RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 CPA4Q9UI42 421 aa12.75□□□□□ -0.37
LINC00538-201ENST00000626109 MYH6P13533 1939 aa12.75□□□□□ -0.37
LINC00538-201ENST00000626109 BAZ2BQ9UIF8 2168 aaKnown RBP12.75□□□□□ -0.37
LINC00538-201ENST00000626109 COL11A1P12107 1806 aaPredicted RBP12.74□□□□□ -0.37
LINC00538-201ENST00000626109 BOLA2-SMG1P6H3BVE0 249 aa12.74□□□□□ -0.37
LINC00538-201ENST00000626109 PEX10O60683 326 aa12.74□□□□□ -0.37
LINC00538-201ENST00000626109 SLC25A27O95847 323 aa12.74□□□□□ -0.37
LINC00538-201ENST00000626109 TAL1P17542 331 aaPredicted RBP12.74□□□□□ -0.37
LINC00538-201ENST00000626109 CBX1P83916 185 aa12.74□□□□□ -0.37
LINC00538-201ENST00000626109 ARMCX5Q6P1M9 558 aa12.74□□□□□ -0.37
LINC00538-201ENST00000626109 LVRNQ6Q4G3 990 aa12.74□□□□□ -0.37
LINC00538-201ENST00000626109 FCHSD1Q86WN1 690 aa12.74□□□□□ -0.37
LINC00538-201ENST00000626109 TRIML1Q8N9V2 468 aa12.74□□□□□ -0.37
LINC00538-201ENST00000626109 MLKLQ8NB16 471 aa12.74□□□□□ -0.37
LINC00538-201ENST00000626109 SCLT1Q96NL6 688 aa12.74□□□□□ -0.37
LINC00538-201ENST00000626109 TRERF1Q96PN7 1200 aa12.74□□□□□ -0.37
LINC00538-201ENST00000626109 POLR3CQ9BUI4 534 aaPredicted RBP12.74□□□□□ -0.37
LINC00538-201ENST00000626109 SRRTQ9BXP5 876 aaKnown RBP12.74□□□□□ -0.37
LINC00538-201ENST00000626109 MOV10L1Q9BXT6 1211 aaKnown RBP12.74□□□□□ -0.37
LINC00538-201ENST00000626109 GTPBP4Q9BZE4 634 aaKnown RBP12.74□□□□□ -0.37
LINC00538-201ENST00000626109 RNF146Q9NTX7 359 aa12.74□□□□□ -0.37
LINC00538-201ENST00000626109 RNF186Q9NXI6 227 aa12.74□□□□□ -0.37
LINC00538-201ENST00000626109 CDV3Q9UKY7 258 aaKnown RBP12.74□□□□□ -0.37
LINC00538-201ENST00000626109 ZSCAN12O43309 604 aa12.74□□□□□ -0.37
LINC00538-201ENST00000626109 HNRNPCP07910 306 aaKnown RBP eCLIP12.74□□□□□ -0.37
LINC00538-201ENST00000626109 BCRP11274 1271 aa12.74□□□□□ -0.37
LINC00538-201ENST00000626109 UBA7P41226 1012 aa12.74□□□□□ -0.37
LINC00538-201ENST00000626109 MAPK8P45983 427 aa12.74□□□□□ -0.37
LINC00538-201ENST00000626109 NLRP5P59047 1200 aa12.74□□□□□ -0.37
LINC00538-201ENST00000626109 BPIFB3P59826 476 aa12.74□□□□□ -0.37
LINC00538-201ENST00000626109 SLC20A2Q08357 652 aa12.74□□□□□ -0.37
LINC00538-201ENST00000626109 PNOCQ13519 176 aa12.74□□□□□ -0.37
LINC00538-201ENST00000626109 CT47A1Q5JQC4 288 aaPredicted RBP12.74□□□□□ -0.37
LINC00538-201ENST00000626109 UTP14CQ5TAP6 766 aaKnown RBP12.74□□□□□ -0.37
LINC00538-201ENST00000626109 C17orf99Q6UX52 265 aa12.74□□□□□ -0.37
LINC00538-201ENST00000626109 NCAPG2Q86XI2 1143 aa12.74□□□□□ -0.37
LINC00538-201ENST00000626109 DIS3L2Q8IYB7 885 aaKnown RBP12.74□□□□□ -0.37
LINC00538-201ENST00000626109 SHCBP1Q8NEM2 672 aa12.74□□□□□ -0.37
LINC00538-201ENST00000626109 CHST13Q8NET6 341 aa12.74□□□□□ -0.37
LINC00538-201ENST00000626109 SPAG5Q96R06 1193 aa12.74□□□□□ -0.37
LINC00538-201ENST00000626109 C2orf49Q9BVC5 232 aaPredicted RBP12.74□□□□□ -0.37
LINC00538-201ENST00000626109 ACAD9Q9H845 621 aa12.74□□□□□ -0.37
LINC00538-201ENST00000626109 FBXO40Q9UH90 709 aa12.74□□□□□ -0.37
LINC00538-201ENST00000626109 ESYT2A0FGR8 921 aa12.73□□□□□ -0.37
LINC00538-201ENST00000626109 TRPA1O75762 1119 aa12.73□□□□□ -0.37
LINC00538-201ENST00000626109 F2P00734 622 aa12.73□□□□□ -0.37
LINC00538-201ENST00000626109 PTPREP23469 700 aa12.73□□□□□ -0.37
LINC00538-201ENST00000626109 CALML3P27482 149 aa12.73□□□□□ -0.37
LINC00538-201ENST00000626109 GNA11P29992 359 aa12.73□□□□□ -0.37
LINC00538-201ENST00000626109 DAB2P98082 770 aa12.73□□□□□ -0.37
LINC00538-201ENST00000626109 E4F1Q66K89 784 aaPredicted RBP12.73□□□□□ -0.37
LINC00538-201ENST00000626109 ISM2Q6H9L7 571 aa12.73□□□□□ -0.37
LINC00538-201ENST00000626109 TYW1BQ6NUM6 668 aa12.73□□□□□ -0.37
LINC00538-201ENST00000626109 MMS22LQ6ZRQ5 1243 aa12.73□□□□□ -0.37
LINC00538-201ENST00000626109 PHC3Q8NDX5 983 aa12.73□□□□□ -0.37
LINC00538-201ENST00000626109 ZNF397Q8NF99 534 aaPredicted RBP12.73□□□□□ -0.37
LINC00538-201ENST00000626109 PPP1R13BQ96KQ4 1090 aa12.73□□□□□ -0.37
LINC00538-201ENST00000626109 CLIC6Q96NY7 704 aa12.73□□□□□ -0.37
LINC00538-201ENST00000626109 CFHR5Q9BXR6 569 aa12.73□□□□□ -0.37
LINC00538-201ENST00000626109 GLT8D2Q9H1C3 349 aa12.73□□□□□ -0.37
LINC00538-201ENST00000626109 MROH8Q9H579 483 aa12.73□□□□□ -0.37
LINC00538-201ENST00000626109 BRMS1Q9HCU9 246 aa12.73□□□□□ -0.37
LINC00538-201ENST00000626109 C6orf50Q9HD87 102 aa12.73□□□□□ -0.37
LINC00538-201ENST00000626109 MKS1Q9NXB0 559 aa12.73□□□□□ -0.37
LINC00538-201ENST00000626109 SAGE1Q9NXZ1 904 aa12.73□□□□□ -0.37
LINC00538-201ENST00000626109 XPO7Q9UIA9 1087 aaKnown RBP12.73□□□□□ -0.37
LINC00538-201ENST00000626109 RIPK3Q9Y572 518 aa12.73□□□□□ -0.37
LINC00538-201ENST00000626109 PCDHA5Q9Y5H7 936 aa12.73□□□□□ -0.37
LINC00538-201ENST00000626109 MORC2Q9Y6X9 1032 aaPredicted RBP12.73□□□□□ -0.37
LINC00538-201ENST00000626109 SMCO2A6NFE2 343 aa12.72□□□□□ -0.37
LINC00538-201ENST00000626109 BTBD18B2RXH4 712 aa12.72□□□□□ -0.37
LINC00538-201ENST00000626109 TBC1D8O95759 1140 aa12.72□□□□□ -0.37
LINC00538-201ENST00000626109 BMP15O95972 392 aa12.72□□□□□ -0.37
LINC00538-201ENST00000626109 IL4RP24394 825 aa12.72□□□□□ -0.37
LINC00538-201ENST00000626109 ADCY7P51828 1080 aa12.72□□□□□ -0.37
LINC00538-201ENST00000626109 SLMAPQ14BN4 828 aa12.72□□□□□ -0.37
LINC00538-201ENST00000626109 FXNQ16595 210 aa12.72□□□□□ -0.37
LINC00538-201ENST00000626109 GALNT17Q6IS24 598 aa12.72□□□□□ -0.37
LINC00538-201ENST00000626109 CUL5Q93034 780 aa12.72□□□□□ -0.37
LINC00538-201ENST00000626109 SMARCE1Q969G3 411 aa12.72□□□□□ -0.37
LINC00538-201ENST00000626109 EIF2AK1Q9BQI3 630 aaKnown RBP12.72□□□□□ -0.37
LINC00538-201ENST00000626109 ZMYND12Q9H0C1 365 aa12.72□□□□□ -0.37
LINC00538-201ENST00000626109 PSTPIP2Q9H939 334 aa12.72□□□□□ -0.37
LINC00538-201ENST00000626109 KCNJ14Q9UNX9 436 aa12.72□□□□□ -0.37
LINC00538-201ENST00000626109 SNX5Q9Y5X3 404 aa12.72□□□□□ -0.37
LINC00538-201ENST00000626109 GOLGA6L9A6NEM1 432 aa12.72□□□□□ -0.37
LINC00538-201ENST00000626109 H0Y3Z8 333 aa12.72□□□□□ -0.37
LINC00538-201ENST00000626109 DNAJB2P25686 324 aa12.72□□□□□ -0.37
LINC00538-201ENST00000626109 MRPL12P52815 198 aaKnown RBP12.72□□□□□ -0.37
LINC00538-201ENST00000626109 POSTNQ15063 836 aa12.72□□□□□ -0.37
LINC00538-201ENST00000626109 MUM1L1Q5H9M0 696 aa12.72□□□□□ -0.37
LINC00538-201ENST00000626109 NT5DC1Q5TFE4 455 aa12.72□□□□□ -0.37
LINC00538-201ENST00000626109 DDX42Q86XP3 938 aaKnown RBP eCLIP12.72□□□□□ -0.37
LINC00538-201ENST00000626109 ZNF354CQ86Y25 554 aa12.72□□□□□ -0.37
LINC00538-201ENST00000626109 VSTM4Q8IW00 320 aa12.72□□□□□ -0.37
LINC00538-201ENST00000626109 PHF20Q9BVI0 1012 aa12.72□□□□□ -0.37
LINC00538-201ENST00000626109 TSKSQ9UJT2 592 aa12.72□□□□□ -0.37
LINC00538-201ENST00000626109 ZNF215Q9UL58 517 aaPredicted RBP12.72□□□□□ -0.37
LINC00538-201ENST00000626109 SRPRBQ9Y5M8 271 aaKnown RBP12.72□□□□□ -0.37
LINC00538-201ENST00000626109 NFIBO00712 420 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms