RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 SRP68Q9UHB9 627 aaKnown RBP4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 NOSIPQ9Y314 301 aaKnown RBP4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 PPLO60437 1756 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 NUP155O75694 1391 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 ATXN2Q99700 1313 aaKnown RBP4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 MST1RQ04912 1400 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 TRAPPC8Q9Y2L5 1435 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 CLTCL1P53675 1640 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 ARHGAP10A1A4S6 786 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 USP27XA6NNY8 438 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 CAPN14A8MX76 684 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 H3BRB1 525 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 H7C1W4 665 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 VWA5AO00534 786 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 SASH3O75995 380 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 CDH3P22223 829 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 MAPK8P45983 427 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 CCZ1BP86790 482 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 CCZ1P86791 482 aaPredicted RBP4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 MAP2K5Q13163 448 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 CBLBQ13191 982 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 CASP8Q14790 479 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 MDH1BQ5I0G3 518 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 ERICH5Q6P6B1 374 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 RFX8Q6ZV50 586 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 MILR1Q7Z6M3 343 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 ZER1Q7Z7L7 766 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 GLYCTKQ8IVS8 523 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 SYTL1Q8IYJ3 562 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 CNNM3Q8NE01 707 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 IFT81Q8WYA0 676 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 SHC3Q92529 594 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 HSPH1Q92598 858 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 KIFAP3Q92845 792 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 FAM149B1Q96BN6 582 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 ARL5BQ96KC2 179 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 SLC26A6Q9BXS9 759 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 SCAND2PQ9GZW5 306 aaPredicted RBP4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 BHMT2Q9H2M3 363 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 KCTD10Q9H3F6 313 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 TUT1Q9H6E5 874 aaKnown RBP4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 ELAC1Q9H777 363 aaKnown RBP4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 CCDC177Q9NQR7 707 aaPredicted RBP4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 TMCO1Q9UM00 188 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 RTL1A6NKG5 1358 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 A2MP01023 1474 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 TRPM1Q7Z4N2 1603 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 FAM221BA6H8Z2 402 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 PALM3A6NDB9 673 aaPredicted RBP4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 NOTOA8MTQ0 251 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 MEN1O00255 615 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 RAD51BO15315 384 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 ACTN4O43707 911 aaKnown RBP4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 ATP5BP06576 529 aaKnown RBP4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 PDHBP11177 359 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 ACTN1P12814 892 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 POLR2BP30876 1174 aaKnown RBP4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 ASMTP46597 345 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 FNTAP49354 379 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 KDSRQ06136 332 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 CACNB2Q08289 660 aaPredicted RBP4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 BFSP1Q12934 665 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 EFR3AQ14156 821 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 PPA1Q15181 289 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 C6orf183Q5T699 404 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 KIAA1614Q5VZ46 1190 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 LVRNQ6Q4G3 990 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 PRR23CQ6ZRP0 262 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 PTF1AQ7RTS3 328 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 GALNT7Q86SF2 657 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 APLFQ8IW19 511 aaPredicted RBP4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 PLEKHM2Q8IWE5 1019 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 NUP93Q8N1F7 819 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 SSH1Q8WYL5 1049 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 SGK3Q96BR1 496 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 MS4A4AQ96JQ5 239 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 CNDP1Q96KN2 507 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 ZBED2Q9BTP6 218 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 LSM14BQ9BX40 385 aaKnown RBP4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 CARD6Q9BX69 1037 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 CEP44Q9C0F1 390 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 ATP6V0A4Q9HBG4 840 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 ZSWIM6Q9HCJ5 1215 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 PDE11AQ9HCR9 933 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 HPF1Q9NWY4 346 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 AFF4Q9UHB7 1163 aaKnown RBP4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 DUSP12Q9UNI6 340 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 AXIN2Q9Y2T1 843 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 MYOM2P54296 1465 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 MYO5BQ9ULV0 1848 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 A8MVJ9 347 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 UBAP1LF5GYI3 381 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 ZBTB14O43829 449 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 SURF6O75683 361 aaKnown RBP4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 GAS8O95995 478 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 ALAS2P22557 587 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 VAMP1P23763 118 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 HAAOP46952 286 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 NR2C2P49116 596 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 SERPINB8P50452 374 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms