636012 PI16Q6UXB8 463 aa17.04■□□□□ 0.32
CACNA1A-221ENST00000636012 BHMT2Q9H2M3 363 aa17.04■□□□□ 0.32
CACNA1A-221ENST00000636012 TDRD3Q9H7E2 651 aaKnown RBP17.04■□□□□ 0.32
CACNA1A-221ENST00000636012 TOPORSQ9NS56 1045 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-221ENST00000636012 UBXN8O00124 270 aa17.04■□□□□ 0.32
CACNA1A-221ENST00000636012 CYFIP1Q7L576 1253 aa17.04■□□□□ 0.32
CACNA1A-221ENST00000636012 KIF24Q5T7B8 1368 aa17.04■□□□□ 0.32
CACNA1A-221ENST00000636012 TTC23LQ6PF05 361 aa17.04■□□□□ 0.32
CACNA1A-221ENST00000636012 FBXO41Q8TF61 875 aa17.04■□□□□ 0.32
CACNA1A-221ENST00000636012 EPAS1Q99814 870 aa17.04■□□□□ 0.32
CACNA1A-221ENST00000636012 OSBPL10Q9BXB5 764 aa17.04■□□□□ 0.32
CACNA1A-221ENST00000636012 ATP6V0A4Q9HBG4 840 aa17.04■□□□□ 0.32
CACNA1A-221ENST00000636012 ZFYVE16Q7Z3T8 1539 aa17.03■□□□□ 0.32
CACNA1A-221ENST00000636012 CCDC195A0A1B0GUA6 201 aa17.03■□□□□ 0.32
CACNA1A-221ENST00000636012 SERPIND1P05546 499 aa17.03■□□□□ 0.32
CACNA1A-221ENST00000636012 CATSPER3Q86XQ3 398 aa17.03■□□□□ 0.32
CACNA1A-221ENST00000636012 VMP1Q96GC9 406 aa17.03■□□□□ 0.32
CACNA1A-221ENST00000636012 SLC39A14Q15043 492 aa17.03■□□□□ 0.32
CACNA1A-221ENST00000636012 SEPT12Q8IYM1 358 aa17.03■□□□□ 0.32
CACNA1A-221ENST00000636012 PDIK1LQ8N165 341 aa17.03■□□□□ 0.32
CACNA1A-221ENST00000636012 CHAMP1Q96JM3 812 aa17.03■□□□□ 0.32
CACNA1A-221ENST00000636012 SAMSN1Q9NSI8 373 aaKnown RBP17.03■□□□□ 0.32
CACNA1A-221ENST00000636012 CPB1P15086 417 aa17.03■□□□□ 0.32
CACNA1A-221ENST00000636012 TNFAIP2Q03169 654 aa17.03■□□□□ 0.32
CACNA1A-221ENST00000636012 OTUD5Q96G74 571 aa17.03■□□□□ 0.32
CACNA1A-221ENST00000636012 PACSIN2Q9UNF0 486 aaPredicted RBP17.03■□□□□ 0.32
CACNA1A-221ENST00000636012 NBPF20Q3BBV1 942 aa17.03■□□□□ 0.32
CACNA1A-221ENST00000636012 NBPF10Q6P3W6 841 aaKnown RBP17.03■□□□□ 0.32
CACNA1A-221ENST00000636012 TTC8Q8TAM2 541 aa17.03■□□□□ 0.32
CACNA1A-221ENST00000636012 SIK2Q9H0K1 926 aa17.03■□□□□ 0.32
CACNA1A-221ENST00000636012 RNF181Q9P0P0 153 aa17.03■□□□□ 0.32
CACNA1A-221ENST00000636012 JAK3P52333 1124 aa17.02■□□□□ 0.32
CACNA1A-221ENST00000636012 EPHB4P54760 987 aa17.02■□□□□ 0.32
CACNA1A-221ENST00000636012 TMEM179Q6ZVK1 233 aa17.02■□□□□ 0.32
CACNA1A-221ENST00000636012 ARMC2Q8NEN0 867 aa17.02■□□□□ 0.32
CACNA1A-221ENST00000636012 SPATA33Q96N06 139 aa17.02■□□□□ 0.32
CACNA1A-221ENST00000636012 SPON2Q9BUD6 331 aa17.02■□□□□ 0.32
CACNA1A-221ENST00000636012 HEMGNQ9BXL5 484 aa17.02■□□□□ 0.32
CACNA1A-221ENST00000636012 COA1Q9GZY4 146 aa17.02■□□□□ 0.32
CACNA1A-221ENST00000636012 LSG1Q9H089 658 aaKnown RBP17.02■□□□□ 0.32
CACNA1A-221ENST00000636012 SAYSD1Q9NPB0 183 aa17.02■□□□□ 0.32
CACNA1A-221ENST00000636012 UBE4BO95155 1302 aa17.02■□□□□ 0.32
CACNA1A-221ENST00000636012 ETF1P62495 437 aaKnown RBP17.02■□□□□ 0.32
CACNA1A-221ENST00000636012 TTLL4Q14679 1199 aa17.02■□□□□ 0.32
CACNA1A-221ENST00000636012 AP1ARQ63HQ0 302 aa17.02■□□□□ 0.32
CACNA1A-221ENST00000636012 SLC26A7Q8TE54 656 aa17.02■□□□□ 0.32
CACNA1A-221ENST00000636012 GRIK1P39086 918 aa17.02■□□□□ 0.32
CACNA1A-221ENST00000636012 CCDC92Q53HC0 331 aaPredicted RBP17.02■□□□□ 0.32
CACNA1A-221ENST00000636012 TMEM270Q6UE05 265 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms