RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 SLC17A8Q8NDX2 589 aa17.2■□□□□ 0.34
NR1H3-235ENST00000616973 NSUN6Q8TEA1 469 aaKnown RBP17.2■□□□□ 0.34
NR1H3-235ENST00000616973 DRC1Q96MC2 740 aa17.2■□□□□ 0.34
NR1H3-235ENST00000616973 IKZF4Q9H2S9 585 aa17.2■□□□□ 0.34
NR1H3-235ENST00000616973 FHOD1Q9Y613 1164 aa17.2■□□□□ 0.34
NR1H3-235ENST00000616973 CAPN6Q9Y6Q1 641 aa17.2■□□□□ 0.34
NR1H3-235ENST00000616973 A0A0G2JMZ2 1700 aa17.2■□□□□ 0.34
NR1H3-235ENST00000616973 K7ENM7 598 aa17.19■□□□□ 0.34
NR1H3-235ENST00000616973 STAM2O75886 525 aa17.19■□□□□ 0.34
NR1H3-235ENST00000616973 TFRCP02786 760 aaKnown RBP17.19■□□□□ 0.34
NR1H3-235ENST00000616973 LMNB1P20700 586 aa17.19■□□□□ 0.34
NR1H3-235ENST00000616973 HIRAP54198 1017 aaPredicted RBP17.19■□□□□ 0.34
NR1H3-235ENST00000616973 TMEM132BQ14DG7 1078 aa17.19■□□□□ 0.34
NR1H3-235ENST00000616973 SYCP3Q8IZU3 236 aa17.19■□□□□ 0.34
NR1H3-235ENST00000616973 KRT222Q8N1A0 295 aa17.19■□□□□ 0.34
NR1H3-235ENST00000616973 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.19■□□□□ 0.34
NR1H3-235ENST00000616973 HNRNPLLQ8WVV9 542 aaKnown RBP17.19■□□□□ 0.34
NR1H3-235ENST00000616973 ACCSQ96QU6 501 aa17.19■□□□□ 0.34
NR1H3-235ENST00000616973 SPAG5Q96R06 1193 aa17.19■□□□□ 0.34
NR1H3-235ENST00000616973 TEX13BQ9BXU2 312 aa17.19■□□□□ 0.34
NR1H3-235ENST00000616973 MLXIPQ9HAP2 919 aa17.19■□□□□ 0.34
NR1H3-235ENST00000616973 HOXC10Q9NYD6 342 aa17.19■□□□□ 0.34
NR1H3-235ENST00000616973 GCNT4Q9P109 453 aa17.19■□□□□ 0.34
NR1H3-235ENST00000616973 OTOFQ9HC10 1997 aa17.19■□□□□ 0.34
NR1H3-235ENST00000616973 MYH9P35579 1960 aaKnown RBP17.19■□□□□ 0.34
NR1H3-235ENST00000616973 MOCS3O95396 460 aa17.19■□□□□ 0.34
NR1H3-235ENST00000616973 FMO5P49326 533 aa17.19■□□□□ 0.34
NR1H3-235ENST00000616973 GTF2BQ00403 316 aa17.19■□□□□ 0.34
NR1H3-235ENST00000616973 UGCGQ16739 394 aa17.19■□□□□ 0.34
NR1H3-235ENST00000616973 MOV10L1Q9BXT6 1211 aaKnown RBP17.19■□□□□ 0.34
NR1H3-235ENST00000616973 ACAD9Q9H845 621 aa17.19■□□□□ 0.34
NR1H3-235ENST00000616973 SNX12Q9UMY4 172 aa17.19■□□□□ 0.34
NR1H3-235ENST00000616973 NFASCO94856 1347 aa17.18■□□□□ 0.34
NR1H3-235ENST00000616973 BTNL10A8MVZ5 291 aa17.18■□□□□ 0.34
NR1H3-235ENST00000616973 PNMA6AP0CW24 399 aaPredicted RBP17.18■□□□□ 0.34
NR1H3-235ENST00000616973 CYP2J2P51589 502 aa17.18■□□□□ 0.34
NR1H3-235ENST00000616973 RBM46Q8TBY0 533 aaKnown RBP17.18■□□□□ 0.34
NR1H3-235ENST00000616973 CDHR1Q96JP9 859 aa17.18■□□□□ 0.34
NR1H3-235ENST00000616973 CCDC43Q96MW1 224 aaKnown RBP17.18■□□□□ 0.34
NR1H3-235ENST00000616973 NOX5Q96PH1 765 aa17.18■□□□□ 0.34
NR1H3-235ENST00000616973 ARFGAP3Q9NP61 516 aa17.18■□□□□ 0.34
NR1H3-235ENST00000616973 CYP39A1Q9NYL5 469 aa17.18■□□□□ 0.34
NR1H3-235ENST00000616973 FZD1Q9UP38 647 aa17.18■□□□□ 0.34
NR1H3-235ENST00000616973 PCDHA10Q9Y5I2 948 aa17.18■□□□□ 0.34
NR1H3-235ENST00000616973 A0A087X0T9 212 aa17.17■□□□□ 0.34
NR1H3-235ENST00000616973 BACH1O14867 736 aa17.17■□□□□ 0.34
NR1H3-235ENST00000616973 DKC1O60832 514 aaKnown RBP eCLIP17.17■□□□□ 0.34
NR1H3-235ENST00000616973 FAM228BP0C875 321 aa17.17■□□□□ 0.34
NR1H3-235ENST00000616973 NAB2Q15742 525 aa17.17■□□□□ 0.34
NR1H3-235ENST00000616973 ZNF572Q7Z3I7 529 aaPredicted RBP17.17■□□□□ 0.34
NR1H3-235ENST00000616973 SMAP1Q8IYB5 467 aaPredicted RBP17.17■□□□□ 0.34
NR1H3-235ENST00000616973 IWS1Q96ST2 819 aa17.17■□□□□ 0.34
NR1H3-235ENST00000616973 MMS19Q96T76 1030 aa17.17■□□□□ 0.34
NR1H3-235ENST00000616973 SALL4Q9UJQ4 1053 aa17.17■□□□□ 0.34
NR1H3-235ENST00000616973 SPDYE16A6NNV3 312 aaPredicted RBP17.17■□□□□ 0.34
NR1H3-235ENST00000616973 MAPK13O15264 365 aa17.17■□□□□ 0.34
NR1H3-235ENST00000616973 SRGAP2O75044 1071 aa17.17■□□□□ 0.34
NR1H3-235ENST00000616973 USP2O75604 605 aaPredicted RBP17.17■□□□□ 0.34
NR1H3-235ENST00000616973 KCNA2P16389 499 aa17.17■□□□□ 0.34
NR1H3-235ENST00000616973 TCP1P17987 556 aaKnown RBP17.17■□□□□ 0.34
NR1H3-235ENST00000616973 NCKAP1LP55160 1127 aa17.17■□□□□ 0.34
NR1H3-235ENST00000616973 MCCD1P59942 119 aaPredicted RBP17.17■□□□□ 0.34
NR1H3-235ENST00000616973 BFSP1Q12934 665 aa17.17■□□□□ 0.34
NR1H3-235ENST00000616973 GPIHBP1Q8IV16 184 aa17.17■□□□□ 0.34
NR1H3-235ENST00000616973 HVCN1Q96D96 273 aa17.17■□□□□ 0.34
NR1H3-235ENST00000616973 ADAMTS1Q9UHI8 967 aa17.17■□□□□ 0.34
NR1H3-235ENST00000616973 TSKSQ9UJT2 592 aa17.17■□□□□ 0.34
NR1H3-235ENST00000616973 EXOC3O60645 756 aa17.16■□□□□ 0.34
NR1H3-235ENST00000616973 GFPT2O94808 682 aa17.16■□□□□ 0.34
NR1H3-235ENST00000616973 FERP16591 822 aa17.16■□□□□ 0.34
NR1H3-235ENST00000616973 ARID5AQ03989 594 aa17.16■□□□□ 0.34
NR1H3-235ENST00000616973 PTK2Q05397 1052 aa17.16■□□□□ 0.34
NR1H3-235ENST00000616973 ITIH3Q06033 890 aa17.16■□□□□ 0.34
NR1H3-235ENST00000616973 XKR9Q5GH70 373 aa17.16■□□□□ 0.34
NR1H3-235ENST00000616973 IQCEQ6IPM2 695 aa17.16■□□□□ 0.34
NR1H3-235ENST00000616973 MAEAQ7L5Y9 396 aa17.16■□□□□ 0.34
NR1H3-235ENST00000616973 HAUS6Q7Z4H7 955 aa17.16■□□□□ 0.34
NR1H3-235ENST00000616973 FMNL3Q8IVF7 1028 aa17.16■□□□□ 0.34
NR1H3-235ENST00000616973 NOA1Q8NC60 698 aaKnown RBP17.16■□□□□ 0.34
NR1H3-235ENST00000616973 A1CFQ9NQ94 594 aaKnown RBP17.16■□□□□ 0.34
NR1H3-235ENST00000616973 HYOU1Q9Y4L1 999 aa17.16■□□□□ 0.34
NR1H3-235ENST00000616973 RGS20O76081 388 aa17.15■□□□□ 0.34
NR1H3-235ENST00000616973 INTS8Q75QN2 995 aaKnown RBP17.15■□□□□ 0.34
NR1H3-235ENST00000616973 OTUD6AQ7L8S5 288 aa17.15■□□□□ 0.34
NR1H3-235ENST00000616973 ZNF571Q7Z3V5 609 aaPredicted RBP17.15■□□□□ 0.34
NR1H3-235ENST00000616973 PNKPQ96T60 521 aa17.15■□□□□ 0.34
NR1H3-235ENST00000616973 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.15■□□□□ 0.34
NR1H3-235ENST00000616973 AJAP1Q9UKB5 411 aaPredicted RBP17.15■□□□□ 0.34
NR1H3-235ENST00000616973 NENFQ9UMX5 172 aa17.15■□□□□ 0.34
NR1H3-235ENST00000616973 ERLIN1O75477 346 aa17.15■□□□□ 0.34
NR1H3-235ENST00000616973 SEC31AO94979 1220 aaKnown RBP17.15■□□□□ 0.34
NR1H3-235ENST00000616973 TBC1D8O95759 1140 aa17.15■□□□□ 0.34
NR1H3-235ENST00000616973 KRT13P13646 458 aa17.15■□□□□ 0.34
NR1H3-235ENST00000616973 RFX1P22670 979 aa17.15■□□□□ 0.34
NR1H3-235ENST00000616973 STAT1P42224 750 aa17.15■□□□□ 0.34
NR1H3-235ENST00000616973 WDR93Q6P2C0 686 aa17.15■□□□□ 0.34
NR1H3-235ENST00000616973 CHST13Q8NET6 341 aa17.15■□□□□ 0.34
NR1H3-235ENST00000616973 ATP6V0A1Q93050 837 aa17.15■□□□□ 0.34
NR1H3-235ENST00000616973 C17orf75Q9HAS0 396 aa17.15■□□□□ 0.34
NR1H3-235ENST00000616973 SNCAIPQ9Y6H5 919 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms